Yang Lin

Xinyu Ma, Xu Chu, Yasha Wang et al.

Graph data augmentation has shown superiority in enhancing generalizability and robustness of GNNs in graph-level classifications. However, existing methods primarily focus on the augmentation in the graph signal space and the graph structure space independently, neglecting the joint interaction between them. In this paper, we address this limitation by formulating the problem as an optimal transport problem that aims to find an optimal inter-graph node matching strategy considering the interactions between graph structures and signals. To solve this problem, we propose a novel graph mixup algorithm called FGWMixup, which seeks a midpoint of source graphs in the Fused Gromov-Wasserstein (FGW) metric space. To enhance the scalability of our method, we introduce a relaxed FGW solver that accelerates FGWMixup by improving the convergence rate from $\mathcal{O}(t^{-1})$ to $\mathcal{O}(t^{-2})$. Extensive experiments conducted on five datasets using both classic (MPNNs) and advanced (Graphormers) GNN backbones demonstrate that FGWMixup effectively improves the generalizability and robustness of GNNs. Codes are available at https://github.com/ArthurLeoM/FGWMixup.

Yang Lin, Paul Mos, Andrei Ardelean et al.

Fluorescence lifetime imaging (FLI) has been receiving increased attention in recent years as a powerful diagnostic technique in biological and medical research. However, existing FLI systems often suffer from a tradeoff between processing speed, accuracy, and robustness. In this paper, we propose a robust approach that enables fast FLI with no degradation of accuracy. The approach is based on a SPAD TCSPC system coupled to a recurrent neural network (RNN) that accurately estimates the fluorescence lifetime directly from raw timestamps without building histograms, thereby drastically reducing transfer data volumes and hardware resource utilization, thus enabling FLI acquisition at video rate. We train two variants of the RNN on a synthetic dataset and compare the results to those obtained using center-of-mass method (CMM) and least squares fitting (LS fitting). Results demonstrate that two RNN variants, gated recurrent unit (GRU) and long short-term memory (LSTM), are comparable to CMM and LS fitting in terms of accuracy, while outperforming them in background noise by a large margin. To explore the ultimate limits of the approach, we derived the Cramer-Rao lower bound of the measurement, showing that RNN yields lifetime estimations with near-optimal precision. Moreover, our FLI model, which is purely trained on synthetic datasets, works well with never-seen-before, real-world data. To demonstrate real-time operation, we have built a FLI microscope based on Piccolo, a 32x32 SPAD sensor developed in our lab. Four quantized GRU cores, capable of processing up to 4 million photons per second, are deployed on a Xilinx Kintex-7 FPGA. Powered by the GRU, the FLI setup can retrieve real-time fluorescence lifetime images at up to 10 frames per second. The proposed FLI system is promising and ideally suited for biomedical applications.

Ermu Qiu, Tianyi Chen, Jun Gao et al.

Hybrid queries, which combine vector nearest neighbor searches with scalar predicates, represent a fundamental challenge in managing vector databases. Existing methods often restrict the number of vector columns involved or the complexity of scalar predicates, thereby limiting their flexibility in handling diverse query patterns. Moreover, these approaches typically do not fully leverage the correlations between scalar and vector attributes, or the distributional patterns observed from query vector neighborhoods. To address these limitations, we introduce BoomHQ, a learning-based framework to boost multiple hybrid queries on vector DBMSs. First, BoomHQ models the correlation between vector and scalar attributes using an autoencoder-based architecture, which is also friendly to data updates. Second, BoomHQ captures prevailing query patterns, particularly using estimated selectivity of scalar predicates within the neighborhood of a query vector. Guided by these two key features, BoomHQ predicts the execution hints and rewrites the original query into an optimized version. Furthermore, we extend well-known benchmarks by introducing vector and scalar data with inherent correlations to better evaluate query execution. Experimental results demonstrate that for multiple hybrid queries at specified recall thresholds, our method achieves a 2x average and over 25x peak speedup compared to the state-of-the-art. Additionally, BoomHQ shows strong robustness against data updates and consistent optimization effectiveness across three representative vector database systems.

Minghao Tang, Yongquan He, Yongxiu Xu et al.

Fine-grained entity typing (FET) is an essential task in natural language processing that aims to assign semantic types to entities in text. However, FET poses a major challenge known as the noise labeling problem, whereby current methods rely on estimating noise distribution to identify noisy labels but are confused by diverse noise distribution deviation. To address this limitation, we introduce Co-Prediction Prompt Tuning for noise correction in FET, which leverages multiple prediction results to identify and correct noisy labels. Specifically, we integrate prediction results to recall labeled labels and utilize a differentiated margin to identify inaccurate labels. Moreover, we design an optimization objective concerning divergent co-predictions during fine-tuning, ensuring that the model captures sufficient information and maintains robustness in noise identification. Experimental results on three widely-used FET datasets demonstrate that our noise correction approach significantly enhances the quality of various types of training samples, including those annotated using distant supervision, ChatGPT, and crowdsourcing.

Xinyu Ma, Xu Chu, Zhibang Yang et al.

With the increasingly powerful performances and enormous scales of pretrained models, promoting parameter efficiency in fine-tuning has become a crucial need for effective and efficient adaptation to various downstream tasks. One representative line of fine-tuning methods is Orthogonal Fine-tuning (OFT), which rigorously preserves the angular distances within the parameter space to preserve the pretrained knowledge. Despite the empirical effectiveness, OFT still suffers low parameter efficiency at $\mathcal{O}(d^2)$ and limited capability of downstream adaptation. Inspired by Givens rotation, in this paper, we proposed quasi-Givens Orthogonal Fine-Tuning (qGOFT) to address the problems. We first use $\mathcal{O}(d)$ Givens rotations to accomplish arbitrary orthogonal transformation in $SO(d)$ with provable equivalence, reducing parameter complexity from $\mathcal{O}(d^2)$ to $\mathcal{O}(d)$. Then we introduce flexible norm and relative angular adjustments under soft orthogonality regularization to enhance the adaptation capability of downstream semantic deviations. Extensive experiments on various tasks and pretrained models validate the effectiveness of our methods.