29.5LGJun 2
HiSE: A Lightweight Hierarchical Semantic Explainer for Heterogeneous Graph Neural NetworksZongrui Li, Yuhang Zhao, Ying Zhao et al.
Heterogeneous graph neural networks (HGNNs) have demonstrated remarkable performance in modeling complex relational data, however their interpretability in high-stakes applications remains a critical challenge. Existing explanation methods suffer from two major limitations: on the one hand, the generated explanations fail to reflect the inherent semantic hierarchy of HGNNs, resulting in a lack of fidelity to the model's internal decision-making mechanism; on the other hand, feature explanations often rely on complex search or perturbation mechanisms, leading to excessive computational complexity and poor efficiency. To address these issues, we propose HiSE, a lightweight feature-oriented interpretable model for HGNNs. HiSE achieves semantically aware feature explanations through hierarchical semantic modeling: at the semantic level, local surrogate models based on the Least Absolute Shrinkage and Selection Operator (LASSO) are employed to learn sparse feature representations under each semantic view; at the cross-semantic level, the contributions of different semantic views are adaptively characterized via KL divergence to produce a unified explanation. Extensive experiments demonstrate that HiSE outperforms existing methods in terms of fidelity, robustness, and cross-semantic explanation capability, while its lightweight framework incurs low computational overhead, enabling efficient application to large-scale, complex real-world heterogeneous graphs.
LGAug 31, 2023Code
BenchTemp: A General Benchmark for Evaluating Temporal Graph Neural NetworksQiang Huang, Jiawei Jiang, Xi Susie Rao et al. · eth-zurich
To handle graphs in which features or connectivities are evolving over time, a series of temporal graph neural networks (TGNNs) have been proposed. Despite the success of these TGNNs, the previous TGNN evaluations reveal several limitations regarding four critical issues: 1) inconsistent datasets, 2) inconsistent evaluation pipelines, 3) lacking workload diversity, and 4) lacking efficient comparison. Overall, there lacks an empirical study that puts TGNN models onto the same ground and compares them comprehensively. To this end, we propose BenchTemp, a general benchmark for evaluating TGNN models on various workloads. BenchTemp provides a set of benchmark datasets so that different TGNN models can be fairly compared. Further, BenchTemp engineers a standard pipeline that unifies the TGNN evaluation. With BenchTemp, we extensively compare the representative TGNN models on different tasks (e.g., link prediction and node classification) and settings (transductive and inductive), w.r.t. both effectiveness and efficiency metrics. We have made BenchTemp publicly available at https://github.com/qianghuangwhu/benchtemp.
CVFeb 3, 2023Code
Simple, Effective and General: A New Backbone for Cross-view Image Geo-localizationYingying Zhu, Hongji Yang, Yuxin Lu et al.
In this work, we aim at an important but less explored problem of a simple yet effective backbone specific for cross-view geo-localization task. Existing methods for cross-view geo-localization tasks are frequently characterized by 1) complicated methodologies, 2) GPU-consuming computations, and 3) a stringent assumption that aerial and ground images are centrally or orientation aligned. To address the above three challenges for cross-view image matching, we propose a new backbone network, named Simple Attention-based Image Geo-localization network (SAIG). The proposed SAIG effectively represents long-range interactions among patches as well as cross-view correspondence with multi-head self-attention layers. The "narrow-deep" architecture of our SAIG improves the feature richness without degradation in performance, while its shallow and effective convolutional stem preserves the locality, eliminating the loss of patchify boundary information. Our SAIG achieves state-of-the-art results on cross-view geo-localization, while being far simpler than previous works. Furthermore, with only 15.9% of the model parameters and half of the output dimension compared to the state-of-the-art, the SAIG adapts well across multiple cross-view datasets without employing any well-designed feature aggregation modules or feature alignment algorithms. In addition, our SAIG attains competitive scores on image retrieval benchmarks, further demonstrating its generalizability. As a backbone network, our SAIG is both easy to follow and computationally lightweight, which is meaningful in practical scenario. Moreover, we propose a simple Spatial-Mixed feature aggregation moDule (SMD) that can mix and project spatial information into a low-dimensional space to generate feature descriptors... (The code is available at https://github.com/yanghongji2007/SAIG)
IRNov 23, 2022Code
SAH: Shifting-aware Asymmetric Hashing for Reverse $k$-Maximum Inner Product SearchQiang Huang, Yanhao Wang, Anthony K. H. Tung
This paper investigates a new yet challenging problem called Reverse $k$-Maximum Inner Product Search (R$k$MIPS). Given a query (item) vector, a set of item vectors, and a set of user vectors, the problem of R$k$MIPS aims to find a set of user vectors whose inner products with the query vector are one of the $k$ largest among the query and item vectors. We propose the first subquadratic-time algorithm, i.e., Shifting-aware Asymmetric Hashing (SAH), to tackle the R$k$MIPS problem. To speed up the Maximum Inner Product Search (MIPS) on item vectors, we design a shifting-invariant asymmetric transformation and develop a novel sublinear-time Shifting-Aware Asymmetric Locality Sensitive Hashing (SA-ALSH) scheme. Furthermore, we devise a new blocking strategy based on the Cone-Tree to effectively prune user vectors (in a batch). We prove that SAH achieves a theoretical guarantee for solving the RMIPS problem. Experimental results on five real-world datasets show that SAH runs 4$\sim$8$\times$ faster than the state-of-the-art methods for R$k$MIPS while achieving F1-scores of over 90\%. The code is available at \url{https://github.com/HuangQiang/SAH}.
LGSep 9, 2024Code
Retrofitting Temporal Graph Neural Networks with TransformerQiang Huang, Xiao Yan, Xin Wang et al.
Temporal graph neural networks (TGNNs) outperform regular GNNs by incorporating time information into graph-based operations. However, TGNNs adopt specialized models (e.g., TGN, TGAT, and APAN ) and require tailored training frameworks (e.g., TGL and ETC). In this paper, we propose TF-TGN, which uses Transformer decoder as the backbone model for TGNN to enjoy Transformer's codebase for efficient training. In particular, Transformer achieves tremendous success for language modeling, and thus the community developed high-performance kernels (e.g., flash-attention and memory-efficient attention) and efficient distributed training schemes (e.g., PyTorch FSDP, DeepSpeed, and Megatron-LM). We observe that TGNN resembles language modeling, i.e., the message aggregation operation between chronologically occurring nodes and their temporal neighbors in TGNNs can be structured as sequence modeling. Beside this similarity, we also incorporate a series of algorithm designs including suffix infilling, temporal graph attention with self-loop, and causal masking self-attention to make TF-TGN work. During training, existing systems are slow in transforming the graph topology and conducting graph sampling. As such, we propose methods to parallelize the CSR format conversion and graph sampling. We also adapt Transformer codebase to train TF-TGN efficiently with multiple GPUs. We experiment with 9 graphs and compare with 2 state-of-the-art TGNN training frameworks. The results show that TF-TGN can accelerate training by over 2.20 while providing comparable or even superior accuracy to existing SOTA TGNNs. TF-TGN is available at https://github.com/qianghuangwhu/TF-TGN.
92.2CVApr 21Code
AnchorSeg: Language Grounded Query Banks for Reasoning SegmentationRui Qian, Chuanhang Deng, Qiang Huang et al.
Reasoning segmentation requires models to ground complex, implicit textual queries into precise pixel-level masks. Existing approaches rely on a single segmentation token $\texttt{<SEG>}$, whose hidden state implicitly encodes both semantic reasoning and spatial localization, limiting the model's ability to explicitly disentangle what to segment from where to segment. We introduce AnchorSeg, which reformulates reasoning segmentation as a structured conditional generation process over image tokens, conditioned on language grounded query banks. Instead of compressing all semantic reasoning and spatial localization into a single embedding, AnchorSeg constructs an ordered sequence of query banks: latent reasoning tokens that capture intermediate semantic states, and a segmentation anchor token that provides explicit spatial grounding. We model spatial conditioning as a factorized distribution over image tokens, where the anchor query determines localization signals while contextual queries provide semantic modulation. To bridge token-level predictions and pixel-level supervision, we propose Token--Mask Cycle Consistency (TMCC), a bidirectional training objective that enforces alignment across resolutions. By explicitly decoupling spatial grounding from semantic reasoning through structured language grounded query banks, AnchorSeg achieves state-of-the-art results on ReasonSeg test set (67.7\% gIoU and 68.1\% cIoU). All code and models are publicly available at https://github.com/rui-qian/AnchorSeg.
