Andrew I. Cooper

LG
h-index43
7papers
48citations
Novelty43%
AI Score44

7 Papers

ROSep 29, 2022
Accelerating Laboratory Automation Through Robot Skill Learning For Sample Scraping

Gabriella Pizzuto, Hetong Wang, Hatem Fakhruldeen et al.

The use of laboratory robotics for autonomous experiments offers an attractive route to alleviate scientists from tedious tasks while accelerating material discovery for topical issues such as climate change and pharmaceuticals. While some experimental workflows can already benefit from automation, sample preparation is still carried out manually due to the high level of motor function and dexterity required when dealing with different tools, chemicals, and glassware. A fundamental workflow in chemical fields is crystallisation, where one application is polymorph screening, i.e., obtaining a three dimensional molecular structure from a crystal. For this process, it is of utmost importance to recover as much of the sample as possible since synthesising molecules is both costly in time and money. To this aim, chemists scrape vials to retrieve sample contents prior to imaging plate transfer. Automating this process is challenging as it goes beyond robotic insertion tasks due to a fundamental requirement of having to execute fine-granular movements within a constrained environment (sample vial). Motivated by how human chemists carry out this process of scraping powder from vials, our work proposes a model-free reinforcement learning method for learning a scraping policy, leading to a fully autonomous sample scraping procedure. We first create a scenario-specific simulation environment with a Panda Franka Emika robot using a laboratory scraper that is inserted into a simulated vial, to demonstrate how a scraping policy can be learned successfully in simulation. We then train and evaluate our method on a real robotic manipulator in laboratory settings, and show that our method can autonomously scrape powder across various setups.

CVMar 18, 2022
SOLIS: Autonomous Solubility Screening using Deep Neural Networks

Gabriella Pizzuto, Jacopo de Berardinis, Louis Longley et al.

Accelerating material discovery has tremendous societal and industrial impact, particularly for pharmaceuticals and clean energy production. Many experimental instruments have some degree of automation, facilitating continuous running and higher throughput. However, it is common that sample preparation is still carried out manually. This can result in researchers spending a significant amount of their time on repetitive tasks, which introduces errors and can prohibit production of statistically relevant data. Crystallisation experiments are common in many chemical fields, both for purification and in polymorph screening experiments. The initial step often involves a solubility screen of the molecule; that is, understanding whether molecular compounds have dissolved in a particular solvent. This usually can be time consuming and work intensive. Moreover, accurate knowledge of the precise solubility limit of the molecule is often not required, and simply measuring a threshold of solubility in each solvent would be sufficient. To address this, we propose a novel cascaded deep model that is inspired by how a human chemist would visually assess a sample to determine whether the solid has completely dissolved in the solution. In this paper, we design, develop, and evaluate the first fully autonomous solubility screening framework, which leverages state-of-the-art methods for image segmentation and convolutional neural networks for image classification. To realise that, we first create a dataset comprising different molecules and solvents, which is collected in a real-world chemistry laboratory. We then evaluated our method on the data recorded through an eye-in-hand camera mounted on a seven degree-of-freedom robotic manipulator, and show that our model can achieve 99.13% test accuracy across various setups.

LGAug 22, 2023
HypBO: Accelerating Black-Box Scientific Experiments Using Experts' Hypotheses

Abdoulatif Cisse, Xenophon Evangelopoulos, Sam Carruthers et al.

Robotics and automation offer massive accelerations for solving intractable, multivariate scientific problems such as materials discovery, but the available search spaces can be dauntingly large. Bayesian optimization (BO) has emerged as a popular sample-efficient optimization engine, thriving in tasks where no analytic form of the target function/property is known. Here, we exploit expert human knowledge in the form of hypotheses to direct Bayesian searches more quickly to promising regions of chemical space. Previous methods have used underlying distributions derived from existing experimental measurements, which is unfeasible for new, unexplored scientific tasks. Also, such distributions cannot capture intricate hypotheses. Our proposed method, which we call HypBO, uses expert human hypotheses to generate improved seed samples. Unpromising seeds are automatically discounted, while promising seeds are used to augment the surrogate model data, thus achieving better-informed sampling. This process continues in a global versus local search fashion, organized in a bilevel optimization framework. We validate the performance of our method on a range of synthetic functions and demonstrate its practical utility on a real chemical design task where the use of expert hypotheses accelerates the search performance significantly.

6.3ROMar 11
Human-Aware Robot Behaviour in Self-Driving Labs

Satheeshkumar Veeramani, Anna Kisil, Abigail Bentley et al.

