Yuhao Zhang

Kaiser Sun, Peng Qi, Yuhao Zhang et al. · stanford

Generative models have been widely applied to solve extractive tasks, where parts of the input is extracted to form the desired output, and achieved significant success. For example, in extractive question answering (QA), generative models have constantly yielded state-of-the-art results. In this work, we identify the issue of tokenization inconsistency that is commonly neglected in training these models. This issue damages the extractive nature of these tasks after the input and output are tokenized inconsistently by the tokenizer, and thus leads to performance drop as well as hallucination. We propose a simple yet effective fix to this issue and conduct a case study on extractive QA. We show that, with consistent tokenization, the model performs better in both in-domain and out-of-domain datasets, with a notable average of +1.7 F2 gain when a BART model is trained on SQuAD and evaluated on 8 QA datasets. Further, the model converges faster, and becomes less likely to generate out-of-context answers. With these findings, we would like to call for more attention on how tokenization should be done when solving extractive tasks and recommend applying consistent tokenization during training.

Chonghan Chen, Haohan Wang, Leyang Hu et al.

We introduce the initial release of our software Robustar, which aims to improve the robustness of vision classification machine learning models through a data-driven perspective. Building upon the recent understanding that the lack of machine learning model's robustness is the tendency of the model's learning of spurious features, we aim to solve this problem from its root at the data perspective by removing the spurious features from the data before training. In particular, we introduce a software that helps the users to better prepare the data for training image classification models by allowing the users to annotate the spurious features at the pixel level of images. To facilitate this process, our software also leverages recent advances to help identify potential images and pixels worthy of attention and to continue the training with newly annotated data. Our software is hosted at the GitHub Repository https://github.com/HaohanWang/Robustar.

Chen Xu, Xiaoqian Liu, Erfeng He et al.

In this study, we present synchronous bilingual Connectionist Temporal Classification (CTC), an innovative framework that leverages dual CTC to bridge the gaps of both modality and language in the speech translation (ST) task. Utilizing transcript and translation as concurrent objectives for CTC, our model bridges the gap between audio and text as well as between source and target languages. Building upon the recent advances in CTC application, we develop an enhanced variant, BiL-CTC+, that establishes new state-of-the-art performances on the MuST-C ST benchmarks under resource-constrained scenarios. Intriguingly, our method also yields significant improvements in speech recognition performance, revealing the effect of cross-lingual learning on transcription and demonstrating its broad applicability. The source code is available at https://github.com/xuchennlp/S2T.

Jifan Chen, Yuhao Zhang, Lan Liu et al.

There has been great progress in unifying various table-to-text tasks using a single encoder-decoder model trained via multi-task learning (Xie et al., 2022). However, existing methods typically encode task information with a simple dataset name as a prefix to the encoder. This not only limits the effectiveness of multi-task learning, but also hinders the model's ability to generalize to new domains or tasks that were not seen during training, which is crucial for real-world applications. In this paper, we propose compositional task configurations, a set of prompts prepended to the encoder to improve cross-task generalization of unified models. We design the task configurations to explicitly specify the task type, as well as its input and output types. We show that this not only allows the model to better learn shared knowledge across different tasks at training, but also allows us to control the model by composing new configurations that apply novel input-output combinations in a zero-shot manner. We demonstrate via experiments over ten table-to-text tasks that our method outperforms the UnifiedSKG baseline by noticeable margins in both in-domain and zero-shot settings, with average improvements of +0.5 and +12.6 from using a T5-large backbone, respectively.

Dong Li, Jiandong Jin, Yuhao Zhang et al.

