Weakly Supervised Multi-Label Classification of Full-Text Scientific PapersYu Zhang, Bowen Jin, Xiusi Chen et al. · amazon-science
Instead of relying on human-annotated training samples to build a classifier, weakly supervised scientific paper classification aims to classify papers only using category descriptions (e.g., category names, category-indicative keywords). Existing studies on weakly supervised paper classification are less concerned with two challenges: (1) Papers should be classified into not only coarse-grained research topics but also fine-grained themes, and potentially into multiple themes, given a large and fine-grained label space; and (2) full text should be utilized to complement the paper title and abstract for classification. Moreover, instead of viewing the entire paper as a long linear sequence, one should exploit the structural information such as citation links across papers and the hierarchy of sections and paragraphs in each paper. To tackle these challenges, in this study, we propose FUTEX, a framework that uses the cross-paper network structure and the in-paper hierarchy structure to classify full-text scientific papers under weak supervision. A network-aware contrastive fine-tuning module and a hierarchy-aware aggregation module are designed to leverage the two types of structural signals, respectively. Experiments on two benchmark datasets demonstrate that FUTEX significantly outperforms competitive baselines and is on par with fully supervised classifiers that use 1,000 to 60,000 ground-truth training samples.
1.7CLOct 11, 2023
Ontology Enrichment for Effective Fine-grained Entity TypingSiru Ouyang, Jiaxin Huang, Pranav Pillai et al. · amazon-science
Fine-grained entity typing (FET) is the task of identifying specific entity types at a fine-grained level for entity mentions based on their contextual information. Conventional methods for FET require extensive human annotation, which is time-consuming and costly. Recent studies have been developing weakly supervised or zero-shot approaches. We study the setting of zero-shot FET where only an ontology is provided. However, most existing ontology structures lack rich supporting information and even contain ambiguous relations, making them ineffective in guiding FET. Recently developed language models, though promising in various few-shot and zero-shot NLP tasks, may face challenges in zero-shot FET due to their lack of interaction with task-specific ontology. In this study, we propose OnEFET, where we (1) enrich each node in the ontology structure with two types of extra information: instance information for training sample augmentation and topic information to relate types to contexts, and (2) develop a coarse-to-fine typing algorithm that exploits the enriched information by training an entailment model with contrasting topics and instance-based augmented training samples. Our experiments show that OnEFET achieves high-quality fine-grained entity typing without human annotation, outperforming existing zero-shot methods by a large margin and rivaling supervised methods.
1.2SIMar 11, 2023
Space-Invariant Projection in Streaming Network EmbeddingYanwen Zhang, Huiwen Wang, Jichang Zhao
Newly arriving nodes in dynamics networks would gradually make the node embedding space drifted and the retraining of node embedding and downstream models indispensable. An exact threshold size of these new nodes, below which the node embedding space will be predicatively maintained, however, is rarely considered in either theory or experiment. From the view of matrix perturbation theory, a threshold of the maximum number of new nodes that keep the node embedding space approximately equivalent is analytically provided and empirically validated. It is therefore theoretically guaranteed that as the size of newly arriving nodes is below this threshold, embeddings of these new nodes can be quickly derived from embeddings of original nodes. A generation framework, Space-Invariant Projection (SIP), is accordingly proposed to enables arbitrary static MF-based embedding schemes to embed new nodes in dynamics networks fast. The time complexity of SIP is linear with the network size. By combining SIP with four state-of-the-art MF-based schemes, we show that SIP exhibits not only wide adaptability but also strong empirical performance in terms of efficiency and efficacy on the node classification task in three real datasets.
4.1ROAug 8, 2024
Enhanced Prediction of Multi-Agent Trajectories via Control Inference and State-Space DynamicsYu Zhang, Yongxiang Zou, Haoyu Zhang et al.
In the field of autonomous systems, accurately predicting the trajectories of nearby vehicles and pedestrians is crucial for ensuring both safety and operational efficiency. This paper introduces a novel methodology for trajectory forecasting based on state-space dynamic system modeling, which endows agents with models that have tangible physical implications. To enhance the precision of state estimations within the dynamic system, the paper also presents a novel modeling technique for control variables. This technique utilizes a newly introduced model, termed "Mixed Mamba," to derive initial control states, thereby improving the predictive accuracy of these variables. Moverover, the proposed approach ingeniously integrates graph neural networks with state-space models, effectively capturing the complexities of multi-agent interactions. This combination provides a robust and scalable framework for forecasting multi-agent trajectories across a range of scenarios. Comprehensive evaluations demonstrate that this model outperforms several established benchmarks across various metrics and datasets, highlighting its significant potential to advance trajectory forecasting in autonomous systems.
