Yuan-Sen Ting

D. Huppenkothen, M. Ntampaka, M. Ho et al. · princeton

Machine learning has rapidly become a tool of choice for the astronomical community. It is being applied across a wide range of wavelengths and problems, from the classification of transients to neural network emulators of cosmological simulations, and is shifting paradigms about how we generate and report scientific results. At the same time, this class of method comes with its own set of best practices, challenges, and drawbacks, which, at present, are often reported on incompletely in the astrophysical literature. With this paper, we aim to provide a primer to the astronomical community, including authors, reviewers, and editors, on how to implement machine learning models and report their results in a way that ensures the accuracy of the results, reproducibility of the findings, and usefulness of the method.

Tuan Dung Nguyen, Yuan-Sen Ting, Ioana Ciucă et al.

Large language models excel in many human-language tasks but often falter in highly specialized domains like scholarly astronomy. To bridge this gap, we introduce AstroLLaMA, a 7-billion-parameter model fine-tuned from LLaMA-2 using over 300,000 astronomy abstracts from arXiv. Optimized for traditional causal language modeling, AstroLLaMA achieves a 30% lower perplexity than Llama-2, showing marked domain adaptation. Our model generates more insightful and scientifically relevant text completions and embedding extraction than state-of-the-arts foundation models despite having significantly fewer parameters. AstroLLaMA serves as a robust, domain-specific model with broad fine-tuning potential. Its public release aims to spur astronomy-focused research, including automatic paper summarization and conversational agent development.

Ioana Ciucă, Yuan-Sen Ting, Sandor Kruk et al.

This study investigates the application of Large Language Models (LLMs), specifically GPT-4, within Astronomy. We employ in-context prompting, supplying the model with up to 1000 papers from the NASA Astrophysics Data System, to explore the extent to which performance can be improved by immersing the model in domain-specific literature. Our findings point towards a substantial boost in hypothesis generation when using in-context prompting, a benefit that is further accentuated by adversarial prompting. We illustrate how adversarial prompting empowers GPT-4 to extract essential details from a vast knowledge base to produce meaningful hypotheses, signaling an innovative step towards employing LLMs for scientific research in Astronomy.

Charles O'Neill, Jack Miller, Ioana Ciuca et al.

In this paper, we tackle the emerging challenge of unintended harmful content generation in Large Language Models (LLMs) with a novel dual-stage optimisation technique using adversarial fine-tuning. Our two-pronged approach employs an adversarial model, fine-tuned to generate potentially harmful prompts, and a judge model, iteratively optimised to discern these prompts. In this adversarial cycle, the two models seek to outperform each other in the prompting phase, generating a dataset of rich examples which are then used for fine-tuning. This iterative application of prompting and fine-tuning allows continuous refinement and improved performance. The performance of our approach is evaluated through classification accuracy on a dataset consisting of problematic prompts not detected by GPT-4, as well as a selection of contentious but unproblematic prompts. We show considerable increase in classification accuracy of the judge model on this challenging dataset as it undergoes the optimisation process. Furthermore, we show that a rudimentary model \texttt{ada} can achieve 13\% higher accuracy on the hold-out test set than GPT-4 after only a few rounds of this process, and that this fine-tuning improves performance in parallel tasks such as toxic comment identification.

Ioana Ciucă, Yuan-Sen Ting

We demonstrate the potential of the state-of-the-art OpenAI GPT-4 large language model to engage in meaningful interactions with Astronomy papers using in-context prompting. To optimize for efficiency, we employ a distillation technique that effectively reduces the size of the original input paper by 50\%, while maintaining the paragraph structure and overall semantic integrity. We then explore the model's responses using a multi-document context (ten distilled documents). Our findings indicate that GPT-4 excels in the multi-document domain, providing detailed answers contextualized within the framework of related research findings. Our results showcase the potential of large language models for the astronomical community, offering a promising avenue for further exploration, particularly the possibility of utilizing the models for hypothesis generation.