Pattern recognition through the fusion of RGB frames and Event streams has emerged as a novel research area in recent years. Current methods typically employ backbone networks to individually extract the features of RGB frames and event streams, and subsequently fuse these features for pattern recognition. However, we posit that these methods may suffer from key issues like sematic gaps and small-scale backbone networks. In this study, we introduce a novel pattern recognition framework that consolidates the semantic labels, RGB frames, and event streams, leveraging pre-trained large-scale vision-language models. Specifically, given the input RGB frames, event streams, and all the predefined semantic labels, we employ a pre-trained large-scale vision model (CLIP vision encoder) to extract the RGB and event features. To handle the semantic labels, we initially convert them into language descriptions through prompt engineering, and then obtain the semantic features using the pre-trained large-scale language model (CLIP text encoder). Subsequently, we integrate the RGB/Event features and semantic features using multimodal Transformer networks. The resulting frame and event tokens are further amplified using self-attention layers. Concurrently, we propose to enhance the interactions between text tokens and RGB/Event tokens via cross-attention. Finally, we consolidate all three modalities using self-attention and feed-forward layers for recognition. Comprehensive experiments on the HARDVS and PokerEvent datasets fully substantiate the efficacy of our proposed SAFE model. The source code will be made available at https://github.com/Event-AHU/SAFE_LargeVLM.

Yuhao Zhang, Chen Xu, Bojie Hu et al.

We present a method for introducing a text encoder into pre-trained end-to-end speech translation systems. It enhances the ability of adapting one modality (i.e., source-language speech) to another (i.e., source-language text). Thus, the speech translation model can learn from both unlabeled and labeled data, especially when the source-language text data is abundant. Beyond this, we present a denoising method to build a robust text encoder that can deal with both normal and noisy text data. Our system sets new state-of-the-arts on the MuST-C En-De, En-Fr, and LibriSpeech En-Fr tasks.

Yuhao Zhang, Chen Xu, Bei Li et al.

Significant improvements in end-to-end speech translation (ST) have been achieved through the application of multi-task learning. However, the extent to which auxiliary tasks are highly consistent with the ST task, and how much this approach truly helps, have not been thoroughly studied. In this paper, we investigate the consistency between different tasks, considering different times and modules. We find that the textual encoder primarily facilitates cross-modal conversion, but the presence of noise in speech impedes the consistency between text and speech representations. Furthermore, we propose an improved multi-task learning (IMTL) approach for the ST task, which bridges the modal gap by mitigating the difference in length and representation. We conduct experiments on the MuST-C dataset. The results demonstrate that our method attains state-of-the-art results. Moreover, when additional data is used, we achieve the new SOTA result on MuST-C English to Spanish task with 20.8% of the training time required by the current SOTA method.

Haoyuan Li, Hao Jiang, Tianke Zhang et al.

Training AI models has always been challenging, especially when there is a need for custom models to provide personalized services. Algorithm engineers often face a lengthy process to iteratively develop models tailored to specific business requirements, making it even more difficult for non-experts. The quest for high-quality and efficient model development, along with the emergence of Large Language Model (LLM) Agents, has become a key focus in the industry. Leveraging the powerful analytical, planning, and decision-making capabilities of LLM, we propose a TrainerAgent system comprising a multi-agent framework including Task, Data, Model and Server agents. These agents analyze user-defined tasks, input data, and requirements (e.g., accuracy, speed), optimizing them comprehensively from both data and model perspectives to obtain satisfactory models, and finally deploy these models as online service. Experimental evaluations on classical discriminative and generative tasks in computer vision and natural language processing domains demonstrate that our system consistently produces models that meet the desired criteria. Furthermore, the system exhibits the ability to critically identify and reject unattainable tasks, such as fantastical scenarios or unethical requests, ensuring robustness and safety. This research presents a significant advancement in achieving desired models with increased efficiency and quality as compared to traditional model development, facilitated by the integration of LLM-powered analysis, decision-making, and execution capabilities, as well as the collaboration among four agents. We anticipate that our work will contribute to the advancement of research on TrainerAgent in both academic and industry communities, potentially establishing it as a new paradigm for model development in the field of AI.

Yuhao Zhang, Zhiheng Liu, Fan Bu et al.

Existing end-to-end speech large language models (LLMs) usually rely on large-scale annotated data for training, while data-efficient training has not been discussed in depth. We focus on two fundamental problems between speech and text: the representation space gap and sequence length inconsistency. We propose Soundwave, which utilizes an efficient training strategy and a novel architecture to address these issues. Results show that Soundwave outperforms the advanced Qwen2-Audio in speech translation and AIR-Bench speech tasks, using only one-fiftieth of the training data. Further analysis shows that Soundwave still retains its intelligence during conversation. The project is available at https://github.com/FreedomIntelligence/Soundwave.