LGSep 7, 2023
TSGBench: Time Series Generation BenchmarkYihao Ang, Qiang Huang, Yifan Bao et al.
Synthetic Time Series Generation (TSG) is crucial in a range of applications, including data augmentation, anomaly detection, and privacy preservation. Although significant strides have been made in this field, existing methods exhibit three key limitations: (1) They often benchmark against similar model types, constraining a holistic view of performance capabilities. (2) The use of specialized synthetic and private datasets introduces biases and hampers generalizability. (3) Ambiguous evaluation measures, often tied to custom networks or downstream tasks, hinder consistent and fair comparison. To overcome these limitations, we introduce \textsf{TSGBench}, the inaugural Time Series Generation Benchmark, designed for a unified and comprehensive assessment of TSG methods. It comprises three modules: (1) a curated collection of publicly available, real-world datasets tailored for TSG, together with a standardized preprocessing pipeline; (2) a comprehensive evaluation measures suite including vanilla measures, new distance-based assessments, and visualization tools; (3) a pioneering generalization test rooted in Domain Adaptation (DA), compatible with all methods. We have conducted comprehensive experiments using \textsf{TSGBench} across a spectrum of ten real-world datasets from diverse domains, utilizing ten advanced TSG methods and twelve evaluation measures. The results highlight the reliability and efficacy of \textsf{TSGBench} in evaluating TSG methods. Crucially, \textsf{TSGBench} delivers a statistical analysis of the performance rankings of these methods, illuminating their varying performance across different datasets and measures and offering nuanced insights into the effectiveness of each method.
73.6CVApr 20
Measuring Social Bias in Vision-Language Models with Face-Only Counterfactuals from Real PhotosHaodong Chen, Qiang Huang, Jiaqi Zhao et al.
Vision-Language Models (VLMs) are increasingly deployed in socially consequential settings, raising concerns about social bias driven by demographic cues. A central challenge in measuring such social bias is attribution under visual confounding: real-world images entangle race and gender with correlated factors such as background and clothing, obscuring attribution. We propose a \textbf{face-only counterfactual evaluation paradigm} that isolates demographic effects while preserving real-image realism. Starting from real photographs, we generate counterfactual variants by editing only facial attributes related to race and gender, keeping all other visual factors fixed. Based on this paradigm, we construct \textbf{FOCUS}, a dataset of 480 scene-matched counterfactual images across six occupations and ten demographic groups, and propose \textbf{REFLECT}, a benchmark comprising three decision-oriented tasks: two-alternative forced choice, multiple-choice socioeconomic inference, and numeric salary recommendation. Experiments on five state-of-the-art VLMs reveal that demographic disparities persist under strict visual control and vary substantially across task formulations. These findings underscore the necessity of controlled, counterfactual audits and highlight task design as a critical factor in evaluating social bias in multimodal models.
LGAug 16, 2024
An Empirical Examination of Balancing Strategy for Counterfactual Estimation on Time SeriesQiang Huang, Chuizheng Meng, Defu Cao et al.
Counterfactual estimation from observations represents a critical endeavor in numerous application fields, such as healthcare and finance, with the primary challenge being the mitigation of treatment bias. The balancing strategy aimed at reducing covariate disparities between different treatment groups serves as a universal solution. However, when it comes to the time series data, the effectiveness of balancing strategies remains an open question, with a thorough analysis of the robustness and applicability of balancing strategies still lacking. This paper revisits counterfactual estimation in the temporal setting and provides a brief overview of recent advancements in balancing strategies. More importantly, we conduct a critical empirical examination for the effectiveness of the balancing strategies within the realm of temporal counterfactual estimation in various settings on multiple datasets. Our findings could be of significant interest to researchers and practitioners and call for a reexamination of the balancing strategy in time series settings.
LGJan 15, 2023
Improving Reliability of Fine-tuning with Block-wise OptimisationBasel Barakat, Qiang Huang
Finetuning can be used to tackle domain-specific tasks by transferring knowledge. Previous studies on finetuning focused on adapting only the weights of a task-specific classifier or re-optimizing all layers of the pre-trained model using the new task data. The first type of methods cannot mitigate the mismatch between a pre-trained model and the new task data, and the second type of methods easily cause over-fitting when processing tasks with limited data. To explore the effectiveness of fine-tuning, we propose a novel block-wise optimization mechanism, which adapts the weights of a group of layers of a pre-trained model. In our work, the layer selection can be done in four different ways. The first is layer-wise adaptation, which aims to search for the most salient single layer according to the classification performance. The second way is based on the first one, jointly adapting a small number of top-ranked layers instead of using an individual layer. The third is block based segmentation, where the layers of a deep network is segmented into blocks by non-weighting layers, such as the MaxPooling layer and Activation layer. The last one is to use a fixed-length sliding window to group layers block by block. To identify which group of layers is the most suitable for finetuning, the search starts from the target end and is conducted by freezing other layers excluding the selected layers and the classification layers. The most salient group of layers is determined in terms of classification performance. In our experiments, the proposed approaches are tested on an often-used dataset, Tf_flower, by finetuning five typical pre-trained models, VGG16, MobileNet-v1, MobileNet-v2, MobileNet-v3, and ResNet50v2, respectively. The obtained results show that the use of our proposed block-wise approaches can achieve better performances than the two baseline methods and the layer-wise method.
CVMar 6Code
Cut to the Chase: Training-free Multimodal Summarization via Chain-of-EventsXiaoxing You, Qiang Huang, Lingyu Li et al.
Multimodal Summarization (MMS) aims to generate concise textual summaries by understanding and integrating information across videos, transcripts, and images. However, existing approaches still suffer from three main challenges: (1) reliance on domain-specific supervision, (2) implicit fusion with weak cross-modal grounding, and (3) flat temporal modeling without event transitions. To address these issues, we introduce **CoE**, a training-free MMS framework that performs structured reasoning through a **Chain-of-Events** guided by a Hierarchical Event Graph (HEG). The HEG encodes textual semantics into an explicit event hierarchy that scaffolds cross-modal grounding and temporal reasoning. Guided by this structure, **CoE** localizes key visual cues, models event evolution and causal transitions, and refines outputs via lightweight style adaptation for domain alignment. Extensive experiments on eight diverse datasets demonstrate that **CoE** consistently outperforms state-of-the-art video CoT baselines, achieving average gains of **+3.04 ROUGE**, **+9.51 CIDEr**, and **+1.88 BERTScore**, highlighting its robustness, interpretability, and cross-domain generalization. Our code is available at https://github.com/youxiaoxing/CoE.
LGJul 24, 2023
De-confounding Representation Learning for Counterfactual Inference on Continuous Treatment via Generative Adversarial NetworkYonghe Zhao, Qiang Huang, Haolong Zeng et al.
Counterfactual inference for continuous rather than binary treatment variables is more common in real-world causal inference tasks. While there are already some sample reweighting methods based on Marginal Structural Model for eliminating the confounding bias, they generally focus on removing the treatment's linear dependence on confounders and rely on the accuracy of the assumed parametric models, which are usually unverifiable. In this paper, we propose a de-confounding representation learning (DRL) framework for counterfactual outcome estimation of continuous treatment by generating the representations of covariates disentangled with the treatment variables. The DRL is a non-parametric model that eliminates both linear and nonlinear dependence between treatment and covariates. Specifically, we train the correlations between the de-confounded representations and the treatment variables against the correlations between the covariate representations and the treatment variables to eliminate confounding bias. Further, a counterfactual inference network is embedded into the framework to make the learned representations serve both de-confounding and trusted inference. Extensive experiments on synthetic datasets show that the DRL model performs superiorly in learning de-confounding representations and outperforms state-of-the-art counterfactual inference models for continuous treatment variables. In addition, we apply the DRL model to a real-world medical dataset MIMIC and demonstrate a detailed causal relationship between red cell width distribution and mortality.