Self-driving laboratories (SDLs) are rapidly transforming research in chemistry and materials science to accelerate new discoveries. Mobile robot chemists (MRCs) play a pivotal role by autonomously navigating the lab to transport samples, effectively connecting synthesis, analysis, and characterisation equipment. The instruments within an SDL are typically designed or retrofitted to be accessed by both human and robotic chemists, ensuring operational flexibility and integration between manual and automated workflows. In many scenarios, human and robotic chemists may need to use the same equipment simultaneously. Currently, MRCs rely on simple LiDAR-based obstruction detection, which forces the robot to passively wait if a human is present. This lack of situational awareness leads to unnecessary delays and inefficient coordination in time-critical automated workflows in human-robot shared labs. To address this, we present an initial study of an embodied, AI-driven perception method that facilitates proactive human-robot interaction in shared-access scenarios. Our method features a hierarchical human intention prediction model that allows the robot to distinguish between preparatory actions (waiting) and transient interactions (accessing the instrument). Our results demonstrate that the proposed approach enhances efficiency by enabling proactive human-robot interaction, streamlining coordination, and potentially increasing the efficiency of autonomous scientific labs.

LGJan 27, 2025
Language-Based Bayesian Optimization Research Assistant (BORA)

Abdoulatif Cissé, Xenophon Evangelopoulos, Vladimir V. Gusev et al.

Many important scientific problems involve multivariate optimization coupled with slow and laborious experimental measurements. These complex, high-dimensional searches can be defined by non-convex optimization landscapes that resemble needle-in-a-haystack surfaces, leading to entrapment in local minima. Contextualizing optimizers with human domain knowledge is a powerful approach to guide searches to localized fruitful regions. However, this approach is susceptible to human confirmation bias and it is also challenging for domain experts to keep track of the rapidly expanding scientific literature. Here, we propose the use of Large Language Models (LLMs) for contextualizing Bayesian optimization (BO) via a hybrid optimization framework that intelligently and economically blends stochastic inference with domain knowledge-based insights from the LLM, which is used to suggest new, better-performing areas of the search space for exploration. Our method fosters user engagement by offering real-time commentary on the optimization progress, explaining the reasoning behind the search strategies. We validate the effectiveness of our approach on synthetic benchmarks with up to 15 independent variables and demonstrate the ability of LLMs to reason in four real-world experimental tasks where context-aware suggestions boost optimization performance substantially.

ROAug 7, 2025
Chemist Eye: A Visual Language Model-Powered System for Safety Monitoring and Robot Decision-Making in Self-Driving Laboratories

Francisco Munguia-Galeano, Zhengxue Zhou, Satheeshkumar Veeramani et al.

The integration of robotics and automation into self-driving laboratories (SDLs) can introduce additional safety complexities, in addition to those that already apply to conventional research laboratories. Personal protective equipment (PPE) is an essential requirement for ensuring the safety and well-being of workers in laboratories, self-driving or otherwise. Fires are another important risk factor in chemical laboratories. In SDLs, fires that occur close to mobile robots, which use flammable lithium batteries, could have increased severity. Here, we present Chemist Eye, a distributed safety monitoring system designed to enhance situational awareness in SDLs. The system integrates multiple stations equipped with RGB, depth, and infrared cameras, designed to monitor incidents in SDLs. Chemist Eye is also designed to spot workers who have suffered a potential accident or medical emergency, PPE compliance and fire hazards. To do this, Chemist Eye uses decision-making driven by a vision-language model (VLM). Chemist Eye is designed for seamless integration, enabling real-time communication with robots. Based on the VLM recommendations, the system attempts to drive mobile robots away from potential fire locations, exits, or individuals not wearing PPE, and issues audible warnings where necessary. It also integrates with third-party messaging platforms to provide instant notifications to lab personnel. We tested Chemist Eye with real-world data from an SDL equipped with three mobile robots and found that the spotting of possible safety hazards and decision-making performances reached 97 % and 95 %, respectively.

LGOct 23, 2025
L^2M^3OF: A Large Language Multimodal Model for Metal-Organic Frameworks

Jiyu Cui, Fang Wu, Haokai Zhao et al.

Large language models have demonstrated remarkable reasoning capabilities across diverse natural language tasks. However, comparable breakthroughs in scientific discovery are more limited, because understanding complex physical phenomena demands multifaceted representations far beyond language alone. A compelling example is the design of functional materials such as MOFs-critical for a range of impactful applications like carbon capture and hydrogen storage. Navigating their vast and intricate design space in language-based representations interpretable by LLMs is challenging due to the numerous possible three-dimensional atomic arrangements and strict reticular rules of coordination geometry and topology. Despite promising early results in LLM-assisted discovery for simpler materials systems, MOF design remains heavily reliant on tacit human expertise rarely codified in textual information alone. To overcome this barrier, we introduce L2M3OF, the first multimodal LLM for MOFs. L2M3OF integrates crystal representation learning with language understanding to process structural, textual, and knowledge modalities jointly. L2M3OF employs a pre-trained crystal encoder with a lightweight projection layer to compress structural information into a token space, enabling efficient alignment with language instructions. To facilitate training and evaluation, we curate a structure-property-knowledge database of crystalline materials and benchmark L2M3OF against state-of-the-art closed-source LLMs such as GPT-5, Gemini-2.5-Pro and DeepSeek-R1. Experiments show that L2M3OF outperforms leading text-based closed-source LLMs in property prediction and knowledge generation tasks, despite using far fewer parameters. These results highlight the importance of multimodal approaches for porous material understanding and establish L2M3OF as a foundation for next-generation AI systems in materials discovery.