Howard Yen, Ashwin Paranjape, Mengzhou Xia et al. · stanford

Long-horizon agentic search requires iteratively exploring the web over long trajectories and synthesizing information across many sources, and is the foundation for enabling powerful applications like deep research systems. In this work, we show that popular agentic search frameworks struggle to scale to long trajectories primarily due to context limitations-they accumulate long, noisy content, hit context window and tool budgets, or stop early. Then, we introduce SLIM (Simple Lightweight Information Management), a simple framework that separates retrieval into distinct search and browse tools, and periodically summarizes the trajectory, keeping context concise while enabling longer, more focused searches. On long-horizon tasks, SLIM achieves comparable performance at substantially lower cost and with far fewer tool calls than strong open-source baselines across multiple base models. Specifically, with o3 as the base model, SLIM achieves 56% on BrowseComp and 31% on HLE, outperforming all open-source frameworks by 8 and 4 absolute points, respectively, while incurring 4-6x fewer tool calls. Finally, we release an automated fine-grained trajectory analysis pipeline and error taxonomy for characterizing long-horizon agentic search frameworks; SLIM exhibits fewer hallucinations than prior systems. We hope our analysis framework and simple tool design inform future long-horizon agents.

Yufan Deng, Ruida Wang, Yuhao Zhang et al.

Video generation models have shown their superior ability to generate photo-realistic video. However, how to accurately control (or edit) the video remains a formidable challenge. The main issues are: 1) how to perform direct and accurate user control in editing; 2) how to execute editings like changing shape, expression, and layout without unsightly distortion and artifacts to the edited content; and 3) how to maintain spatio-temporal consistency of video after editing. To address the above issues, we propose DragVideo, a general drag-style video editing framework. Inspired by DragGAN, DragVideo addresses issues 1) and 2) by proposing the drag-style video latent optimization method which gives desired control by updating noisy video latent according to drag instructions through video-level drag objective function. We amend issue 3) by integrating the video diffusion model with sample-specific LoRA and Mutual Self-Attention in DragVideo to ensure the edited result is spatio-temporally consistent. We also present a series of testing examples for drag-style video editing and conduct extensive experiments across a wide array of challenging editing tasks, such as motion, skeleton editing, etc, underscoring DragVideo can edit video in an intuitive, faithful to the user's intention manner, with nearly unnoticeable distortion and artifacts, while maintaining spatio-temporal consistency. While traditional prompt-based video editing fails to do the former two and directly applying image drag editing fails in the last, DragVideo's versatility and generality are emphasized. Github link: https://github.com/RickySkywalker/DragVideo-Official.

Yuhao Zhang, Kaiqi Kou, Bei Li et al.

End-to-end Speech Translation (ST) aims to convert speech into target text within a unified model. The inherent differences between speech and text modalities often impede effective cross-modal and cross-lingual transfer. Existing methods typically employ hard alignment (H-Align) of individual speech and text segments, which can degrade textual representations. To address this, we introduce Soft Alignment (S-Align), using adversarial training to align the representation spaces of both modalities. S-Align creates a modality-invariant space while preserving individual modality quality. Experiments on three languages from the MuST-C dataset show S-Align outperforms H-Align across multiple tasks and offers translation capabilities on par with specialized translation models.

Yi Luo, Zhenghao Lin, Yuhao Zhang et al.