MEAug 22, 2023
Does Misclassifying Non-confounding Covariates as Confounders Affect the Causal Inference within the Potential Outcomes Framework?Yonghe Zhao, Qiang Huang, Shuai Fu et al.
The Potential Outcome Framework (POF) plays a prominent role in the field of causal inference. Most causal inference models based on the POF (CIMs-POF) are designed for eliminating confounding bias and default to an underlying assumption of Confounding Covariates. This assumption posits that the covariates consist solely of confounders. However, the assumption of Confounding Covariates is challenging to maintain in practice, particularly when dealing with high-dimensional covariates. While certain methods have been proposed to differentiate the distinct components of covariates prior to conducting causal inference, the consequences of treating non-confounding covariates as confounders remain unclear. This ambiguity poses a potential risk when conducting causal inference in practical scenarios. In this paper, we present a unified graphical framework for the CIMs-POF, which greatly enhances the comprehension of these models' underlying principles. Using this graphical framework, we quantitatively analyze the extent to which the inference performance of CIMs-POF is influenced when incorporating various types of non-confounding covariates, such as instrumental variables, mediators, colliders, and adjustment variables. The key findings are: in the task of eliminating confounding bias, the optimal scenario is for the covariates to exclusively encompass confounders; in the subsequent task of inferring counterfactual outcomes, the adjustment variables contribute to more accurate inferences. Furthermore, extensive experiments conducted on synthetic datasets consistently validate these theoretical conclusions.
AINov 30, 2025
One Swallow Does Not Make a Summer: Understanding Semantic Structures in Embedding SpacesYandong Sun, Qiang Huang, Ziwei Xu et al.
Embedding spaces are fundamental to modern AI, translating raw data into high-dimensional vectors that encode rich semantic relationships. Yet, their internal structures remain opaque, with existing approaches often sacrificing semantic coherence for structural regularity or incurring high computational overhead to improve interpretability. To address these challenges, we introduce the Semantic Field Subspace (SFS), a geometry-preserving, context-aware representation that captures local semantic neighborhoods within the embedding space. We also propose SAFARI (SemAntic Field subspAce deteRmInation), an unsupervised, modality-agnostic algorithm that uncovers hierarchical semantic structures using a novel metric called Semantic Shift, which quantifies how semantics evolve as SFSes evolve. To ensure scalability, we develop an efficient approximation of Semantic Shift that replaces costly SVD computations, achieving a 15~30x speedup with average errors below 0.01. Extensive evaluations across six real-world text and image datasets show that SFSes outperform standard classifiers not only in classification but also in nuanced tasks such as political bias detection, while SAFARI consistently reveals interpretable and generalizable semantic hierarchies. This work presents a unified framework for structuring, analyzing, and scaling semantic understanding in embedding spaces.
LGOct 6, 2023
From Zero to Hero: Detecting Leaked Data through Synthetic Data Injection and Model QueryingBiao Wu, Qiang Huang, Anthony K. H. Tung
Safeguarding the Intellectual Property (IP) of data has become critically important as machine learning applications continue to proliferate, and their success heavily relies on the quality of training data. While various mechanisms exist to secure data during storage, transmission, and consumption, fewer studies have been developed to detect whether they are already leaked for model training without authorization. This issue is particularly challenging due to the absence of information and control over the training process conducted by potential attackers. In this paper, we concentrate on the domain of tabular data and introduce a novel methodology, Local Distribution Shifting Synthesis (\textsc{LDSS}), to detect leaked data that are used to train classification models. The core concept behind \textsc{LDSS} involves injecting a small volume of synthetic data--characterized by local shifts in class distribution--into the owner's dataset. This enables the effective identification of models trained on leaked data through model querying alone, as the synthetic data injection results in a pronounced disparity in the predictions of models trained on leaked and modified datasets. \textsc{LDSS} is \emph{model-oblivious} and hence compatible with a diverse range of classification models. We have conducted extensive experiments on seven types of classification models across five real-world datasets. The comprehensive results affirm the reliability, robustness, fidelity, security, and efficiency of \textsc{LDSS}. Extending \textsc{LDSS} to regression tasks further highlights its versatility and efficacy compared with baseline methods.
LGAug 2, 2023
VLUCI: Variational Learning of Unobserved Confounders for Counterfactual InferenceYonghe Zhao, Qiang Huang, Siwei Wu et al.
Causal inference plays a vital role in diverse domains like epidemiology, healthcare, and economics. De-confounding and counterfactual prediction in observational data has emerged as a prominent concern in causal inference research. While existing models tackle observed confounders, the presence of unobserved confounders remains a significant challenge, distorting causal inference and impacting counterfactual outcome accuracy. To address this, we propose a novel variational learning model of unobserved confounders for counterfactual inference (VLUCI), which generates the posterior distribution of unobserved confounders. VLUCI relaxes the unconfoundedness assumption often overlooked by most causal inference methods. By disentangling observed and unobserved confounders, VLUCI constructs a doubly variational inference model to approximate the distribution of unobserved confounders, which are used for inferring more accurate counterfactual outcomes. Extensive experiments on synthetic and semi-synthetic datasets demonstrate VLUCI's superior performance in inferring unobserved confounders. It is compatible with state-of-the-art counterfactual inference models, significantly improving inference accuracy at both group and individual levels. Additionally, VLUCI provides confidence intervals for counterfactual outcomes, aiding decision-making in risk-sensitive domains. We further clarify the considerations when applying VLUCI to cases where unobserved confounders don't strictly conform to our model assumptions using the public IHDP dataset as an example, highlighting the practical advantages of VLUCI.
STAug 3, 2025Code
CTBench: Cryptocurrency Time Series Generation BenchmarkYihao Ang, Qiang Wang, Qiang Huang et al.
Synthetic time series are essential tools for data augmentation, stress testing, and algorithmic prototyping in quantitative finance. However, in cryptocurrency markets, characterized by 24/7 trading, extreme volatility, and rapid regime shifts, existing Time Series Generation (TSG) methods and benchmarks often fall short, jeopardizing practical utility. Most prior work (1) targets non-financial or traditional financial domains, (2) focuses narrowly on classification and forecasting while neglecting crypto-specific complexities, and (3) lacks critical financial evaluations, particularly for trading applications. To address these gaps, we introduce \textsf{CTBench}, the first comprehensive TSG benchmark tailored for the cryptocurrency domain. \textsf{CTBench} curates an open-source dataset from 452 tokens and evaluates TSG models across 13 metrics spanning 5 key dimensions: forecasting accuracy, rank fidelity, trading performance, risk assessment, and computational efficiency. A key innovation is a dual-task evaluation framework: (1) the \emph{Predictive Utility} task measures how well synthetic data preserves temporal and cross-sectional patterns for forecasting, while (2) the \emph{Statistical Arbitrage} task assesses whether reconstructed series support mean-reverting signals for trading. We benchmark eight representative models from five methodological families over four distinct market regimes, uncovering trade-offs between statistical fidelity and real-world profitability. Notably, \textsf{CTBench} offers model ranking analysis and actionable guidance for selecting and deploying TSG models in crypto analytics and strategy development.
CLMay 19, 2025Code
A Token is Worth over 1,000 Tokens: Efficient Knowledge Distillation through Low-Rank CloneJitai Hao, Qiang Huang, Hao Liu et al.
