Sepehr Hosseini

Tony Xu, Sepehr Hosseini, Chris Anderson et al.

Current self-supervised learning methods for 3D medical imaging rely on simple pretext formulations and organ- or modality-specific datasets, limiting their generalizability and scalability. We present 3DINO, a cutting-edge SSL method adapted to 3D datasets, and use it to pretrain 3DINO-ViT: a general-purpose medical imaging model, on an exceptionally large, multimodal, and multi-organ dataset of ~100,000 3D medical imaging scans from over 10 organs. We validate 3DINO-ViT using extensive experiments on numerous medical imaging segmentation and classification tasks. Our results demonstrate that 3DINO-ViT generalizes across modalities and organs, including out-of-distribution tasks and datasets, outperforming state-of-the-art methods on the majority of evaluation metrics and labeled dataset sizes. Our 3DINO framework and 3DINO-ViT will be made available to enable research on 3D foundation models or further finetuning for a wide range of medical imaging applications.

Mahdi S. Hosseini, Jia Shu Zhang, Zhe Liu et al.

Neural Architecture Search (NAS) has shifted network design from using human intuition to leveraging search algorithms guided by evaluation metrics. We study channel size optimization in convolutional neural networks (CNN) and identify the role it plays in model accuracy and complexity. Current channel size selection methods are generally limited by discrete sample spaces while suffering from manual iteration and simple heuristics. To solve this, we introduce an efficient dynamic scaling algorithm -- CONet -- that automatically optimizes channel sizes across network layers for a given CNN. Two metrics -- "\textit{Rank}" and "\textit{Rank Average Slope}" -- are introduced to identify the information accumulated in training. The algorithm dynamically scales channel sizes up or down over a fixed searching phase. We conduct experiments on CIFAR10/100 and ImageNet datasets and show that CONet can find efficient and accurate architectures searched in ResNet, DARTS, and DARTS+ spaces that outperform their baseline models. This document supersedes previously published paper in ICCV2021-NeurArch workshop. An additional section is included on manual scaling of channel size in CNNs to numerically validate of the metrics used in searching optimum channel configurations in CNNs.