Meng Chen

Mingsen Du, Meng Chen, Yongjian Li et al.

Multivariate time series (MTS) classification is widely applied in fields such as industry, healthcare, and finance, aiming to extract key features from complex time series data for accurate decision-making and prediction. However, existing methods for MTS often struggle due to the challenges of effectively modeling high-dimensional data and the lack of labeled data, resulting in poor classification performance. To address this issue, we propose a heterogeneous relationships of subjects and shapelets method for semi-supervised MTS classification. This method offers a novel perspective by integrating various types of additional information while capturing the relationships between them. Specifically, we first utilize a contrast temporal self-attention module to obtain sparse MTS representations, and then model the similarities between these representations using soft dynamic time warping to construct a similarity graph. Secondly, we learn the shapelets for different subject types, incorporating both the subject features and their shapelets as additional information to further refine the similarity graph, ultimately generating a heterogeneous graph. Finally, we use a dual level graph attention network to get prediction. Through this method, we successfully transform dataset into a heterogeneous graph, integrating multiple additional information and achieving precise semi-supervised node classification. Experiments on the Human Activity Recognition, sleep stage classification and University of East Anglia datasets demonstrate that our method outperforms current state-of-the-art methods in MTS classification tasks, validating its superiority.

Meng Chen, Chen Geng, Dongdong Wang et al.

BACKGROUND AND PURPOSE: Cerebral aneurysm is one of the most common cerebrovascular diseases, and SAH caused by its rupture has a very high mortality and disability rate. Existing automatic segmentation methods based on DLMs with TOF-MRA modality could not segment edge voxels very well, so that our goal is to realize more accurate segmentation of cerebral aneurysms in 3D TOF-MRA with the help of DLMs. MATERIALS AND METHODS: In this research, we proposed an automatic segmentation framework of cerebral aneurysm in 3D TOF-MRA. The framework was composed of two segmentation networks ranging from coarse to fine. The coarse segmentation network, namely DeepMedic, completed the coarse segmentation of cerebral aneurysms, and the processed results were fed into the fine segmentation network, namely dual-channel SE_3D U-Net trained with weighted loss function, for fine segmentation. Images from ADAM2020 (n=113) were used for training and validation and images from another center (n=45) were used for testing. The segmentation metrics we used include DSC, HD, and VS. RESULTS: The trained cerebral aneurysm segmentation model achieved DSC of 0.75, HD of 1.52, and VS of 0.91 on validation cohort. On the totally independent test cohort, our method achieved the highest DSC of 0.12, the lowest HD of 11.61, and the highest VS of 0.16 in comparison with state-of-the-art segmentation networks. CONCLUSIONS: The coarse-to-fine framework, which composed of DeepMedic and dual-channel SE_3D U-Net can segment cerebral aneurysms in 3D TOF-MRA with a superior accuracy.

Chen Geng, Meng Chen, Ruoyu Di et al.

Background:Subarachnoid hemorrhage caused by ruptured cerebral aneurysm often leads to fatal consequences.However,if the aneurysm can be found and treated during asymptomatic periods,the probability of rupture can be greatly reduced.At present,time-of-flight magnetic resonance angiography is one of the most commonly used non-invasive screening techniques for cerebral aneurysm,and the application of deep learning technology in aneurysm detection can effectively improve the screening effect of aneurysm.Existing studies have found that three-dimensional features play an important role in aneurysm detection,but they require a large amount of training data and have problems such as a high false positive rate. Methods:This paper proposed a novel method for aneurysm detection.First,a fully automatic cerebral artery segmentation algorithm without training data was used to extract the volume of interest,and then the 3D U-Net was improved by the 3D SENet module to establish an aneurysm detection model.Eventually a set of fully automated,end-to-end aneurysm detection methods have been formed. Results:A total of 231 magnetic resonance angiography image data were used in this study,among which 132 were training sets,34 were internal test sets and 65 were external test sets.The presented method obtained 97.89% sensitivity in the five-fold cross-validation and obtained 91.0% sensitivity with 2.48 false positives/case in the detection of the external test sets. Conclusions:Compared with the results of our previous studies and other studies,the method in this paper achieves a very competitive sensitivity with less training data and maintains a low false positive rate.As the only method currently using 3D U-Net for aneurysm detection,it proves the feasibility and superior performance of this network in aneurysm detection,and also explores the potential of the channel attention mechanism in this task.