Large Language Models (LLMs) exhibit impressive capabilities but also present risks such as biased content generation and privacy issues. One of the current alignment techniques includes principle-driven integration, but it faces challenges arising from the imprecision of manually crafted rules and inadequate risk perception in models without safety training. To address these, we introduce Guide-Align, a two-stage approach. Initially, a safety-trained model identifies potential risks and formulates specific guidelines for various inputs, establishing a comprehensive library of guidelines and a model for input-guidelines retrieval. Subsequently, the retrieval model correlates new inputs with relevant guidelines, which guide LLMs in response generation to ensure safe and high-quality outputs, thereby aligning with human values. An additional optional stage involves fine-tuning a model with well-aligned datasets generated through the process implemented in the second stage. Our method customizes guidelines to accommodate diverse inputs, thereby enhancing the fine-grainedness and comprehensiveness of the guideline library. Furthermore, it incorporates safety expertise from a safety-trained LLM through a lightweight retrieval model. We evaluate our approach on three benchmarks, demonstrating significant improvements in LLM security and quality. Notably, our fine-tuned model, Labrador, even at 13 billion parameters, outperforms GPT-3.5-turbo and surpasses GPT-4 in alignment capabilities.

Yuhao Zhang, Xiangru Xu

Feedforward neural networks are widely used in autonomous systems, particularly for control and perception tasks within the system loop. However, their vulnerability to adversarial attacks necessitates formal verification before deployment in safety-critical applications. Existing set propagation-based reachability analysis methods for feedforward neural networks often struggle to achieve both scalability and accuracy. This work presents a novel set-based approach for computing the reachable sets of convolutional neural networks. The proposed method leverages a hybrid zonotope representation and an efficient neural network reduction technique, providing a flexible trade-off between computational complexity and approximation accuracy. Numerical examples are presented to demonstrate the effectiveness of the proposed approach.

Xingyu Fu, Sheng Zhang, Gukyeong Kwon et al.

The open-ended Visual Question Answering (VQA) task requires AI models to jointly reason over visual and natural language inputs using world knowledge. Recently, pre-trained Language Models (PLM) such as GPT-3 have been applied to the task and shown to be powerful world knowledge sources. However, these methods suffer from low knowledge coverage caused by PLM bias -- the tendency to generate certain tokens over other tokens regardless of prompt changes, and high dependency on the PLM quality -- only models using GPT-3 can achieve the best result. To address the aforementioned challenges, we propose RASO: a new VQA pipeline that deploys a generate-then-select strategy guided by world knowledge for the first time. Rather than following the de facto standard to train a multi-modal model that directly generates the VQA answer, RASO first adopts PLM to generate all the possible answers, and then trains a lightweight answer selection model for the correct answer. As proved in our analysis, RASO expands the knowledge coverage from in-domain training data by a large margin. We provide extensive experimentation and show the effectiveness of our pipeline by advancing the state-of-the-art by 4.1% on OK-VQA, without additional computation cost. Code and models are released at http://cogcomp.org/page/publication_view/1010

Chen Xu, Xiaoqian Liu, Xiaowen Liu et al.

Combining end-to-end speech translation (ST) and non-autoregressive (NAR) generation is promising in language and speech processing for their advantages of less error propagation and low latency. In this paper, we investigate the potential of connectionist temporal classification (CTC) for non-autoregressive speech translation (NAST). In particular, we develop a model consisting of two encoders that are guided by CTC to predict the source and target texts, respectively. Introducing CTC into NAST on both language sides has obvious challenges: 1) the conditional independent generation somewhat breaks the interdependency among tokens, and 2) the monotonic alignment assumption in standard CTC does not hold in translation tasks. In response, we develop a prediction-aware encoding approach and a cross-layer attention approach to address these issues. We also use curriculum learning to improve convergence of training. Experiments on the MuST-C ST benchmarks show that our NAST model achieves an average BLEU score of 29.5 with a speed-up of 5.67$\times$, which is comparable to the autoregressive counterpart and even outperforms the previous best result of 0.9 BLEU points.

Chen Xu, Yuhao Zhang, Chengbo Jiao et al.

While Transformer has become the de-facto standard for speech, modeling upon the fine-grained frame-level features remains an open challenge of capturing long-distance dependencies and distributing the attention weights. We propose \textit{Progressive Down-Sampling} (PDS) which gradually compresses the acoustic features into coarser-grained units containing more complete semantic information, like text-level representation. In addition, we develop a representation fusion method to alleviate information loss that occurs inevitably during high compression. In this way, we compress the acoustic features into 1/32 of the initial length while achieving better or comparable performances on the speech recognition task. And as a bonus, it yields inference speedups ranging from 1.20$\times$ to 1.47$\times$. By reducing the modeling burden, we also achieve competitive results when training on the more challenging speech translation task.