Jiashu Pan, Yuan-Sen Ting, Jie Yu

We introduce Astroconformer, a Transformer-based model to analyze stellar light curves from the Kepler mission. We demonstrate that Astrconformer can robustly infer the stellar surface gravity as a supervised task. Importantly, as Transformer captures long-range information in the time series, it outperforms the state-of-the-art data-driven method in the field, and the critical role of self-attention is proved through ablation experiments. Furthermore, the attention map from Astroconformer exemplifies the long-range correlation information learned by the model, leading to a more interpretable deep learning approach for asteroseismology. Besides data from Kepler, we also show that the method can generalize to sparse cadence light curves from the Rubin Observatory, paving the way for the new era of asteroseismology, harnessing information from long-cadence ground-based observations.

Charles O'Neill, Yuan-Sen Ting, Ioana Ciuca et al.

Large Language Models (LLMs) hold immense potential to generate synthetic data of high quality and utility, which has numerous applications from downstream model training to practical data utilisation. However, contemporary models, despite their impressive capacities, consistently struggle to produce both coherent and diverse data. To address the coherency issue, we introduce contrastive expert guidance, where the difference between the logit distributions of fine-tuned and base language models is emphasised to ensure domain adherence. In order to ensure diversity, we utilise existing real and synthetic examples as negative prompts to the model. We deem this dual-pronged approach to logit reshaping as STEER: Semantic Text Enhancement via Embedding Repositioning. STEER operates at inference-time and systematically guides the LLMs to strike a balance between adherence to the data distribution (ensuring semantic fidelity) and deviation from prior synthetic examples or existing real datasets (ensuring diversity and authenticity). This delicate balancing act is achieved by dynamically moving towards or away from chosen representations in the latent space. STEER demonstrates improved performance over previous synthetic data generation techniques, exhibiting better balance between data diversity and coherency across three distinct tasks: hypothesis generation, toxic and non-toxic comment generation, and commonsense reasoning task generation. We demonstrate how STEER allows for fine-tuned control over the diversity-coherency trade-off via its hyperparameters, highlighting its versatility.

Yuan-Sen Ting, Tuan Dung Nguyen, Tirthankar Ghosal et al.

We present a comprehensive evaluation of proprietary and open-weights large language models using the first astronomy-specific benchmarking dataset. This dataset comprises 4,425 multiple-choice questions curated from the Annual Review of Astronomy and Astrophysics, covering a broad range of astrophysical topics. Our analysis examines model performance across various astronomical subfields and assesses response calibration, crucial for potential deployment in research environments. Claude-3.5-Sonnet outperforms competitors by up to 4.6 percentage points, achieving 85.0% accuracy. For proprietary models, we observed a universal reduction in cost every 3-to-12 months to achieve similar score in this particular astronomy benchmark. open-weights models have rapidly improved, with LLaMA-3-70b (80.6%) and Qwen-2-72b (77.7%) now competing with some of the best proprietary models. We identify performance variations across topics, with non-English-focused models generally struggling more in exoplanet-related fields, stellar astrophysics, and instrumentation related questions. These challenges likely stem from less abundant training data, limited historical context, and rapid recent developments in these areas. This pattern is observed across both open-weights and proprietary models, with regional dependencies evident, highlighting the impact of training data diversity on model performance in specialized scientific domains. Top-performing models demonstrate well-calibrated confidence, with correlations above 0.9 between confidence and correctness, though they tend to be slightly underconfident. The development for fast, low-cost inference of open-weights models presents new opportunities for affordable deployment in astronomy. The rapid progress observed suggests that LLM-driven research in astronomy may become feasible in the near future.

Ernest Perkowski, Rui Pan, Tuan Dung Nguyen et al.

We explore the potential of enhancing LLM performance in astronomy-focused question-answering through targeted, continual pre-training. By employing a compact 7B-parameter LLaMA-2 model and focusing exclusively on a curated set of astronomy corpora -- comprising abstracts, introductions, and conclusions -- we achieve notable improvements in specialized topic comprehension. While general LLMs like GPT-4 excel in broader question-answering scenarios due to superior reasoning capabilities, our findings suggest that continual pre-training with limited resources can still enhance model performance on specialized topics. Additionally, we present an extension of AstroLLaMA: the fine-tuning of the 7B LLaMA model on a domain-specific conversational dataset, culminating in the release of the chat-enabled AstroLLaMA for community use. Comprehensive quantitative benchmarking is currently in progress and will be detailed in an upcoming full paper. The model, AstroLLaMA-Chat, is now available at https://huggingface.co/universeTBD, providing the first open-source conversational AI tool tailored for the astronomy community.

