Jiawei Xu

Chengcheng Yan, Jiawei Xu, Qingsong Wang et al.

The stochastic gradient descent (SGD) algorithm has achieved remarkable success in training deep learning models. However, it has several limitations, including susceptibility to vanishing gradients, sensitivity to input data, and a lack of robust theoretical guarantees. In recent years, alternating minimization (AM) methods have emerged as a promising alternative for model training by employing gradient-free approaches to iteratively update model parameters. Despite their potential, these methods often exhibit slow convergence rates. To address this challenge, we propose a novel Triple-Inertial Accelerated Alternating Minimization (TIAM) framework for neural network training. The TIAM approach incorporates a triple-inertial acceleration strategy with a specialized approximation method, facilitating targeted acceleration of different terms in each sub-problem optimization. This integration improves the efficiency of convergence, achieving superior performance with fewer iterations. Additionally, we provide a convergence analysis of the TIAM algorithm, including its global convergence properties and convergence rate. Extensive experiments validate the effectiveness of the TIAM method, showing significant improvements in generalization capability and computational efficiency compared to existing approaches, particularly when applied to the rectified linear unit (ReLU) and its variants.

Jianda Yue, Tingting Li, Jian Ouyang et al.

Taste peptides have emerged as promising natural flavoring agents attributed to their unique organoleptic properties, high safety profile, and potential health benefits. However, the de novo identification of taste peptides derived from animal, plant, or microbial sources remains a time-consuming and resource-intensive process, significantly impeding their widespread application in the food industry. Here, we present TastePepAI, a comprehensive artificial intelligence framework for customized taste peptide design and safety assessment. As the key element of this framework, a loss-supervised adaptive variational autoencoder (LA-VAE) is implemented to efficiently optimizes the latent representation of sequences during training and facilitates the generation of target peptides with desired taste profiles. Notably, our model incorporates a novel taste-avoidance mechanism, allowing for selective flavor exclusion. Subsequently, our in-house developed toxicity prediction algorithm (SpepToxPred) is integrated in the framework to undergo rigorous safety evaluation of generated peptides. Using this integrated platform, we successfully identified 73 peptides exhibiting sweet, salty, and umami, significantly expanding the current repertoire of taste peptides. This work demonstrates the potential of TastePepAI in accelerating taste peptide discovery for food applications and provides a versatile framework adaptable to broader peptide engineering challenges.