Saahil Jain, Ashwin Agrawal, Adriel Saporta et al.

Extracting structured clinical information from free-text radiology reports can enable the use of radiology report information for a variety of critical healthcare applications. In our work, we present RadGraph, a dataset of entities and relations in full-text chest X-ray radiology reports based on a novel information extraction schema we designed to structure radiology reports. We release a development dataset, which contains board-certified radiologist annotations for 500 radiology reports from the MIMIC-CXR dataset (14,579 entities and 10,889 relations), and a test dataset, which contains two independent sets of board-certified radiologist annotations for 100 radiology reports split equally across the MIMIC-CXR and CheXpert datasets. Using these datasets, we train and test a deep learning model, RadGraph Benchmark, that achieves a micro F1 of 0.82 and 0.73 on relation extraction on the MIMIC-CXR and CheXpert test sets respectively. Additionally, we release an inference dataset, which contains annotations automatically generated by RadGraph Benchmark across 220,763 MIMIC-CXR reports (around 6 million entities and 4 million relations) and 500 CheXpert reports (13,783 entities and 9,908 relations) with mappings to associated chest radiographs. Our freely available dataset can facilitate a wide range of research in medical natural language processing, as well as computer vision and multi-modal learning when linked to chest radiographs.

Chen Xu, Bojie Hu, Yanyang Li et al.

Encoder pre-training is promising in end-to-end Speech Translation (ST), given the fact that speech-to-translation data is scarce. But ST encoders are not simple instances of Automatic Speech Recognition (ASR) or Machine Translation (MT) encoders. For example, we find that ASR encoders lack the global context representation, which is necessary for translation, whereas MT encoders are not designed to deal with long but locally attentive acoustic sequences. In this work, we propose a Stacked Acoustic-and-Textual Encoding (SATE) method for speech translation. Our encoder begins with processing the acoustic sequence as usual, but later behaves more like an MT encoder for a global representation of the input sequence. In this way, it is straightforward to incorporate the pre-trained models into the system. Also, we develop an adaptor module to alleviate the representation inconsistency between the pre-trained ASR encoder and MT encoder, and develop a multi-teacher knowledge distillation method to preserve the pre-training knowledge. Experimental results on the LibriSpeech En-Fr and MuST-C En-De ST tasks show that our method achieves state-of-the-art BLEU scores of 18.3 and 25.2. To our knowledge, we are the first to develop an end-to-end ST system that achieves comparable or even better BLEU performance than the cascaded ST counterpart when large-scale ASR and MT data is available.

Yasuhide Miura, Yuhao Zhang, Emily Bao Tsai et al.

Neural image-to-text radiology report generation systems offer the potential to improve radiology reporting by reducing the repetitive process of report drafting and identifying possible medical errors. However, existing report generation systems, despite achieving high performances on natural language generation metrics such as CIDEr or BLEU, still suffer from incomplete and inconsistent generations. Here we introduce two new simple rewards to encourage the generation of factually complete and consistent radiology reports: one that encourages the system to generate radiology domain entities consistent with the reference, and one that uses natural language inference to encourage these entities to be described in inferentially consistent ways. We combine these with the novel use of an existing semantic equivalence metric (BERTScore). We further propose a report generation system that optimizes these rewards via reinforcement learning. On two open radiology report datasets, our system substantially improved the F1 score of a clinical information extraction performance by +22.1 (Delta +63.9%). We further show via a human evaluation and a qualitative analysis that our system leads to generations that are more factually complete and consistent compared to the baselines.

Yuhao Zhang, Hang Jiang, Yasuhide Miura et al.

