Wenju Cui

Yilin Leng, Wenju Cui, Bai Chen et al.

Prediction the conversion to early-stage dementia is critical for mitigating its progression but remains challenging due to subtle cognitive impairments and structural brain changes. Traditional T1-weighted magnetic resonance imaging (T1-MRI) research focus on identifying brain atrophy regions but often fails to address the intricate connectivity between them. This limitation underscores the necessity of focuing on inter-regional connectivity for a comprehensive understand of the brain's complex network. Moreover, there is a pressing demand for methods that adaptively preserve and extract critical information, particularly specialized subgraph mining techniques for brain networks. These are essential for developing high-quality feature representations that reveal critical spatial impacts of structural brain changes and its topology. In this paper, we propose Brain-SubGNN, a novel graph representation network to mine and enhance critical subgraphs based on T1-MRI. This network provides a subgraph-level interpretation, enhancing interpretability and insights for graph analysis. The process begins by extracting node features and a correlation matrix between nodes to construct a task-oriented brain network. Brain-SubGNN then adaptively identifies and enhances critical subgraphs, capturing both loop and neighbor subgraphs. This method reflects the loop topology and local changes, indicative of long-range connections, and maintains local and global brain attributes. Extensive experiments validate the effectiveness and advantages of Brain-SubGNN, demonstrating its potential as a powerful tool for understanding and diagnosing early-stage dementia. Source code is available at https://github.com/Leng-10/Brain-SubGNN.

Yilin Leng, Wenju Cui, Chen Bai et al.

Constructing structural brain networks using T1-weighted magnetic resonance imaging (T1-MRI) presents a significant challenge due to the lack of direct regional connectivity information. Current methods with T1-MRI rely on predefined regions or isolated pretrained location modules to obtain atrophic regions, which neglects individual specificity. Besides, existing methods capture global structural context only on the whole-image-level, which weaken correlation between regions and the hierarchical distribution nature of brain connectivity.We hereby propose a novel dynamic structural brain network construction method based on T1-MRI, which can dynamically localize critical regions and constrain the hierarchical distribution among them for constructing dynamic structural brain network. Specifically, we first cluster spatially-correlated channel and generate several critical brain regions as prototypes. Further, we introduce a contrastive loss function to constrain the prototypes distribution, which embed the hierarchical brain semantic structure into the latent space. Self-attention and GCN are then used to dynamically construct hierarchical correlations of critical regions for brain network and explore the correlation, respectively. Our method is evaluated on ADNI-1 and ADNI-2 databases for mild cognitive impairment (MCI) conversion prediction, and acheive the state-of-the-art (SOTA) performance. Our source code is available at http://github.com/*******.

Jiangang Hao, Wenju Cui, Patrick Kyllonen et al.

Collaborative problem solving (CPS) is widely recognized as a critical 21st-century skill. Assessing CPS depends heavily on coding the communication data using a construct-relevant framework, and this process has long been a major bottleneck to scaling up such assessments. Based on five datasets and two coding frameworks, we demonstrate that ChatGPT can code communication data to a satisfactory level, though performance varies across ChatGPT models, and depends on the coding framework and task characteristics. Interestingly, newer reasoning-focused models such as GPT-o1-mini and GPT-o3-mini do not necessarily yield better coding results. Additionally, we show that refining prompts based on feedback from miscoded cases can improve coding accuracy in some instances, though the effectiveness of this approach is not consistent across all tasks. These findings offer practical guidance for researchers and practitioners in developing scalable, efficient methods to analyze communication data in support of 21st-century skill assessment.

Jiangang Hao, Wenju Cui, Patrick Kyllonen et al.

Assessing communication and collaboration at scale depends on a labor intensive task of coding communication data into categories according to different frameworks. Prior research has established that ChatGPT can be directly instructed with coding rubrics to code the communication data and achieves accuracy comparable to human raters. However, whether the coding from ChatGPT or similar AI technology exhibits bias against different demographic groups, such as gender and race, remains unclear. To fill this gap, this paper investigates ChatGPT-based automated coding of communication data using a typical coding framework for collaborative problem solving, examining differences across gender and racial groups. The analysis draws on data from three types of collaborative tasks: negotiation, problem solving, and decision making. Our results show that ChatGPT-based coding exhibits no significant bias across gender and racial groups, paving the road for its adoption in large-scale assessment of collaboration and communication.

Haoxuan Zhang, Wenju Cui, Yuzhu Cao et al.

The segmentation of mass lesions in digital breast tomosynthesis (DBT) images is very significant for the early screening of breast cancer. However, the high-density breast tissue often leads to high concealment of the mass lesions, which makes manual annotation difficult and time-consuming. As a result, there is a lack of annotated data for model training. Diffusion models are commonly used for data augmentation, but the existing methods face two challenges. First, due to the high concealment of lesions, it is difficult for the model to learn the features of the lesion area. This leads to the low generation quality of the lesion areas, thus limiting the quality of the generated images. Second, existing methods can only generate images and cannot generate corresponding annotations, which restricts the usability of the generated images in supervised training. In this work, we propose a paired image generation method. The method does not require external conditions and can achieve the generation of paired images by training an extra diffusion guider for the conditional diffusion model. During the experimental phase, we generated paired DBT slices and mass lesion masks. Then, we incorporated them into the supervised training process of the mass lesion segmentation task. The experimental results show that our method can improve the generation quality without external conditions. Moreover, it contributes to alleviating the shortage of annotated data, thus enhancing the performance of downstream tasks.

Wenju Cui, Caiying Yan, Zhuangzhi Yan et al.

FDG-PET reveals altered brain metabolism in individuals with mild cognitive impairment (MCI) and Alzheimer's disease (AD). Some biomarkers derived from FDG-PET by computer-aided-diagnosis (CAD) technologies have been proved that they can accurately diagnosis normal control (NC), MCI, and AD. However, the studies of identification of early MCI (EMCI) and late MCI (LMCI) with FDG-PET images are still insufficient. Compared with studies based on fMRI and DTI images, the researches of the inter-region representation features in FDG-PET images are insufficient. Moreover, considering the variability in different individuals, some hard samples which are very similar with both two classes limit the classification performance. To tackle these problems, in this paper, we propose a novel bilinear pooling and metric learning network (BMNet), which can extract the inter-region representation features and distinguish hard samples by constructing embedding space. To validate the proposed method, we collect 998 FDG-PET images from ADNI. Following the common preprocessing steps, 90 features are extracted from each FDG-PET image according to the automatic anatomical landmark (AAL) template and then sent into the proposed network. Extensive 5-fold cross-validation experiments are performed for multiple two-class classifications. Experiments show that most metrics are improved after adding the bilinear pooling module and metric losses to the Baseline model respectively. Specifically, in the classification task between EMCI and LMCI, the specificity improves 6.38% after adding the triple metric loss, and the negative predictive value (NPV) improves 3.45% after using the bilinear pooling module.