Training high-performing Small Language Models (SLMs) remains costly, even with knowledge distillation and pruning from larger teacher models. Existing work often faces three key challenges: (1) information loss from hard pruning, (2) inefficient alignment of representations, and (3) underutilization of informative activations, particularly from Feed-Forward Networks (FFNs). To address these challenges, we introduce Low-Rank Clone (LRC), an efficient pre-training method that constructs SLMs aspiring to behavioral equivalence with strong teacher models. LRC trains a set of low-rank projection matrices that jointly enable soft pruning by compressing teacher weights, and activation clone by aligning student activations, including FFN signals, with those of the teacher. This unified design maximizes knowledge transfer while removing the need for explicit alignment modules. Extensive experiments with open-source teachers (e.g., Llama-3.2-3B-Instruct, Qwen2.5-3B/7B-Instruct) show that LRC matches or surpasses state-of-the-art models trained on trillions of tokens--while using only 20B tokens, achieving over 1,000x training efficiency. Our codes and model checkpoints are available at https://github.com/CURRENTF/LowRankClone and https://huggingface.co/collections/JitaiHao/low-rank-clone-lrc-6828389e96a93f1d4219dfaf.
CVMar 3
GloPath: An Entity-Centric Foundation Model for Glomerular Lesion Assessment and Clinicopathological InsightsQiming He, Jing Li, Tian Guan et al.
Glomerular pathology is central to the diagnosis and prognosis of renal diseases, yet the heterogeneity of glomerular morphology and fine-grained lesion patterns remain challenging for current AI approaches. We present GloPath, an entity-centric foundation model trained on over one million glomeruli extracted from 14,049 renal biopsy specimens using multi-scale and multi-view self-supervised learning. GloPath addresses two major challenges in nephropathology: glomerular lesion assessment and clinicopathological insights discovery. For lesion assessment, GloPath was benchmarked across three independent cohorts on 52 tasks, including lesion recognition, grading, few-shot classification, and cross-modality diagnosis-outperforming state-of-the-art methods in 42 tasks (80.8%). In the large-scale real-world study, it achieved an ROC-AUC of 91.51% for lesion recognition, demonstrating strong robustness in routine clinical settings. For clinicopathological insights, GloPath systematically revealed statistically significant associations between glomerular morphological parameters and clinical indicators across 224 morphology-clinical variable pairs, demonstrating its capacity to connect tissue-level pathology with patient-level outcomes. Together, these results position GloPath as a scalable and interpretable platform for glomerular lesion assessment and clinicopathological discovery, representing a step toward clinically translatable AI in renal pathology.
CVSep 29, 2025Code
Uni-X: Mitigating Modality Conflict with a Two-End-Separated Architecture for Unified Multimodal ModelsJitai Hao, Hao Liu, Xinyan Xiao et al.
Unified Multimodal Models (UMMs) built on shared autoregressive (AR) transformers are attractive for their architectural simplicity. However, we identify a critical limitation: when trained on multimodal inputs, modality-shared transformers suffer from severe gradient conflicts between vision and text, particularly in shallow and deep layers. We trace this issue to the fundamentally different low-level statistical properties of images and text, while noting that conflicts diminish in middle layers where representations become more abstract and semantically aligned. To overcome this challenge, we propose Uni-X, a two-end-separated, middle-shared architecture. Uni-X dedicates its initial and final layers to modality-specific processing, while maintaining shared parameters in the middle layers for high-level semantic fusion. This X-shaped design not only eliminates gradient conflicts at both ends but also further alleviates residual conflicts in the shared layers. Extensive experiments validate the effectiveness of Uni-X. Under identical training conditions, Uni-X achieves superior training efficiency compared to strong baselines. When scaled to 3B parameters with larger training data, Uni-X matches or surpasses 7B AR-based UMMs, achieving a GenEval score of 82 for image generation alongside strong performance in text and vision understanding tasks. These results establish Uni-X as a parameter-efficient and scalable foundation for future unified multimodal modeling. Our code is available at https://github.com/CURRENTF/Uni-X
IVJul 24, 2025Code
DiagR1: A Vision-Language Model Trained via Reinforcement Learning for Digestive Pathology DiagnosisMinxi Ouyang, Lianghui Zhu, Yaqing Bao et al.
Multimodal large models have shown great potential in automating pathology image analysis. However, current multimodal models for gastrointestinal pathology are constrained by both data quality and reasoning transparency: pervasive noise and incomplete annotations in public datasets predispose vision language models to factual hallucinations when generating diagnostic text, while the absence of explicit intermediate reasoning chains renders the outputs difficult to audit and thus less trustworthy in clinical practice. To address these issues, we construct a large scale gastrointestinal pathology dataset containing both microscopic descriptions and diagnostic conclusions, and propose a prompt argumentation strategy that incorporates lesion classification and anatomical site information. This design guides the model to better capture image specific features and maintain semantic consistency in generation. Furthermore, we employ a post training pipeline that combines supervised fine tuning with Group Relative Policy Optimization (GRPO) to improve reasoning quality and output structure. Experimental results on real world pathology report generation tasks demonstrate that our approach significantly outperforms state of the art open source and proprietary baselines in terms of generation quality, structural completeness, and clinical relevance. Our solution outperforms state of the art models with 18.7% higher clinical relevance, 32.4% improved structural completeness, and 41.2% fewer diagnostic errors, demonstrating superior accuracy and clinical utility compared to existing solutions.
CLMay 30, 2025Code
PRISM: A Framework for Producing Interpretable Political Bias Embeddings with Political-Aware Cross-EncoderYiqun Sun, Qiang Huang, Anthony K. H. Tung et al.
Semantic Text Embedding is a fundamental NLP task that encodes textual content into vector representations, where proximity in the embedding space reflects semantic similarity. While existing embedding models excel at capturing general meaning, they often overlook ideological nuances, limiting their effectiveness in tasks that require an understanding of political bias. To address this gap, we introduce PRISM, the first framework designed to Produce inteRpretable polItical biaS eMbeddings. PRISM operates in two key stages: (1) Controversial Topic Bias Indicator Mining, which systematically extracts fine-grained political topics and their corresponding bias indicators from weakly labeled news data, and (2) Cross-Encoder Political Bias Embedding, which assigns structured bias scores to news articles based on their alignment with these indicators. This approach ensures that embeddings are explicitly tied to bias-revealing dimensions, enhancing both interpretability and predictive power. Through extensive experiments on two large-scale datasets, we demonstrate that PRISM outperforms state-of-the-art text embedding models in political bias classification while offering highly interpretable representations that facilitate diversified retrieval and ideological analysis. The source code is available at https://github.com/dukesun99/ACL-PRISM.
CLMay 30, 2025Code
Don't Reinvent the Wheel: Efficient Instruction-Following Text Embedding based on Guided Space TransformationYingchaojie Feng, Yiqun Sun, Yandong Sun et al.
In this work, we investigate an important task named instruction-following text embedding, which generates dynamic text embeddings that adapt to user instructions, highlighting specific attributes of text. Despite recent advancements, existing approaches suffer from significant computational overhead, as they require re-encoding the entire corpus for each new instruction. To address this challenge, we propose GSTransform, a novel instruction-following text embedding framework based on Guided Space Transformation. Our key observation is that instruction-relevant information is inherently encoded in generic embeddings but remains underutilized. Instead of repeatedly encoding the corpus for each instruction, GSTransform is a lightweight transformation mechanism that adapts pre-computed embeddings in real time to align with user instructions, guided by a small amount of text data with instruction-focused label annotation. We conduct extensive experiments on three instruction-awareness downstream tasks across nine real-world datasets, demonstrating that GSTransform improves instruction-following text embedding quality over state-of-the-art methods while achieving dramatic speedups of 6~300x in real-time processing on large-scale datasets. The source code is available at https://github.com/YingchaojieFeng/GSTransform.
CVSep 21, 2021Code
Unsupervised Abstract Reasoning for Raven's Problem MatricesTao Zhuo, Qiang Huang, Mohan Kankanhalli
Raven's Progressive Matrices (RPM) is highly correlated with human intelligence, and it has been widely used to measure the abstract reasoning ability of humans. In this paper, to study the abstract reasoning capability of deep neural networks, we propose the first unsupervised learning method for solving RPM problems. Since the ground truth labels are not allowed, we design a pseudo target based on the prior constraints of the RPM formulation to approximate the ground truth label, which effectively converts the unsupervised learning strategy into a supervised one. However, the correct answer is wrongly labelled by the pseudo target, and thus the noisy contrast will lead to inaccurate model training. To alleviate this issue, we propose to improve the model performance with negative answers. Moreover, we develop a decentralization method to adapt the feature representation to different RPM problems. Extensive experiments on three datasets demonstrate that our method even outperforms some of the supervised approaches. Our code is available at https://github.com/visiontao/ncd.