Learning visual representations of medical images (e.g., X-rays) is core to medical image understanding but its progress has been held back by the scarcity of human annotations. Existing work commonly relies on fine-tuning weights transferred from ImageNet pretraining, which is suboptimal due to drastically different image characteristics, or rule-based label extraction from the textual report data paired with medical images, which is inaccurate and hard to generalize. Meanwhile, several recent studies show exciting results from unsupervised contrastive learning from natural images, but we find these methods help little on medical images because of their high inter-class similarity. We propose ConVIRT, an alternative unsupervised strategy to learn medical visual representations by exploiting naturally occurring paired descriptive text. Our new method of pretraining medical image encoders with the paired text data via a bidirectional contrastive objective between the two modalities is domain-agnostic, and requires no additional expert input. We test ConVIRT by transferring our pretrained weights to 4 medical image classification tasks and 2 zero-shot retrieval tasks, and show that it leads to image representations that considerably outperform strong baselines in most settings. Notably, in all 4 classification tasks, our method requires only 10\% as much labeled training data as an ImageNet initialized counterpart to achieve better or comparable performance, demonstrating superior data efficiency.

Devendra Singh Sachan, Yuhao Zhang, Peng Qi et al.

Much recent work suggests that incorporating syntax information from dependency trees can improve task-specific transformer models. However, the effect of incorporating dependency tree information into pre-trained transformer models (e.g., BERT) remains unclear, especially given recent studies highlighting how these models implicitly encode syntax. In this work, we systematically study the utility of incorporating dependency trees into pre-trained transformers on three representative information extraction tasks: semantic role labeling (SRL), named entity recognition, and relation extraction. We propose and investigate two distinct strategies for incorporating dependency structure: a late fusion approach, which applies a graph neural network on the output of a transformer, and a joint fusion approach, which infuses syntax structure into the transformer attention layers. These strategies are representative of prior work, but we introduce additional model design elements that are necessary for obtaining improved performance. Our empirical analysis demonstrates that these syntax-infused transformers obtain state-of-the-art results on SRL and relation extraction tasks. However, our analysis also reveals a critical shortcoming of these models: we find that their performance gains are highly contingent on the availability of human-annotated dependency parses, which raises important questions regarding the viability of syntax-augmented transformers in real-world applications.

Yuhao Zhang, Yuhui Zhang, Peng Qi et al.

We introduce biomedical and clinical English model packages for the Stanza Python NLP library. These packages offer accurate syntactic analysis and named entity recognition capabilities for biomedical and clinical text, by combining Stanza's fully neural architecture with a wide variety of open datasets as well as large-scale unsupervised biomedical and clinical text data. We show via extensive experiments that our packages achieve syntactic analysis and named entity recognition performance that is on par with or surpasses state-of-the-art results. We further show that these models do not compromise speed compared to existing toolkits when GPU acceleration is available, and are made easy to download and use with Stanza's Python interface. A demonstration of our packages is available at: http://stanza.run/bio.

Yinqiao Li, Chi Hu, Yuhao Zhang et al.

Neural architecture search (NAS) has advanced significantly in recent years but most NAS systems restrict search to learning architectures of a recurrent or convolutional cell. In this paper, we extend the search space of NAS. In particular, we present a general approach to learn both intra-cell and inter-cell architectures (call it ESS). For a better search result, we design a joint learning method to perform intra-cell and inter-cell NAS simultaneously. We implement our model in a differentiable architecture search system. For recurrent neural language modeling, it outperforms a strong baseline significantly on the PTB and WikiText data, with a new state-of-the-art on PTB. Moreover, the learned architectures show good transferability to other systems. E.g., they improve state-of-the-art systems on the CoNLL and WNUT named entity recognition (NER) tasks and CoNLL chunking task, indicating a promising line of research on large-scale pre-learned architectures.

Peng Qi, Yuhao Zhang, Christopher D. Manning

We investigate the problem of generating informative questions in information-asymmetric conversations. Unlike previous work on question generation which largely assumes knowledge of what the answer might be, we are interested in the scenario where the questioner is not given the context from which answers are drawn, but must reason pragmatically about how to acquire new information, given the shared conversation history. We identify two core challenges: (1) formally defining the informativeness of potential questions, and (2) exploring the prohibitively large space of potential questions to find the good candidates. To generate pragmatic questions, we use reinforcement learning to optimize an informativeness metric we propose, combined with a reward function designed to promote more specific questions. We demonstrate that the resulting pragmatic questioner substantially improves the informativeness and specificity of questions generated over a baseline model, as evaluated by our metrics as well as humans.