2.3SYSep 23, 2024
Towards Real-world Deployment of NILM Systems: Challenges and PracticesJunyu Xue, Yu Zhang, Xudong Wang et al.
Non-intrusive load monitoring (NILM), as a key load monitoring technology, can much reduce the deployment cost of traditional power sensors. Previous research has largely focused on developing cloud-exclusive NILM algorithms, which often result in high computation costs and significant service delays. To address these issues, we propose a three-tier framework to enhance the real-world applicability of NILM systems through edge-cloud collaboration. Considering the computational resources available at both the edge and cloud, we implement a lightweight NILM model at the edge and a deep learning based model at the cloud, respectively. In addition to the differential model implementations, we also design a NILM-specific deployment scheme that integrates Gunicorn and NGINX to bridge the gap between theoretical algorithms and practical applications. To verify the effectiveness of the proposed framework, we apply real-world NILM scenario settings and implement the entire process of data acquisition, model training, and system deployment. The results demonstrate that our framework can achieve high decomposition accuracy while significantly reducing the cloud workload and communication overhead under practical considerations.
KICGPT: Large Language Model with Knowledge in Context for Knowledge Graph CompletionYanbin Wei, Qiushi Huang, James T. Kwok et al.
Knowledge Graph Completion (KGC) is crucial for addressing knowledge graph incompleteness and supporting downstream applications. Many models have been proposed for KGC. They can be categorized into two main classes: triple-based and text-based approaches. Triple-based methods struggle with long-tail entities due to limited structural information and imbalanced entity distributions. Text-based methods alleviate this issue but require costly training for language models and specific finetuning for knowledge graphs, which limits their efficiency. To alleviate these limitations, in this paper, we propose KICGPT, a framework that integrates a large language model (LLM) and a triple-based KGC retriever. It alleviates the long-tail problem without incurring additional training overhead. KICGPT uses an in-context learning strategy called Knowledge Prompt, which encodes structural knowledge into demonstrations to guide the LLM. Empirical results on benchmark datasets demonstrate the effectiveness of KICGPT with smaller training overhead and no finetuning.
21.8CLMay 27, 2025
Evaluating and Steering Modality Preferences in Multimodal Large Language ModelYu Zhang, Jinlong Ma, Yongshuai Hou et al.
Multimodal large language models (MLLMs) have achieved remarkable performance on complex tasks with multimodal context. However, it is still understudied whether they exhibit modality preference when processing multimodal contexts. To study this question, we first build a \textbf{MC\textsuperscript{2}} benchmark under controlled evidence conflict scenarios to systematically evaluate modality preference, which is the tendency to favor one modality over another when making decisions based on multimodal conflicting evidence. Our extensive evaluation reveals that all 18 tested MLLMs generally demonstrate clear modality bias, and modality preference can be influenced by external interventions. An in-depth analysis reveals that the preference direction can be captured within the latent representations of MLLMs. Built on this, we propose a probing and steering method based on representation engineering to explicitly control modality preference without additional fine-tuning or carefully crafted prompts. Our method effectively amplifies modality preference toward a desired direction and applies to downstream tasks such as hallucination mitigation and multimodal machine translation, yielding promising improvements.
4.0IRApr 15, 2024
Scenario-Adaptive Fine-Grained Personalization Network: Tailoring User Behavior Representation to the Scenario ContextMoyu Zhang, Yongxiang Tang, Jinxin Hu et al.
Existing methods often adjust representations adaptively only after aggregating user behavior sequences. This coarse-grained approach to re-weighting the entire user sequence hampers the model's ability to accurately model the user interest migration across different scenarios. To enhance the model's capacity to capture user interests from historical behavior sequences in each scenario, we develop a ranking framework named the Scenario-Adaptive Fine-Grained Personalization Network (SFPNet), which designs a kind of fine-grained method for multi-scenario personalized recommendations. Specifically, SFPNet comprises a series of blocks named as Scenario-Tailoring Block, stacked sequentially. Each block initially deploys a parameter personalization unit to integrate scenario information at a coarse-grained level by redefining fundamental features. Subsequently, we consolidate scenario-adaptively adjusted feature representations to serve as context information. By employing residual connection, we incorporate this context into the representation of each historical behavior, allowing for context-aware fine-grained customization of the behavior representations at the scenario-level, which in turn supports scenario-aware user interest modeling.