Rui Pan, Tuan Dung Nguyen, Hardik Arora et al.

Continual pretraining of large language models on domain-specific data has been proposed to enhance performance on downstream tasks. In astronomy, the previous absence of astronomy-focused benchmarks has hindered objective evaluation of these specialized LLM models. Leveraging a recent initiative to curate high-quality astronomical MCQs, this study aims to quantitatively assess specialized LLMs in astronomy. We find that the previously released AstroLLaMA series, based on LLaMA-2-7B, underperforms compared to the base model. We demonstrate that this performance degradation can be partially mitigated by utilizing high-quality data for continual pretraining, such as summarized text from arXiv. Despite the observed catastrophic forgetting in smaller models, our results indicate that continual pretraining on the 70B model can yield significant improvements. However, the current supervised fine-tuning dataset still constrains the performance of instruct models. In conjunction with this study, we introduce a new set of models, AstroLLaMA-3-8B and AstroLLaMA-2-70B, building upon the previous AstroLLaMA series.

Yuwei Yang, Zeyu Zhang, Yunzhong Hou et al.

Being able to effectively read scientific plots, or chart understanding, is a central part toward building effective agents for science. However, existing multimodal large language models (MLLMs), especially open-source ones, are still falling behind with a typical success rate of 30%-50% on challenging benchmarks. Previous studies on fine-tuning MLLMs with synthetic charts are often restricted by their inadequate similarity to the real charts, which could compromise model training and performance on complex real-world charts. In this study, we show that modularizing chart generation and diversifying visual details improves chart understanding capabilities. In particular, we design a five-step data synthesis pipeline, where we separate data and function creation for single plot generation, condition the generation of later subplots on earlier ones for multi-subplot figures, visually diversify the generated figures, filter out low quality data, and finally generate the question-answer (QA) pairs with GPT-4o. This approach allows us to streamline the generation of fine-tuning datasets and introduce the effective chart dataset (ECD), which contains 10k+ chart images and 300k+ QA pairs, covering 25 topics and featuring 250+ chart type combinations with high visual complexity. We show that ECD consistently improves the performance of various MLLMs on a range of real-world and synthetic test sets. Code, data and models are available at: https://github.com/yuweiyang-anu/ECD.

Jia-Shu Pan, Yuan-Sen Ting, Jie Yu

Stellar light curves contain valuable information about oscillations and granulation, offering insights into stars' internal structures and evolutionary states. Traditional asteroseismic techniques, primarily focused on power spectral analysis, often overlook the crucial phase information in these light curves. Addressing this gap, recent machine learning applications, particularly those using Convolutional Neural Networks (CNNs), have made strides in inferring stellar properties from light curves. However, CNNs are limited by their localized feature extraction capabilities. In response, we introduce $\textit{Astroconformer}$, a Transformer-based deep learning framework, specifically designed to capture long-range dependencies in stellar light curves. Our empirical analysis centers on estimating surface gravity ($\log g$), using a dataset derived from single-quarter Kepler light curves with $\log g$ values ranging from 0.2 to 4.4. $\textit{Astroconformer}$ demonstrates superior performance, achieving a root-mean-square-error (RMSE) of 0.017 dex at $\log g\approx3$ in data-rich regimes and up to 0.1 dex in sparser areas. This performance surpasses both K-nearest neighbor models and advanced CNNs. Ablation studies highlight the influence of receptive field size on model effectiveness, with larger fields correlating to improved results. $\textit{Astroconformer}$ also excels in extracting $ν_{\max}$ with high precision. It achieves less than 2% relative median absolute error for 90-day red giant light curves. Notably, the error remains under 3% for 30-day light curves, whose oscillations are undetectable by a conventional pipeline in 30% cases. Furthermore, the attention mechanisms in $\textit{Astroconformer}$ align closely with the characteristics of stellar oscillations and granulation observed in light curves.