86.4CLApr 12
LLMs Should Incorporate Explicit Mechanisms for Human EmpathyXiaoxing You, Qiang Huang, Jun Yu
This paper argues that Large Language Models (LLMs) should incorporate explicit mechanisms for human empathy. As LLMs become increasingly deployed in high-stakes human-centered settings, their success depends not only on correctness or fluency but on faithful preservation of human perspectives. Yet, current LLMs systematically fail at this requirement: even when well-aligned and policy-compliant, they often attenuate affect, misrepresent contextual salience, and rigidify relational stance in ways that distort meaning. We formalize empathy as an observable behavioral property: the capacity to model and respond to human perspectives while preserving intention, affect, and context. Under this framing, we identify four recurring mechanisms of empathic failure in contemporary LLMs--sentiment attenuation, empathic granularity mismatch, conflict avoidance, and linguistic distancing--arising as structural consequences of prevailing training and alignment practices. We further organize these failures along three dimensions: cognitive, cultural, and relational empathy, to explain their manifestation across tasks. Empirical analyses show that strong benchmark performance can mask systematic empathic distortions, motivating empathy-aware objectives, benchmarks, and training signals as first-class components of LLM development.
94.0IRApr 4
MG$^2$-RAG: Multi-Granularity Graph for Multimodal Retrieval-Augmented GenerationSijun Dai, Qiang Huang, Xiaoxing You et al.
Retrieval-Augmented Generation (RAG) mitigates hallucinations in Multimodal Large Language Models (MLLMs), yet existing systems struggle with complex cross-modal reasoning. Flat vector retrieval often ignores structural dependencies, while current graph-based methods rely on costly ``translation-to-text'' pipelines that discard fine-grained visual information. To address these limitations, we propose \textbf{MG$^2$-RAG}, a lightweight \textbf{M}ulti-\textbf{G}ranularity \textbf{G}raph \textbf{RAG} framework that jointly improves graph construction, modality fusion, and cross-modal retrieval. MG$^2$-RAG constructs a hierarchical multimodal knowledge graph by combining lightweight textual parsing with entity-driven visual grounding, enabling textual entities and visual regions to be fused into unified multimodal nodes that preserve atomic evidence. Building on this representation, we introduce a multi-granularity graph retrieval mechanism that aggregates dense similarities and propagates relevance across the graph to support structured multi-hop reasoning. Extensive experiments across four representative multimodal tasks (i.e., retrieval, knowledge-based VQA, reasoning, and classification) demonstrate that MG$^2$-RAG consistently achieves state-of-the-art performance while reducing graph construction overhead with an average 43.3$\times$ speedup and 23.9$\times$ cost reduction compared with advanced graph-based frameworks.
81.2LGMay 1
PAMod: Modeling Cyclical Shifts via Phase-Amplitude Modulation for Non-stationary Time Series ForecastingYingbo Zhou, Yutong Ye, Shuhao Li et al.
Real-world time series forecasting faces the fundamental challenge of non-stationary statistical properties, including shifts in mean and variance over time. While reversible instance normalization (RevIN) has shown promise by stationarizing inputs and denormalizing outputs, it relies on the strong assumption that historical and future distributions remain identical. We observe that in many practical applications, distribution shifts follow cyclical patterns that correlate with periodic positions (e.g., seasonal and holiday volatility). To this end, we propose PAMod, a lightweight yet powerful framework that models cyclical distribution shifts via Phase-Amplitude Modulation in the normalized feature space. PAMod learns periodic embeddings to modulate representations: phase modulation captures mean shifts, while amplitude modulation adapts to variance changes. Crucially, we prove mathematically that modulating in normalized space is equivalent to applying dynamic denormalization, offering an elegant unification of distribution adaptation and representation learning. Extensive experiments on twelve real-world benchmarks demonstrate that PAMod achieves state-of-the-art performance with fewer computational resources. Furthermore, our modulation mechanism, as a novel plug-and-play technique, can improve existing time-series forecasting methods with simple integration.
13.4LGApr 30
Predicting Covariate-Driven Spatial Deformation for Nonstationary Gaussian ProcessesMinghao Gu, Weizhi Lin, Qiang Huang
Nonstationary Gaussian processes (GPs) are essential for modeling complex, locally heterogeneous spatial data. A common modeling approach is the spatial deformation method that warps the domain to recover isotropy. However, this static method does not account for changes in spatial correlation induced by covariates, limiting its ability to predict nonstationary GPs under new covariate conditions. To enable predictive modeling of the deformation method, we propose to model the spatial deformation as a function of covariates. The spaces of diffeomorphic deformations and Euclidean covariate vectors are connected by characterizing deformations as generated by velocity fields living in a Lie algebra. To overcome the estimation instability caused by high-order interactions between multiple covariates in a general Lie algebra, we prove that those interactions can be truncated with a moderate physical assumption. Based on the theoretical results, a concise functional form of deformations driven by multiple covariates can be established, and an efficient estimation-inference algorithm is developed for out-of-sample nonstationary GP prediction with limited covariate-deformation sample pairs. The effectiveness and generalizability of the method are demonstrated on a simulation study and two case studies, in the fields of manufacturing and geostatistics, respectively.
CVNov 26, 2025
Knowledge Completes the Vision: A Multimodal Entity-aware Retrieval-Augmented Generation Framework for News Image CaptioningXiaoxing You, Qiang Huang, Lingyu Li et al.
News image captioning aims to produce journalistically informative descriptions by combining visual content with contextual cues from associated articles. Despite recent advances, existing methods struggle with three key challenges: (1) incomplete information coverage, (2) weak cross-modal alignment, and (3) suboptimal visual-entity grounding. To address these issues, we introduce MERGE, the first Multimodal Entity-aware Retrieval-augmented GEneration framework for news image captioning. MERGE constructs an entity-centric multimodal knowledge base (EMKB) that integrates textual, visual, and structured knowledge, enabling enriched background retrieval. It improves cross-modal alignment through a multistage hypothesis-caption strategy and enhances visual-entity matching via dynamic retrieval guided by image content. Extensive experiments on GoodNews and NYTimes800k show that MERGE significantly outperforms state-of-the-art baselines, with CIDEr gains of +6.84 and +1.16 in caption quality, and F1-score improvements of +4.14 and +2.64 in named entity recognition. Notably, MERGE also generalizes well to the unseen Visual News dataset, achieving +20.17 in CIDEr and +6.22 in F1-score, demonstrating strong robustness and domain adaptability.
LGMar 6, 2024
Towards Controllable Time Series GenerationYifan Bao, Yihao Ang, Qiang Huang et al.
Time Series Generation (TSG) has emerged as a pivotal technique in synthesizing data that accurately mirrors real-world time series, becoming indispensable in numerous applications. Despite significant advancements in TSG, its efficacy frequently hinges on having large training datasets. This dependency presents a substantial challenge in data-scarce scenarios, especially when dealing with rare or unique conditions. To confront these challenges, we explore a new problem of Controllable Time Series Generation (CTSG), aiming to produce synthetic time series that can adapt to various external conditions, thereby tackling the data scarcity issue. In this paper, we propose \textbf{C}ontrollable \textbf{T}ime \textbf{S}eries (\textsf{CTS}), an innovative VAE-agnostic framework tailored for CTSG. A key feature of \textsf{CTS} is that it decouples the mapping process from standard VAE training, enabling precise learning of a complex interplay between latent features and external conditions. Moreover, we develop a comprehensive evaluation scheme for CTSG. Extensive experiments across three real-world time series datasets showcase \textsf{CTS}'s exceptional capabilities in generating high-quality, controllable outputs. This underscores its adeptness in seamlessly integrating latent features with external conditions. Extending \textsf{CTS} to the image domain highlights its remarkable potential for explainability and further reinforces its versatility across different modalities.
