11.0IVOct 19, 2021
Cross-Vendor CT Image Data Harmonization Using CVH-CTMd Selim, Jie Zhang, Baowei Fei et al.
While remarkable advances have been made in Computed Tomography (CT), most of the existing efforts focus on imaging enhancement while reducing radiation dose. How to harmonize CT image data captured using different scanners is vital in cross-center large-scale radiomics studies but remains the boundary to explore. Furthermore, the lack of paired training image problem makes it computationally challenging to adopt existing deep learning models. %developed for CT image standardization. %this problem more challenging. We propose a novel deep learning approach called CVH-CT for harmonizing CT images captured using scanners from different vendors. The generator of CVH-CT uses a self-attention mechanism to learn the scanner-related information. We also propose a VGG feature-based domain loss to effectively extract texture properties from unpaired image data to learn the scanner-based texture distributions. The experimental results show that CVH-CT is clearly better than the baselines because of the use of the proposed domain loss, and CVH-CT can effectively reduce the scanner-related variability in terms of radiomic features.
12.9IVJul 3, 2021
CT Image Harmonization for Enhancing Radiomics StudiesMd Selim, Jie Zhang, Baowei Fei et al.
While remarkable advances have been made in Computed Tomography (CT), capturing CT images with non-standardized protocols causes low reproducibility regarding radiomic features, forming a barrier on CT image analysis in a large scale. RadiomicGAN is developed to effectively mitigate the discrepancy caused by using non-standard reconstruction kernels. RadiomicGAN consists of hybrid neural blocks including both pre-trained and trainable layers adopted to learn radiomic feature distributions efficiently. A novel training approach, called Dynamic Window-based Training, has been developed to smoothly transform the pre-trained model to the medical imaging domain. Model performance evaluated using 1401 radiomic features show that RadiomicGAN clearly outperforms the state-of-art image standardization models.
12.9IVApr 2, 2020
STAN-CT: Standardizing CT Image using Generative Adversarial NetworkMd Selim, Jie Zhang, Baowei Fei et al.
Computed tomography (CT) plays an important role in lung malignancy diagnostics and therapy assessment and facilitating precision medicine delivery. However, the use of personalized imaging protocols poses a challenge in large-scale cross-center CT image radiomic studies. We present an end-to-end solution called STAN-CT for CT image standardization and normalization, which effectively reduces discrepancies in image features caused by using different imaging protocols or using different CT scanners with the same imaging protocol. STAN-CT consists of two components: 1) a novel Generative Adversarial Networks (GAN) model that is capable of effectively learning the data distribution of a standard imaging protocol with only a few rounds of generator training, and 2) an automatic DICOM reconstruction pipeline with systematic image quality control that ensure the generation of high-quality standard DICOM images. Experimental results indicate that the training efficiency and model performance of STAN-CT have been significantly improved compared to the state-of-the-art CT image standardization and normalization algorithms.