Yuan-Sen Ting, André Curtis-Trudel, Siyu Yao

Artificial intelligence is rapidly transforming astronomical research, yet the scientific community has largely treated this transformation as an engineering challenge rather than an epistemological one. This perspective article argues that philosophy of science offers essential tools for navigating AI's integration into astronomy--conceptual clarity about what "understanding" means, critical examination of assumptions about data and discovery, and frameworks for evaluating AI's roles across different research contexts. Drawing on an interdisciplinary workshop convening astronomers, philosophers, and computer scientists, we identify several tensions. First, the narrative that AI will "derive fundamental physics" from data misconstrues contemporary astronomy as equation-derivation rather than the observation-driven enterprise it is. Second, scientific understanding involves more than prediction--it requires narrative construction, contextual judgment, and communicative achievement that current AI architectures struggle to provide. Third, because narrative and judgment matter, human peer review remains essential--yet AI-generated content flooding the literature threatens our capacity to identify genuine insight. Fourth, while AI excels at well-defined problem-solving, the ill-defined problem-finding that drives breakthroughs appears to require capacities beyond pattern recognition. Fifth, as AI accelerates what is feasible, pursuitworthiness criteria risk shifting toward what AI makes easy rather than what is genuinely important. We propose "pragmatic understanding" as a framework for integration--recognizing AI as a tool that extends human cognition while requiring new norms for validation and epistemic evaluation. Engaging with these questions now may help the community shape the transformation rather than merely react to it.

Franck Cappello, Sandeep Madireddy, Robert Underwood et al.

Recent advancements have positioned AI, and particularly Large Language Models (LLMs), as transformative tools for scientific research, capable of addressing complex tasks that require reasoning, problem-solving, and decision-making. Their exceptional capabilities suggest their potential as scientific research assistants but also highlight the need for holistic, rigorous, and domain-specific evaluation to assess effectiveness in real-world scientific applications. This paper describes a multifaceted methodology for Evaluating AI models as scientific Research Assistants (EAIRA) developed at Argonne National Laboratory. This methodology incorporates four primary classes of evaluations. 1) Multiple Choice Questions to assess factual recall; 2) Open Response to evaluate advanced reasoning and problem-solving skills; 3) Lab-Style Experiments involving detailed analysis of capabilities as research assistants in controlled environments; and 4) Field-Style Experiments to capture researcher-LLM interactions at scale in a wide range of scientific domains and applications. These complementary methods enable a comprehensive analysis of LLM strengths and weaknesses with respect to their scientific knowledge, reasoning abilities, and adaptability. Recognizing the rapid pace of LLM advancements, we designed the methodology to evolve and adapt so as to ensure its continued relevance and applicability. This paper describes the methodology state at the end of February 2025. Although developed within a subset of scientific domains, the methodology is designed to be generalizable to a wide range of scientific domains.

Lucas Carrit Delgado Pinheiro, Ziru Chen, Bruno Caixeta Piazza et al.

While task-specific demonstrations show early success in applying large language models (LLMs) to automate some astronomical research tasks, they only provide incomplete views of all necessary capabilities in solving astronomy problems, calling for more thorough understanding of LLMs' strengths and limitations. So far, existing benchmarks and evaluations focus on simple question-answering that primarily tests astronomical knowledge and fails to evaluate the complex reasoning required for real-world research in the discipline. Here, we address this gap by systematically benchmarking five state-of-the-art LLMs on the International Olympiad on Astronomy and Astrophysics (IOAA) exams, which are designed to examine deep conceptual understanding, multi-step derivations, and multimodal analysis. With average scores of 85.6% and 84.2%, Gemini 2.5 Pro and GPT-5 (the two top-performing models) not only achieve gold medal level performance but also rank in the top two among ~200-300 participants in all four IOAA theory exams evaluated (2022-2025). In comparison, results on the data analysis exams show more divergence. GPT-5 still excels in the exams with an 88.5% average score, ranking top 10 among the participants in the four most recent IOAAs, while other models' performances drop to 48-76%. Furthermore, our in-depth error analysis underscores conceptual reasoning, geometric reasoning, and spatial visualization (52-79% accuracy) as consistent weaknesses among all LLMs. Hence, although LLMs approach peak human performance in theory exams, critical gaps must be addressed before they can serve as autonomous research agents in astronomy.

