Jiang Guo

Yujie Qian, Jiang Guo, Zhengkai Tu et al.

Molecular structure recognition is the task of translating a molecular image into its graph structure. Significant variation in drawing styles and conventions exhibited in chemical literature poses a significant challenge for automating this task. In this paper, we propose MolScribe, a novel image-to-graph generation model that explicitly predicts atoms and bonds, along with their geometric layouts, to construct the molecular structure. Our model flexibly incorporates symbolic chemistry constraints to recognize chirality and expand abbreviated structures. We further develop data augmentation strategies to enhance the model robustness against domain shifts. In experiments on both synthetic and realistic molecular images, MolScribe significantly outperforms previous models, achieving 76-93% accuracy on public benchmarks. Chemists can also easily verify MolScribe's prediction, informed by its confidence estimation and atom-level alignment with the input image. MolScribe is publicly available through Python and web interfaces: https://github.com/thomas0809/MolScribe.

Wuwei Lan, Zhiguo Wang, Anuj Chauhan et al.

A practical text-to-SQL system should generalize well on a wide variety of natural language questions, unseen database schemas, and novel SQL query structures. To comprehensively evaluate text-to-SQL systems, we introduce a UNIfied benchmark for Text-to-SQL Evaluation (UNITE). It is composed of publicly available text-to-SQL datasets, containing natural language questions from more than 12 domains, SQL queries from more than 3.9K patterns, and 29K databases. Compared to the widely used Spider benchmark, we introduce $\sim$120K additional examples and a threefold increase in SQL patterns, such as comparative and boolean questions. We conduct a systematic study of six state-of-the-art (SOTA) text-to-SQL parsers on our new benchmark and show that: 1) Codex performs surprisingly well on out-of-domain datasets; 2) specially designed decoding methods (e.g. constrained beam search) can improve performance for both in-domain and out-of-domain settings; 3) explicitly modeling the relationship between questions and schemas further improves the Seq2Seq models. More importantly, our benchmark presents key challenges towards compositional generalization and robustness issues -- which these SOTA models cannot address well. Our code and data processing script are available at https://github.com/awslabs/unified-text2sql-benchmark

Wenyue Hua, Jiang Guo, Mingwen Dong et al. · mit

Current approaches of knowledge editing struggle to effectively propagate updates to interconnected facts. In this work, we delve into the barriers that hinder the appropriate propagation of updated knowledge within these models for accurate reasoning. To support our analysis, we introduce a novel reasoning-based benchmark -- ReCoE (Reasoning-based Counterfactual Editing dataset) -- which covers six common reasoning schemes in real world. We conduct a thorough analysis of existing knowledge editing techniques, including input augmentation, finetuning, and locate-and-edit. We found that all model editing methods show notably low performance on this dataset, especially in certain reasoning schemes. Our analysis over the chain-of-thought generation of edited models further uncover key reasons behind the inadequacy of existing knowledge editing methods from a reasoning standpoint, involving aspects on fact-wise editing, fact recall ability, and coherence in generation. We will make our benchmark publicly available.