CVMar 31, 2025
PathOrchestra: A Comprehensive Foundation Model for Computational Pathology with Over 100 Diverse Clinical-Grade TasksFang Yan, Jianfeng Wu, Jiawen Li et al.
The complexity and variability inherent in high-resolution pathological images present significant challenges in computational pathology. While pathology foundation models leveraging AI have catalyzed transformative advancements, their development demands large-scale datasets, considerable storage capacity, and substantial computational resources. Furthermore, ensuring their clinical applicability and generalizability requires rigorous validation across a broad spectrum of clinical tasks. Here, we present PathOrchestra, a versatile pathology foundation model trained via self-supervised learning on a dataset comprising 300K pathological slides from 20 tissue and organ types across multiple centers. The model was rigorously evaluated on 112 clinical tasks using a combination of 61 private and 51 public datasets. These tasks encompass digital slide preprocessing, pan-cancer classification, lesion identification, multi-cancer subtype classification, biomarker assessment, gene expression prediction, and the generation of structured reports. PathOrchestra demonstrated exceptional performance across 27,755 WSIs and 9,415,729 ROIs, achieving over 0.950 accuracy in 47 tasks, including pan-cancer classification across various organs, lymphoma subtype diagnosis, and bladder cancer screening. Notably, it is the first model to generate structured reports for high-incidence colorectal cancer and diagnostically complex lymphoma-areas that are infrequently addressed by foundational models but hold immense clinical potential. Overall, PathOrchestra exemplifies the feasibility and efficacy of a large-scale, self-supervised pathology foundation model, validated across a broad range of clinical-grade tasks. Its high accuracy and reduced reliance on extensive data annotation underline its potential for clinical integration, offering a pathway toward more efficient and high-quality medical services.
36.0LGApr 7
Weight-Informed Self-Explaining Clustering for Mixed-Type Tabular DataLehao Li, Qiang Huang, Yihao Ang et al.
Clustering mixed-type tabular data is fundamental for exploratory analysis, yet remains challenging due to misaligned numerical-categorical representations, uneven and context-dependent feature relevance, and disconnected and post-hoc explanation from the clustering process. We propose WISE, a Weight-Informed Self-Explaining framework that unifies representation, feature weighting, clustering, and interpretation in a fully unsupervised and transparent pipeline. WISE introduces Binary Encoding with Padding (BEP) to align heterogeneous features in a unified sparse space, a Leave-One-Feature-Out (LOFO) strategy to sense multiple high-quality and diverse feature-weighting views, and a two-stage weight-aware clustering procedure to aggregate alternative semantic partitions. To ensure intrinsic interpretability, we further develop Discriminative FreqItems (DFI), which yields feature-level explanations that are consistent from instances to clusters with an additive decomposition guarantee. Extensive experiments on six real-world datasets demonstrate that WISE consistently outperforms classical and neural baselines in clustering quality while remaining efficient, and produces faithful, human-interpretable explanations grounded in the same primitives that drive clustering.
LGMay 20, 2025
AAPO: Enhancing the Reasoning Capabilities of LLMs with Advantage MomentumJian Xiong, Jingbo Zhou, Jingyong Ye et al.
Reinforcement learning (RL) has emerged as an effective approach for enhancing the reasoning capabilities of large language models (LLMs), especially in scenarios where supervised fine-tuning (SFT) falls short due to limited chain-of-thought (CoT) data. Among RL-based post-training methods, group relative advantage estimation, as exemplified by Group Relative Policy Optimization (GRPO), has attracted considerable attention for eliminating the dependency on the value model, thereby simplifying training compared to traditional approaches like Proximal Policy Optimization (PPO). However, we observe that exsiting group relative advantage estimation method still suffers from training inefficiencies, particularly when the estimated advantage approaches zero. To address this limitation, we propose Advantage-Augmented Policy Optimization (AAPO), a novel RL algorithm that optimizes the cross-entropy (CE) loss using advantages enhanced through a momentum-based estimation scheme. This approach effectively mitigates the inefficiencies associated with group relative advantage estimation. Experimental results on multiple mathematical reasoning benchmarks demonstrate the superior performance of AAPO.
CLJun 10, 2025
Text Embeddings Should Capture Implicit Semantics, Not Just Surface MeaningYiqun Sun, Qiang Huang, Anthony K. H. Tung et al.
This position paper argues that the text embedding research community should move beyond surface meaning and embrace implicit semantics as a central modeling goal. Text embedding models have become foundational in modern NLP, powering a wide range of applications and drawing increasing research attention. Yet, much of this progress remains narrowly focused on surface-level semantics. In contrast, linguistic theory emphasizes that meaning is often implicit, shaped by pragmatics, speaker intent, and sociocultural context. Current embedding models are typically trained on data that lacks such depth and evaluated on benchmarks that reward the capture of surface meaning. As a result, they struggle with tasks requiring interpretive reasoning, speaker stance, or social meaning. Our pilot study highlights this gap, showing that even state-of-the-art models perform only marginally better than simplistic baselines on implicit semantics tasks. To address this, we call for a paradigm shift: embedding research should prioritize more diverse and linguistically grounded training data, design benchmarks that evaluate deeper semantic understanding, and explicitly frame implicit meaning as a core modeling objective, better aligning embeddings with real-world language complexity.
CVNov 27, 2025
Partially Shared Concept Bottleneck ModelsDelong Zhao, Qiang Huang, Di Yan et al.
Concept Bottleneck Models (CBMs) enhance interpretability by introducing a layer of human-understandable concepts between inputs and predictions. While recent methods automate concept generation using Large Language Models (LLMs) and Vision-Language Models (VLMs), they still face three fundamental challenges: poor visual grounding, concept redundancy, and the absence of principled metrics to balance predictive accuracy and concept compactness. We introduce PS-CBM, a Partially Shared CBM framework that addresses these limitations through three core components: (1) a multimodal concept generator that integrates LLM-derived semantics with exemplar-based visual cues; (2) a Partially Shared Concept Strategy that merges concepts based on activation patterns to balance specificity and compactness; and (3) Concept-Efficient Accuracy (CEA), a post-hoc metric that jointly captures both predictive accuracy and concept compactness. Extensive experiments on eleven diverse datasets show that PS-CBM consistently outperforms state-of-the-art CBMs, improving classification accuracy by 1.0%-7.4% and CEA by 2.0%-9.5%, while requiring significantly fewer concepts. These results underscore PS-CBM's effectiveness in achieving both high accuracy and strong interpretability.
LGOct 22, 2025
Feature Space Adaptation for Robust Model Fine-TuningPeng Wang, Minghao Gu, Qiang Huang
Catastrophic forgetting is a common issue in model fine-tuning, especially when the downstream domain contains limited labeled data or differs greatly from the pre-training distribution. Existing parameter-efficient fine-tuning methods operate in the weight space by modifying or augmenting the pre-trained model's parameters, which can yield models overly specialized to the available downstream data. To mitigate the risk of overwriting pre-trained knowledge and enhance robustness, we propose to fine-tune the pre-trained model in the feature space. Two new fine-tuning methods are proposed: LoRFA (Low-Rank Feature Adaptation) and VeFA (Vector-Based Feature Adaptation). Feature space adaptation is inspired by the idea of effect equivalence modeling (EEM) of downstream lurking variables causing distribution shifts, which posits that unobserved factors can be represented as the total equivalent amount on observed features. By compensating for the effects of downstream lurking variables via a lightweight feature-level transformation, the pre-trained representations can be preserved, which improves model generalization under distribution shift. We evaluate LoRFA and VeFA versus LoRA on image classification, NLU, and NLG, covering both standard fine-tuning metrics and robustness. Feature space adaptation achieves comparable fine-tuning results and consistently stronger robustness.