Tomasz Różański, Yuan-Sen Ting

Neural network-based emulators for the inference of stellar parameters and elemental abundances represent an increasingly popular methodology in modern spectroscopic surveys. However, these approaches are often constrained by their emulation precision and domain transfer capabilities. Greater generalizability has previously been achieved only with significantly larger model architectures, as demonstrated by Transformer-based models in natural language processing. This observation aligns with neural scaling laws, where model performance predictably improves with increased model size, computational resources allocated to model training, and training data volume. In this study, we demonstrate that these scaling laws also apply to Transformer-based spectral emulators in astronomy. Building upon our previous work with TransformerPayne and incorporating Maximum Update Parametrization techniques from natural language models, we provide training guidelines for scaling models to achieve optimal performance. Our results show that within the explored parameter space, clear scaling relationships emerge. These findings suggest that optimal computational resource allocation requires balanced scaling. Specifically, given a tenfold increase in training compute, achieving an optimal seven-fold reduction in mean squared error necessitates an approximately 2.5-fold increase in dataset size and a 3.8-fold increase in model size. This study establishes a foundation for developing spectral foundational models with enhanced domain transfer capabilities.

Qiufan Lin, Hengxin Ruan, Dominique Fouchez et al.

Obtaining well-calibrated photometric redshift probability densities for galaxies without a spectroscopic measurement remains a challenge. Deep learning discriminative models, typically fed with multi-band galaxy images, can produce outputs that mimic probability densities and achieve state-of-the-art accuracy. However, such models may be affected by miscalibration that would result in discrepancies between the model outputs and the actual distributions of true redshifts. Our work develops a novel method called the Contrastive Learning and Adaptive KNN for Photometric Redshift (CLAP) that resolves this issue. It leverages supervised contrastive learning (SCL) and k-nearest neighbours (KNN) to construct and calibrate raw probability density estimates, and implements a refitting procedure to resume end-to-end discriminative models ready to produce final estimates for large-scale imaging data. The harmonic mean is adopted to combine an ensemble of estimates from multiple realisations for improving accuracy. Our experiments demonstrate that CLAP takes advantage of both deep learning and KNN, outperforming benchmark methods on the calibration of probability density estimates and retaining high accuracy and computational efficiency. With reference to CLAP, we point out that miscalibration is particularly sensitive to the method-induced excessive correlations among data instances in addition to the unaccounted-for epistemic uncertainties. Reducing the uncertainties may not guarantee the removal of miscalibration due to the presence of such excessive correlations, yet this is a problem for conventional deep learning methods rather than CLAP. These discussions underscore the robustness of CLAP for obtaining photometric redshift probability densities required by astrophysical and cosmological applications. This is the first paper in our series on CLAP.

Wei Zhang, Qiufan Lin, Yuan-Sen Ting et al.

End-to-end deep learning models fed with multi-band galaxy images are powerful data-driven tools used to estimate galaxy physical properties in the absence of spectroscopy. However, due to a lack of interpretability and the associational nature of such models, it is difficult to understand how the information that is included in addition to integrated photometry (e.g., morphology) contributes to the estimation task. Improving our understanding in this field would enable further advances into unraveling the physical connections among galaxy properties and optimizing data exploitation. Therefore, our work is aimed at interpreting the deep learning-based estimation of stellar mass via two interpretability techniques: causal analysis and mutual information decomposition. The former reveals the causal paths between multiple variables beyond nondirectional statistical associations, while the latter quantifies the multicomponent contributions (i.e., redundant, unique, and synergistic) of different input data to the stellar mass estimation. Using data from the Sloan Digital Sky Survey (SDSS) and the Wide-field Infrared Survey Explorer (WISE), we obtained meaningful results that provide physical interpretations for image-based models. Our work demonstrates the gains from combining deep learning with interpretability techniques, and holds promise in promoting more data-driven astrophysical research (e.g., astrophysical parameter estimations and investigations on complex multivariate physical processes).