Yuhao Zhang, Aws Albarghouthi, Loris D'Antoni

Deep neural networks for natural language processing tasks are vulnerable to adversarial input perturbations. In this paper, we present a versatile language for programmatically specifying string transformations -- e.g., insertions, deletions, substitutions, swaps, etc. -- that are relevant to the task at hand. We then present an approach to adversarially training models that are robust to such user-defined string transformations. Our approach combines the advantages of search-based techniques for adversarial training with abstraction-based techniques. Specifically, we show how to decompose a set of user-defined string transformations into two component specifications, one that benefits from search and another from abstraction. We use our technique to train models on the AG and SST2 datasets and show that the resulting models are robust to combinations of user-defined transformations mimicking spelling mistakes and other meaning-preserving transformations.

Yuhao Zhang, Derek Merck, Emily Bao Tsai et al.

Neural abstractive summarization models are able to generate summaries which have high overlap with human references. However, existing models are not optimized for factual correctness, a critical metric in real-world applications. In this work, we develop a general framework where we evaluate the factual correctness of a generated summary by fact-checking it automatically against its reference using an information extraction module. We further propose a training strategy which optimizes a neural summarization model with a factual correctness reward via reinforcement learning. We apply the proposed method to the summarization of radiology reports, where factual correctness is a key requirement. On two separate datasets collected from hospitals, we show via both automatic and human evaluation that the proposed approach substantially improves the factual correctness and overall quality of outputs over a competitive neural summarization system, producing radiology summaries that approach the quality of human-authored ones.

Yuhao Zhang, Peng Qi, Christopher D. Manning

Dependency trees help relation extraction models capture long-range relations between words. However, existing dependency-based models either neglect crucial information (e.g., negation) by pruning the dependency trees too aggressively, or are computationally inefficient because it is difficult to parallelize over different tree structures. We propose an extension of graph convolutional networks that is tailored for relation extraction, which pools information over arbitrary dependency structures efficiently in parallel. To incorporate relevant information while maximally removing irrelevant content, we further apply a novel pruning strategy to the input trees by keeping words immediately around the shortest path between the two entities among which a relation might hold. The resulting model achieves state-of-the-art performance on the large-scale TACRED dataset, outperforming existing sequence and dependency-based neural models. We also show through detailed analysis that this model has complementary strengths to sequence models, and combining them further improves the state of the art.

Yuhao Zhang, Daisy Yi Ding, Tianpei Qian et al.

The Impression section of a radiology report summarizes crucial radiology findings in natural language and plays a central role in communicating these findings to physicians. However, the process of generating impressions by summarizing findings is time-consuming for radiologists and prone to errors. We propose to automate the generation of radiology impressions with neural sequence-to-sequence learning. We further propose a customized neural model for this task which learns to encode the study background information and use this information to guide the decoding process. On a large dataset of radiology reports collected from actual hospital studies, our model outperforms existing non-neural and neural baselines under the ROUGE metrics. In a blind experiment, a board-certified radiologist indicated that 67% of sampled system summaries are at least as good as the corresponding human-written summaries, suggesting significant clinical validity. To our knowledge our work represents the first attempt in this direction.

Xuan Wang, Yu Zhang, Xiang Ren et al.

Motivation: State-of-the-art biomedical named entity recognition (BioNER) systems often require handcrafted features specific to each entity type, such as genes, chemicals and diseases. Although recent studies explored using neural network models for BioNER to free experts from manual feature engineering, the performance remains limited by the available training data for each entity type. Results: We propose a multi-task learning framework for BioNER to collectively use the training data of different types of entities and improve the performance on each of them. In experiments on 15 benchmark BioNER datasets, our multi-task model achieves substantially better performance compared with state-of-the-art BioNER systems and baseline neural sequence labeling models. Further analysis shows that the large performance gains come from sharing character- and word-level information among relevant biomedical entities across differently labeled corpora.