CVOct 11, 2025
From Generic to Specialized: A Subspecialty Diagnostic System Powered by Self-Supervised Learning for Cervical HistopathologyYizhi Wang, Li Chen, Qiang Huang et al.
Cervical cancer remains a major malignancy, necessitating extensive and complex histopathological assessments and comprehensive support tools. Although deep learning shows promise, these models still lack accuracy and generalizability. General foundation models offer a broader reach but remain limited in capturing subspecialty-specific features and task adaptability. We introduce the Cervical Subspecialty Pathology (CerS-Path) diagnostic system, developed through two synergistic pretraining stages: self-supervised learning on approximately 190 million tissue patches from 140,000 slides to build a cervical-specific feature extractor, and multimodal enhancement with 2.5 million image-text pairs, followed by integration with multiple downstream diagnostic functions. Supporting eight diagnostic functions, including rare cancer classification and multimodal Q&A, CerS-Path surpasses prior foundation models in scope and clinical applicability. Comprehensive evaluations demonstrate a significant advance in cervical pathology, with prospective testing on 3,173 cases across five centers maintaining 99.38% screening sensitivity and excellent generalizability, highlighting its potential for subspecialty diagnostic translation and cervical cancer screening.
LGOct 9, 2025
RFOD: Random Forest-based Outlier Detection for Tabular DataYihao Ang, Peicheng Yao, Yifan Bao et al.
Outlier detection in tabular data is crucial for safeguarding data integrity in high-stakes domains such as cybersecurity, financial fraud detection, and healthcare, where anomalies can cause serious operational and economic impacts. Despite advances in both data mining and deep learning, many existing methods struggle with mixed-type tabular data, often relying on encoding schemes that lose important semantic information. Moreover, they frequently lack interpretability, offering little insight into which specific values cause anomalies. To overcome these challenges, we introduce \textsf{\textbf{RFOD}}, a novel \textsf{\textbf{R}}andom \textsf{\textbf{F}}orest-based \textsf{\textbf{O}}utlier \textsf{\textbf{D}}etection framework tailored for tabular data. Rather than modeling a global joint distribution, \textsf{RFOD} reframes anomaly detection as a feature-wise conditional reconstruction problem, training dedicated random forests for each feature conditioned on the others. This design robustly handles heterogeneous data types while preserving the semantic integrity of categorical features. To further enable precise and interpretable detection, \textsf{RFOD} combines Adjusted Gower's Distance (AGD) for cell-level scoring, which adapts to skewed numerical data and accounts for categorical confidence, with Uncertainty-Weighted Averaging (UWA) to aggregate cell-level scores into robust row-level anomaly scores. Extensive experiments on 15 real-world datasets demonstrate that \textsf{RFOD} consistently outperforms state-of-the-art baselines in detection accuracy while offering superior robustness, scalability, and interpretability for mixed-type tabular data.
IVMay 28, 2025
Subspecialty-Specific Foundation Model for Intelligent Gastrointestinal PathologyLianghui Zhu, Xitong Ling, Minxi Ouyang et al.
Gastrointestinal (GI) diseases represent a clinically significant burden, necessitating precise diagnostic approaches to optimize patient outcomes. Conventional histopathological diagnosis suffers from limited reproducibility and diagnostic variability. To overcome these limitations, we develop Digepath, a specialized foundation model for GI pathology. Our framework introduces a dual-phase iterative optimization strategy combining pretraining with fine-screening, specifically designed to address the detection of sparsely distributed lesion areas in whole-slide images. Digepath is pretrained on over 353 million multi-scale images from 210,043 H&E-stained slides of GI diseases. It attains state-of-the-art performance on 33 out of 34 tasks related to GI pathology, including pathological diagnosis, protein expression status prediction, gene mutation prediction, and prognosis evaluation. We further translate the intelligent screening module for early GI cancer and achieve near-perfect 99.70% sensitivity across nine independent medical institutions. This work not only advances AI-driven precision pathology for GI diseases but also bridge critical gaps in histopathological practice.
IVDec 29, 2024
Unlocking adaptive digital pathology through dynamic feature learningJiawen Li, Tian Guan, Qingxin Xia et al.
Foundation models have revolutionized the paradigm of digital pathology, as they leverage general-purpose features to emulate real-world pathological practices, enabling the quantitative analysis of critical histological patterns and the dissection of cancer-specific signals. However, these static general features constrain the flexibility and pathological relevance in the ever-evolving needs of clinical applications, hindering the broad use of the current models. Here we introduce PathFiT, a dynamic feature learning method that can be effortlessly plugged into various pathology foundation models to unlock their adaptability. Meanwhile, PathFiT performs seamless implementation across diverse pathology applications regardless of downstream specificity. To validate PathFiT, we construct a digital pathology benchmark with over 20 terabytes of Internet and real-world data comprising 28 H\&E-stained tasks and 7 specialized imaging tasks including Masson's Trichrome staining and immunofluorescence images. By applying PathFiT to the representative pathology foundation models, we demonstrate state-of-the-art performance on 34 out of 35 tasks, with significant improvements on 23 tasks and outperforming by 10.20% on specialized imaging tasks. The superior performance and versatility of PathFiT open up new avenues in computational pathology.
SDApr 30, 2024
Who is Authentic SpeakerQiang Huang
Voice conversion (VC) using deep learning technologies can now generate high quality one-to-many voices and thus has been used in some practical application fields, such as entertainment and healthcare. However, voice conversion can pose potential social issues when manipulated voices are employed for deceptive purposes. Moreover, it is a big challenge to find who are real speakers from the converted voices as the acoustic characteristics of source speakers are changed greatly. In this paper we attempt to explore the feasibility of identifying authentic speakers from converted voices. This study is conducted with the assumption that certain information from the source speakers persists, even when their voices undergo conversion into different target voices. Therefore our experiments are geared towards recognising the source speakers given the converted voices, which are generated by using FragmentVC on the randomly paired utterances from source and target speakers. To improve the robustness against converted voices, our recognition model is constructed by using hierarchical vector of locally aggregated descriptors (VLAD) in deep neural networks. The authentic speaker recognition system is mainly tested in two aspects, including the impact of quality of converted voices and the variations of VLAD. The dataset used in this work is VCTK corpus, where source and target speakers are randomly paired. The results obtained on the converted utterances show promising performances in recognising authentic speakers from converted voices.
SDOct 29, 2020
T-vectors: Weakly Supervised Speaker Identification Using Hierarchical Transformer ModelYanpei Shi, Mingjie Chen, Qiang Huang et al.
Identifying multiple speakers without knowing where a speaker's voice is in a recording is a challenging task. This paper proposes a hierarchical network with transformer encoders and memory mechanism to address this problem. The proposed model contains a frame-level encoder and segment-level encoder, both of them make use of the transformer encoder block. The multi-head attention mechanism in the transformer structure could better capture different speaker properties when the input utterance contains multiple speakers. The memory mechanism used in the frame-level encoders can build a recurrent connection that better capture long-term speaker features. The experiments are conducted on artificial datasets based on the Switchboard Cellular part1 (SWBC) and Voxceleb1 datasets. In different data construction scenarios (Concat and Overlap), the proposed model shows better performance comparaing with four strong baselines, reaching 13.3% and 10.5% relative improvement compared with H-vectors and S-vectors. The use of memory mechanism could reach 10.6% and 7.7% relative improvement compared with not using memory mechanism.
ASOct 21, 2020
Improving Audio Anomalies Recognition Using Temporal Convolutional Attention NetworkQiang Huang, Thomas Hain
Anomalous audio in speech recordings is often caused by speaker voice distortion, external noise, or even electric interferences. These obstacles have become a serious problem in some fields, such as high-quality music mixing and speech processing. In this paper, a novel approach using a temporal convolutional attention network (TCAN) is proposed to tackle this problem. The use of temporal conventional network (TCN) can capture long range patterns using a hierarchy of temporal convolutional filters. To enhance the ability to tackle audio anomalies in different acoustic conditions, an attention mechanism is used in TCN, where a self-attention block is added after each temporal convolutional layer. This aims to highlight the target related features and mitigate the interferences from irrelevant information. To evaluate the performance of the proposed model, audio recordings are collected from the TIMIT dataset, and are then changed by adding five different types of audio distortions: gaussian noise, magnitude drift, random dropout, reduction of temporal resolution, and time warping. Distortions are mixed at different signal-to-noise ratios (SNRs) (5dB, 10dB, 15dB, 20dB, 25dB, 30dB). The experimental results show that the use of proposed model can yield better classification performances than some strong baseline methods, such as the LSTM and TCN based models, by approximate 3$\sim$ 10\% relative improvements.
