Fayad Ali Banna

Ahmed Rebai, Louay Boukhris, Radhi Toujani et al.

We propose to explore the potential of physics-informed neural networks (PINNs) in solving a class of partial differential equations (PDEs) used to model the propagation of chronic inflammatory bowel diseases, such as Crohn's disease and ulcerative colitis. An unsupervised approach was privileged during the deep neural network training. Given the complexity of the underlying biological system, characterized by intricate feedback loops and limited availability of high-quality data, the aim of this study is to explore the potential of PINNs in solving PDEs. In addition to providing this exploratory assessment, we also aim to emphasize the principles of reproducibility and transparency in our approach, with a specific focus on ensuring the robustness and generalizability through the use of artificial intelligence. We will quantify the relevance of the PINN method with several linear and non-linear PDEs in relation to biology. However, it is important to note that the final solution is dependent on the initial conditions, chosen boundary conditions, and neural network architectures.

Fayad Ali Banna, Antoine Caradot, Eduardo Brandao et al.

Identifying from observation data the governing differential equations of a physical dynamics is a key challenge in machine learning. Although approaches based on SINDy have shown great promise in this area, they still fail to address a whole class of real world problems where the data is sparsely sampled in time. In this article, we introduce Unrolled-SINDy, a simple methodology that leverages an unrolling scheme to improve the stability of explicit methods for PDE discovery. By decorrelating the numerical time step size from the sampling rate of the available data, our approach enables the recovery of equation parameters that would not be the minimizers of the original SINDy optimization problem due to large local truncation errors. Our method can be exploited either through an iterative closed-form approach or by a gradient descent scheme. Experiments show the versatility of our method. On both traditional SINDy and state-of-the-art noise-robust iNeuralSINDy, with different numerical schemes (Euler, RK4), our proposed unrolling scheme allows to tackle problems not accessible to non-unrolled methods.