Andrew Ferguson, Marisa LaFleur, Lars Ruthotto et al. · stanford

This community paper developed out of the NSF Workshop on the Future of Artificial Intelligence (AI) and the Mathematical and Physics Sciences (MPS), which was held in March 2025 with the goal of understanding how the MPS domains (Astronomy, Chemistry, Materials Research, Mathematical Sciences, and Physics) can best capitalize on, and contribute to, the future of AI. We present here a summary and snapshot of the MPS community's perspective, as of Spring/Summer 2025, in a rapidly developing field. The link between AI and MPS is becoming increasingly inextricable; now is a crucial moment to strengthen the link between AI and Science by pursuing a strategy that proactively and thoughtfully leverages the potential of AI for scientific discovery and optimizes opportunities to impact the development of AI by applying concepts from fundamental science. To achieve this, we propose activities and strategic priorities that: (1) enable AI+MPS research in both directions; (2) build up an interdisciplinary community of AI+MPS researchers; and (3) foster education and workforce development in AI for MPS researchers and students. We conclude with a summary of suggested priorities for funding agencies, educational institutions, and individual researchers to help position the MPS community to be a leader in, and take full advantage of, the transformative potential of AI+MPS.

Yuan-Sen Ting

This textbook provides a systematic treatment of statistical machine learning for astronomical research through the lens of Bayesian inference, developing a unified framework that reveals connections between modern data analysis techniques and traditional statistical methods. We show how these techniques emerge from familiar statistical foundations. The consistently Bayesian perspective prioritizes uncertainty quantification and statistical rigor essential for scientific inference in astronomy. The textbook progresses from probability theory and Bayesian inference through supervised learning including linear regression with measurement uncertainties, logistic regression, and classification. Unsupervised learning topics cover Principal Component Analysis and clustering methods. We then introduce computational techniques through sampling and Markov Chain Monte Carlo, followed by Gaussian Processes as probabilistic nonparametric methods and neural networks within the broader statistical context. Our theory-focused pedagogical approach derives each method from first principles with complete mathematical development, emphasizing statistical insight and complementing with astronomical applications. We prioritize understanding why algorithms work, when they are appropriate, and how they connect to broader statistical principles. The treatment builds toward modern techniques including neural networks through a solid foundation in classical methods and their theoretical underpinnings. This foundation enables thoughtful application of these methods to astronomical research, ensuring proper consideration of assumptions, limitations, and uncertainty propagation essential for advancing astronomical knowledge in the era of large astronomical surveys.

Sankalp Gilda, Stark C. Draper, Sebastien Fabbro et al.

We leverage state-of-the-art machine learning methods and a decade's worth of archival data from CFHT to predict observatory image quality (IQ) from environmental conditions and observatory operating parameters. Specifically, we develop accurate and interpretable models of the complex dependence between data features and observed IQ for CFHT's wide-field camera, MegaCam. Our contributions are several-fold. First, we collect, collate and reprocess several disparate data sets gathered by CFHT scientists. Second, we predict probability distribution functions (PDFs) of IQ and achieve a mean absolute error of $\sim0.07''$ for the predicted medians. Third, we explore the data-driven actuation of the 12 dome "vents" installed in 2013-14 to accelerate the flushing of hot air from the dome. We leverage epistemic and aleatoric uncertainties in conjunction with probabilistic generative modeling to identify candidate vent adjustments that are in-distribution (ID); for the optimal configuration for each ID sample, we predict the reduction in required observing time to achieve a fixed SNR. On average, the reduction is $\sim12\%$. Finally, we rank input features by their Shapley values to identify the most predictive variables for each observation. Our long-term goal is to construct reliable and real-time models that can forecast optimal observatory operating parameters to optimize IQ. We can then feed such forecasts into scheduling protocols and predictive maintenance routines. We anticipate that such approaches will become standard in automating observatory operations and maintenance by the time CFHT's successor, the Maunakea Spectroscopic Explorer, is installed in the next decade.

Teaghan O'Briain, Yuan-Sen Ting, Sébastien Fabbro et al.

We discuss how to achieve mapping from large sets of imperfect simulations and observational data with unsupervised domain adaptation. Under the hypothesis that simulated and observed data distributions share a common underlying representation, we show how it is possible to transfer between simulated and observed domains. Driven by an application to interpret stellar spectroscopic sky surveys, we construct the domain transfer pipeline from two adversarial autoencoders on each domains with a disentangling latent space, and a cycle-consistency constraint. We then construct a differentiable pipeline from physical stellar parameters to realistic observed spectra, aided by a supplementary generative surrogate physics emulator network. We further exemplify the potential of the method on the reconstructed spectra quality and to discover new spectral features associated to elemental abundances.