Liang Cheng

Tianyang Liu, Tianyi Li, Liang Cheng et al.

Large Language Models (LLMs) are reported to hold undesirable attestation bias on inference tasks: when asked to predict if a premise P entails a hypothesis H, instead of considering H's conditional truthfulness entailed by P, LLMs tend to use the out-of-context truth label of H as a fragile proxy. In this paper, we propose a pipeline that exploits this bias to do explicit inductive inference. Our pipeline uses an LLM to transform a premise into a set of attested alternatives, and then aggregate answers of the derived new entailment inquiries to support the original inference prediction. On a directional predicate entailment benchmark, we demonstrate that by applying this simple pipeline, we can improve the overall performance of LLMs on inference and substantially alleviate the impact of their attestation bias.

Liang Cheng, Jonas Frankemölle, Adam Axelsson et al.

The pressing need for digitization of historical documents has led to a strong interest in designing computerised image processing methods for automatic handwritten text recognition. However, not much attention has been paid on studying the handwritten text written in the margins, i.e. marginalia, that also forms an important source of information. Nevertheless, training an accurate and robust recognition system for marginalia calls for data-efficient approaches due to the unavailability of sufficient amounts of annotated multi-writer texts. Therefore, this work presents an end-to-end framework for automatic detection and recognition of handwritten marginalia, and leverages data augmentation and transfer learning to overcome training data scarcity. The detection phase involves investigation of R-CNN and Faster R-CNN networks. The recognition phase includes an attention-based sequence-to-sequence model, with ResNet feature extraction, bidirectional LSTM-based sequence modeling, and attention-based prediction of marginalia. The effectiveness of the proposed framework has been empirically evaluated on the data from early book collections found in the Uppsala University Library in Sweden. Source code and pre-trained models are available at Github.

Yefeng Yuan, Yuhong Liu, Liang Cheng

The rapid advancements in generative AI and large language models (LLMs) have opened up new avenues for producing synthetic data, particularly in the realm of structured tabular formats, such as product reviews. Despite the potential benefits, concerns regarding privacy leakage have surfaced, especially when personal information is utilized in the training datasets. In addition, there is an absence of a comprehensive evaluation framework capable of quantitatively measuring the quality of the generated synthetic data and their utility for downstream tasks. In response to this gap, we introduce SynEval, an open-source evaluation framework designed to assess the fidelity, utility, and privacy preservation of synthetically generated tabular data via a suite of diverse evaluation metrics. We validate the efficacy of our proposed framework - SynEval - by applying it to synthetic product review data generated by three state-of-the-art LLMs: ChatGPT, Claude, and Llama. Our experimental findings illuminate the trade-offs between various evaluation metrics in the context of synthetic data generation. Furthermore, SynEval stands as a critical instrument for researchers and practitioners engaged with synthetic tabular data,, empowering them to judiciously determine the suitability of the generated data for their specific applications, with an emphasis on upholding user privacy.

Liang Cheng, Tianyi Li, Zhaowei Wang et al.

LLMs are often claimed to be capable of Natural Language Inference (NLI), which is widely regarded as a cornerstone of more complex forms of reasoning. However, recent works show that LLMs still suffer from hallucinations in NLI due to attestation bias, where LLMs overly rely on propositional memory to build shortcuts. To solve the issue, we design an unsupervised framework to construct counterfactual reasoning data and fine-tune LLMs to reduce attestation bias. To measure bias reduction, we build bias-adversarial variants of NLI datasets with randomly replaced predicates in premises while keeping hypotheses unchanged. Extensive evaluations show that our framework can significantly reduce hallucinations from attestation bias. Then, we further evaluate LLMs fine-tuned with our framework on original NLI datasets and their bias-neutralized versions, where original entities are replaced with randomly sampled ones. Extensive results show that our framework consistently improves inferential performance on both original and bias-neutralized NLI datasets.

Katherine Berry, Liang Cheng

Graph Neural Networks (GNNs) have gained traction in the complex domain of drug discovery because of their ability to process graph-structured data such as drug molecule models. This approach has resulted in a myriad of methods and models in published literature across several categories of drug discovery research. This paper covers the research categories comprehensively with recent papers, namely molecular property prediction, including drug-target binding affinity prediction, drug-drug interaction study, microbiome interaction prediction, drug repositioning, retrosynthesis, and new drug design, and provides guidance for future work on GNNs for drug discovery.

Liang Cheng, Zhaowei Wang, Mark Steedman

While fine-tuning LLMs on NLI corpora improves their inferential performance, the underlying mechanisms driving this improvement remain largely opaque. In this work, we conduct a series of experiments to investigate what LLMs actually learn during fine-tuning. We begin by analyzing predicate frequencies in premises and hypotheses across NLI datasets and identify a consistent frequency bias, where predicates in hypotheses occur more frequently than those in premises for positive instances. To assess the impact of this bias, we evaluate both standard and NLI fine-tuned LLMs on bias-consistent and bias-adversarial cases. We find that LLMs exploit frequency bias for inference and perform poorly on adversarial instances. Furthermore, fine-tuned LLMs exhibit significantly increased reliance on this bias, suggesting that they are learning these frequency patterns from datasets. Finally, we compute the frequencies of hyponyms and their corresponding hypernyms from WordNet, revealing a correlation between frequency bias and textual entailment. These findings help explain why learning frequency patterns can enhance model performance on inference tasks.

Liang Cheng, Prashant Singh, Francesco Ferranti

The simulation of nanophotonic structures relies on electromagnetic solvers, which play a crucial role in understanding their behavior. However, these solvers often come with a significant computational cost, making their application in design tasks, such as optimization, impractical. To address this challenge, machine learning techniques have been explored for accurate and efficient modeling and design of photonic devices. Deep neural networks, in particular, have gained considerable attention in this field. They can be used to create both forward and inverse models. An inverse modeling approach avoids the need for coupling a forward model with an optimizer and directly performs the prediction of the optimal design parameters values. In this paper, we propose an inverse modeling method for nanophotonic structures, based on a mixture density network model enhanced by transfer learning. Mixture density networks can predict multiple possible solutions at a time including their respective importance as Gaussian distributions. However, multiple challenges exist for mixture density network models. An important challenge is that an upper bound on the number of possible simultaneous solutions needs to be specified in advance. Also, another challenge is that the model parameters must be jointly optimized, which can result computationally expensive. Moreover, optimizing all parameters simultaneously can be numerically unstable and can lead to degenerate predictions. The proposed approach allows overcoming these limitations using transfer learning-based techniques, while preserving a high accuracy in the prediction capability of the design solutions given an optical response as an input. A dimensionality reduction step is also explored. Numerical results validate the proposed method.

Nick McKenna, Tianyi Li, Liang Cheng et al.

Large Language Models (LLMs) are claimed to be capable of Natural Language Inference (NLI), necessary for applied tasks like question answering and summarization. We present a series of behavioral studies on several LLM families (LLaMA, GPT-3.5, and PaLM) which probe their behavior using controlled experiments. We establish two biases originating from pretraining which predict much of their behavior, and show that these are major sources of hallucination in generative LLMs. First, memorization at the level of sentences: we show that, regardless of the premise, models falsely label NLI test samples as entailing when the hypothesis is attested in training data, and that entities are used as ``indices'' to access the memorized data. Second, statistical patterns of usage learned at the level of corpora: we further show a similar effect when the premise predicate is less frequent than that of the hypothesis in the training data, a bias following from previous studies. We demonstrate that LLMs perform significantly worse on NLI test samples which do not conform to these biases than those which do, and we offer these as valuable controls for future LLM evaluation.