12.4AIAug 11, 2025
\(X\)-evolve: Solution space evolution powered by large language modelsYi Zhai, Zhiqiang Wei, Ruohan Li et al.
While combining large language models (LLMs) with evolutionary algorithms (EAs) shows promise for solving complex optimization problems, current approaches typically evolve individual solutions, often incurring high LLM call costs. We introduce \(X\)-evolve, a paradigm-shifting method that instead evolves solution spaces \(X\) (sets of individual solutions) - subsets of the overall search space \(S\). In \(X\)-evolve, LLMs generate tunable programs wherein certain code snippets, designated as parameters, define a tunable solution space. A score-based search algorithm then efficiently explores this parametrically defined space, guided by feedback from objective function scores. This strategy enables broader and more efficient exploration, which can potentially accelerate convergence at a much lower search cost, requiring up to two orders of magnitude fewer LLM calls than prior leading methods. We demonstrate \(X\)-evolve's efficacy across three distinct hard optimization problems. For the cap set problem, we discover a larger partial admissible set, establishing a new tighter asymptotic lower bound for the cap set constant (\(C \ge 2.2203\)). In information theory, we uncover a larger independent set for the 15-vertex cycle graph (\(\mathcal{C}_{15}^{\boxtimes 5}\), size 19,946), thereby raising the known lower bound on its Shannon capacity. Furthermore, for the NP-hard online bin packing problem, we generate heuristics that consistently outperform standard strategies across established benchmarks. By evolving solution spaces, our method considerably improves search effectiveness, making it possible to tackle high-dimensional problems that were previously computationally prohibitive.
8.4CVMay 13, 2025
Open Your Eyes: Vision Enhances Message Passing Neural Networks in Link PredictionYanbin Wei, Xuehao Wang, Zhan Zhuang et al.
Message-passing graph neural networks (MPNNs) and structural features (SFs) are cornerstones for the link prediction task. However, as a common and intuitive mode of understanding, the potential of visual perception has been overlooked in the MPNN community. For the first time, we equip MPNNs with vision structural awareness by proposing an effective framework called Graph Vision Network (GVN), along with a more efficient variant (E-GVN). Extensive empirical results demonstrate that with the proposed frameworks, GVN consistently benefits from the vision enhancement across seven link prediction datasets, including challenging large-scale graphs. Such improvements are compatible with existing state-of-the-art (SOTA) methods and GVNs achieve new SOTA results, thereby underscoring a promising novel direction for link prediction.
HR-VILAGE-3K3M: A Human Respiratory Viral Immunization Longitudinal Gene Expression Dataset for Systems ImmunityXuejun Sun, Yiran Song, Xiaochen Zhou et al.
Respiratory viral infections pose a global health burden, yet the cellular immune responses driving protection or pathology remain unclear. Natural infection cohorts often lack pre-exposure baseline data and structured temporal sampling. In contrast, inoculation and vaccination trials generate insightful longitudinal transcriptomic data. However, the scattering of these datasets across platforms, along with inconsistent metadata and preprocessing procedure, hinders AI-driven discovery. To address these challenges, we developed the Human Respiratory Viral Immunization LongitudinAl Gene Expression (HR-VILAGE-3K3M) repository: an AI-ready, rigorously curated dataset that integrates 14,136 RNA-seq profiles from 3,178 subjects across 66 studies encompassing over 2.56 million cells. Spanning vaccination, inoculation, and mixed exposures, the dataset includes microarray, bulk RNA-seq, and single-cell RNA-seq from whole blood, PBMCs, and nasal swabs, sourced from GEO, ImmPort, and ArrayExpress. We harmonized subject-level metadata, standardized outcome measures, applied unified preprocessing pipelines with rigorous quality control, and aligned all data to official gene symbols. To demonstrate the utility of HR-VILAGE-3K3M, we performed predictive modeling of vaccine responders and evaluated batch-effect correction methods. Beyond these initial demonstrations, it supports diverse systems immunology applications and benchmarking of feature selection and transfer learning algorithms. Its scale and heterogeneity also make it ideal for pretraining foundation models of the human immune response and for advancing multimodal learning frameworks. As the largest longitudinal transcriptomic resource for human respiratory viral immunization, it provides an accessible platform for reproducible AI-driven research, accelerating systems immunology and vaccine development against emerging viral threats.