ASMay 16, 2020
Exploration of Audio Quality Assessment and Anomaly Localisation Using Attention ModelsQiang Huang, Thomas Hain
Many applications of speech technology require more and more audio data. Automatic assessment of the quality of the collected recordings is important to ensure they meet the requirements of the related applications. However, effective and high performing assessment remains a challenging task without a clean reference. In this paper, a novel model for audio quality assessment is proposed by jointly using bidirectional long short-term memory and an attention mechanism. The former is to mimic a human auditory perception ability to learn information from a recording, and the latter is to further discriminate interferences from desired signals by highlighting target related features. To evaluate our proposed approach, the TIMIT dataset is used and augmented by mixing with various natural sounds. In our experiments, two tasks are explored. The first task is to predict an utterance quality score, and the second is to identify where an anomalous distortion takes place in a recording. The obtained results show that the use of our proposed approach outperforms a strong baseline method and gains about 5% improvements after being measured by three metrics, Linear Correlation Coefficient and Spearman Rank Correlation Coefficient, and F1.
ASMay 15, 2020
Speaker Re-identification with Speaker Dependent Speech EnhancementYanpei Shi, Qiang Huang, Thomas Hain
While the use of deep neural networks has significantly boosted speaker recognition performance, it is still challenging to separate speakers in poor acoustic environments. Here speech enhancement methods have traditionally allowed improved performance. The recent works have shown that adapting speech enhancement can lead to further gains. This paper introduces a novel approach that cascades speech enhancement and speaker recognition. In the first step, a speaker embedding vector is generated , which is used in the second step to enhance the speech quality and re-identify the speakers. Models are trained in an integrated framework with joint optimisation. The proposed approach is evaluated using the Voxceleb1 dataset, which aims to assess speaker recognition in real world situations. In addition three types of noise at different signal-noise-ratios were added for this work. The obtained results show that the proposed approach using speaker dependent speech enhancement can yield better speaker recognition and speech enhancement performances than two baselines in various noise conditions.
ASMay 15, 2020
Weakly Supervised Training of Hierarchical Attention Networks for Speaker IdentificationYanpei Shi, Qiang Huang, Thomas Hain
Identifying multiple speakers without knowing where a speaker's voice is in a recording is a challenging task. In this paper, a hierarchical attention network is proposed to solve a weakly labelled speaker identification problem. The use of a hierarchical structure, consisting of a frame-level encoder and a segment-level encoder, aims to learn speaker related information locally and globally. Speech streams are segmented into fragments. The frame-level encoder with attention learns features and highlights the target related frames locally, and output a fragment based embedding. The segment-level encoder works with a second attention layer to emphasize the fragments probably related to target speakers. The global information is finally collected from segment-level module to predict speakers via a classifier. To evaluate the effectiveness of the proposed approach, artificial datasets based on Switchboard Cellular part1 (SWBC) and Voxceleb1 are constructed in two conditions, where speakers' voices are overlapped and not overlapped. Comparing to two baselines the obtained results show that the proposed approach can achieve better performances. Moreover, further experiments are conducted to evaluate the impact of utterance segmentation. The results show that a reasonable segmentation can slightly improve identification performances.
LGJan 17, 2020
GraphLIME: Local Interpretable Model Explanations for Graph Neural NetworksQiang Huang, Makoto Yamada, Yuan Tian et al.
Graph structured data has wide applicability in various domains such as physics, chemistry, biology, computer vision, and social networks, to name a few. Recently, graph neural networks (GNN) were shown to be successful in effectively representing graph structured data because of their good performance and generalization ability. GNN is a deep learning based method that learns a node representation by combining specific nodes and the structural/topological information of a graph. However, like other deep models, explaining the effectiveness of GNN models is a challenging task because of the complex nonlinear transformations made over the iterations. In this paper, we propose GraphLIME, a local interpretable model explanation for graphs using the Hilbert-Schmidt Independence Criterion (HSIC) Lasso, which is a nonlinear feature selection method. GraphLIME is a generic GNN-model explanation framework that learns a nonlinear interpretable model locally in the subgraph of the node being explained. More specifically, to explain a node, we generate a nonlinear interpretable model from its $N$-hop neighborhood and then compute the K most representative features as the explanations of its prediction using HSIC Lasso. Through experiments on two real-world datasets, the explanations of GraphLIME are found to be of extraordinary degree and more descriptive in comparison to the existing explanation methods.
CLJan 14, 2020
Robust Speaker Recognition Using Speech Enhancement And Attention ModelYanpei Shi, Qiang Huang, Thomas Hain
In this paper, a novel architecture for speaker recognition is proposed by cascading speech enhancement and speaker processing. Its aim is to improve speaker recognition performance when speech signals are corrupted by noise. Instead of individually processing speech enhancement and speaker recognition, the two modules are integrated into one framework by a joint optimisation using deep neural networks. Furthermore, to increase robustness against noise, a multi-stage attention mechanism is employed to highlight the speaker related features learned from context information in time and frequency domain. To evaluate speaker identification and verification performance of the proposed approach, we test it on the dataset of VoxCeleb1, one of mostly used benchmark datasets. Moreover, the robustness of our proposed approach is also tested on VoxCeleb1 data when being corrupted by three types of interferences, general noise, music, and babble, at different signal-to-noise ratio (SNR) levels. The obtained results show that the proposed approach using speech enhancement and multi-stage attention models outperforms two strong baselines not using them in most acoustic conditions in our experiments.
CLNov 18, 2019
Multi-task Sentence Encoding Model for Semantic Retrieval in Question Answering SystemsQiang Huang, Jianhui Bu, Weijian Xie et al.
Question Answering (QA) systems are used to provide proper responses to users' questions automatically. Sentence matching is an essential task in the QA systems and is usually reformulated as a Paraphrase Identification (PI) problem. Given a question, the aim of the task is to find the most similar question from a QA knowledge base. In this paper, we propose a Multi-task Sentence Encoding Model (MSEM) for the PI problem, wherein a connected graph is employed to depict the relation between sentences, and a multi-task learning model is applied to address both the sentence matching and sentence intent classification problem. In addition, we implement a general semantic retrieval framework that combines our proposed model and the Approximate Nearest Neighbor (ANN) technology, which enables us to find the most similar question from all available candidates very quickly during online serving. The experiments show the superiority of our proposed method as compared with the existing sentence matching models.
CLOct 17, 2019
H-VECTORS: Utterance-level Speaker Embedding Using A Hierarchical Attention ModelYanpei Shi, Qiang Huang, Thomas Hain
In this paper, a hierarchical attention network to generate utterance-level embeddings (H-vectors) for speaker identification is proposed. Since different parts of an utterance may have different contributions to speaker identities, the use of hierarchical structure aims to learn speaker related information locally and globally. In the proposed approach, frame-level encoder and attention are applied on segments of an input utterance and generate individual segment vectors. Then, segment level attention is applied on the segment vectors to construct an utterance representation. To evaluate the effectiveness of the proposed approach, NIST SRE 2008 Part1 dataset is used for training, and two datasets, Switchboard Cellular part1 and CallHome American English Speech, are used to evaluate the quality of extracted utterance embeddings on speaker identification and verification tasks. In comparison with two baselines, X-vector, X-vector+Attention, the obtained results show that H-vectors can achieve a significantly better performance. Furthermore, the extracted utterance-level embeddings are more discriminative than the two baselines when mapped into a 2D space using t-SNE.