Matteo Fontana

Jorge F. Lazo, Benoit Rosa, Michele Catellani et al.

Objective: Accurate visual classification of bladder tissue during Trans-Urethral Resection of Bladder Tumor (TURBT) procedures is essential to improve early cancer diagnosis and treatment. During TURBT interventions, White Light Imaging (WLI) and Narrow Band Imaging (NBI) techniques are used for lesion detection. Each imaging technique provides diverse visual information that allows clinicians to identify and classify cancerous lesions. Computer vision methods that use both imaging techniques could improve endoscopic diagnosis. We address the challenge of tissue classification when annotations are available only in one domain, in our case WLI, and the endoscopic images correspond to an unpaired dataset, i.e. there is no exact equivalent for every image in both NBI and WLI domains. Method: We propose a semi-surprised Generative Adversarial Network (GAN)-based method composed of three main components: a teacher network trained on the labeled WLI data; a cycle-consistency GAN to perform unpaired image-to-image translation, and a multi-input student network. To ensure the quality of the synthetic images generated by the proposed GAN we perform a detailed quantitative, and qualitative analysis with the help of specialists. Conclusion: The overall average classification accuracy, precision, and recall obtained with the proposed method for tissue classification are 0.90, 0.88, and 0.89 respectively, while the same metrics obtained in the unlabeled domain (NBI) are 0.92, 0.64, and 0.94 respectively. The quality of the generated images is reliable enough to deceive specialists. Significance: This study shows the potential of using semi-supervised GAN-based bladder tissue classification when annotations are limited in multi-domain data. The dataset is available at https://zenodo.org/record/7741476#.ZBQUK7TMJ6k

Eshant English, Eliot Wong-Toi, Matteo Fontana et al.

Conformal prediction provides machine learning models with prediction sets that offer theoretical guarantees, but the underlying assumption of exchangeability limits its applicability to time series data. Furthermore, existing approaches struggle to handle multi-step ahead prediction tasks, where uncertainty estimates across multiple future time points are crucial. We propose JANET (Joint Adaptive predictioN-region Estimation for Time-series), a novel framework for constructing conformal prediction regions that are valid for both univariate and multivariate time series. JANET generalises the inductive conformal framework and efficiently produces joint prediction regions with controlled K-familywise error rates, enabling flexible adaptation to specific application needs. Our empirical evaluation demonstrates JANET's superior performance in multi-step prediction tasks across diverse time series datasets, highlighting its potential for reliable and interpretable uncertainty quantification in sequential data.

Victor Dheur, Matteo Fontana, Yorick Estievenart et al.

Conformal prediction provides a powerful framework for constructing distribution-free prediction regions with finite-sample coverage guarantees. While extensively studied in univariate settings, its extension to multi-output problems presents additional challenges, including complex output dependencies and high computational costs, and remains relatively underexplored. In this work, we present a unified comparative study of nine conformal methods with different multivariate base models for constructing multivariate prediction regions within the same framework. This study highlights their key properties while also exploring the connections between them. Additionally, we introduce two novel classes of conformity scores for multi-output regression that generalize their univariate counterparts. These scores ensure asymptotic conditional coverage while maintaining exact finite-sample marginal coverage. One class is compatible with any generative model, offering broad applicability, while the other is computationally efficient, leveraging the properties of invertible generative models. Finally, we conduct a comprehensive empirical evaluation across 13 tabular datasets, comparing all the multi-output conformal methods explored in this work. To ensure a fair and consistent comparison, all methods are implemented within a unified code base.

Matteo Fontana, Gianluca Zeni, Simone Vantini

In this work we provide a review of basic ideas and novel developments about Conformal Prediction -- an innovative distribution-free, non-parametric forecasting method, based on minimal assumptions -- that is able to yield in a very straightforward way predictions sets that are valid in a statistical sense also in in the finite sample case. The in-depth discussion provided in the paper covers the theoretical underpinnings of Conformal Prediction, and then proceeds to list the more advanced developments and adaptations of the original idea.

Ilia Nouretdinov, James Gammerman, Matteo Fontana et al.

In this work we present a clustering technique called \textit{multi-level conformal clustering (MLCC)}. The technique is hierarchical in nature because it can be performed at multiple significance levels which yields greater insight into the data than performing it at just one level. We describe the theoretical underpinnings of MLCC, compare and contrast it with the hierarchical clustering algorithm, and then apply it to real world datasets to assess its performance. There are several advantages to using MLCC over more classical clustering techniques: Once a significance level has been set, MLCC is able to automatically select the number of clusters. Furthermore, thanks to the conformal prediction framework the resulting clustering model has a clear statistical meaning without any assumptions about the distribution of the data. This statistical robustness also allows us to perform clustering and anomaly detection simultaneously. Moreover, due to the flexibility of the conformal prediction framework, our algorithm can be used on top of many other machine learning algorithms.