Han Zhang

Hao Ding, Lalithkumar Seenivasan, Hongchao Shu et al.

Large language model-based (LLM) agents are emerging as a powerful enabler of robust embodied intelligence due to their capability of planning complex action sequences. Sound planning ability is necessary for robust automation in many task domains, but especially in surgical automation. These agents rely on a highly detailed natural language representation of the scene. Thus, to leverage the emergent capabilities of LLM agents for surgical task planning, developing similarly powerful and robust perception algorithms is necessary to derive a detailed scene representation of the environment from visual input. Previous research has focused primarily on enabling LLM-based task planning while adopting simple yet severely limited perception solutions to meet the needs for bench-top experiments, but lacks the critical flexibility to scale to less constrained settings. In this work, we propose an alternate perception approach -- a digital twin (DT)-based machine perception approach that capitalizes on the convincing performance and out-of-the-box generalization of recent vision foundation models. Integrating our DT representation and LLM agent for planning with the dVRK platform, we develop an embodied intelligence system and evaluate its robustness in performing peg transfer and gauze retrieval tasks. Our approach shows strong task performance and generalizability to varied environmental settings. Despite a convincing performance, this work is merely a first step towards the integration of DT representations. Future studies are necessary for the realization of a comprehensive DT framework to improve the interpretability and generalizability of embodied intelligence in surgery.

Han Zhang, Yiqing Shen, Roger D. Soberanis-Mukul et al.

Developing embodied AI for intelligent surgical systems requires safe, controllable environments for continual learning and evaluation. However, safety regulations and operational constraints in operating rooms (ORs) limit embodied agents from freely perceiving and interacting in realistic settings. Digital twins provide high-fidelity, risk-free environments for exploration and training. How we may create photorealistic and dynamic digital representations of ORs that capture relevant spatial, visual, and behavioral complexity remains unclear. We introduce TwinOR, a framework for constructing photorealistic, dynamic digital twins of ORs for embodied AI research. The system reconstructs static geometry from pre-scan videos and continuously models human and equipment motion through multi-view perception of OR activities. The static and dynamic components are fused into an immersive 3D environment that supports controllable simulation and embodied exploration. The proposed framework reconstructs complete OR geometry with centimeter level accuracy while preserving dynamic interaction across surgical workflows, enabling realistic renderings and a virtual playground for embodied AI systems. In our experiments, TwinOR simulates stereo and monocular sensor streams for geometry understanding and visual localization tasks. Models such as FoundationStereo and ORB-SLAM3 on TwinOR-synthesized data achieve performance within their reported accuracy on real indoor datasets, demonstrating that TwinOR provides sensor-level realism sufficient for perception and localization challenges. By establishing a real-to-sim pipeline for constructing dynamic, photorealistic digital twins of OR environments, TwinOR enables the safe, scalable, and data-efficient development and benchmarking of embodied AI, ultimately accelerating the deployment of embodied AI from sim-to-real.

Benjamin D. Killeen, Liam J. Wang, Blanca Inigo et al.

Language promptable X-ray image segmentation would enable greater flexibility for human-in-the-loop workflows in diagnostic and interventional precision medicine. Prior efforts have contributed task-specific models capable of solving problems within a narrow scope, but expanding to broader use requires additional data, annotations, and training time. Recently, language-aligned foundation models (LFMs) -- machine learning models trained on large amounts of highly variable image and text data thus enabling broad applicability -- have emerged as promising tools for automated image analysis. Existing foundation models for medical image analysis focus on scenarios and modalities where large, richly annotated datasets are available. However, the X-ray imaging modality features highly variable image appearance and applications, from diagnostic chest X-rays to interventional fluoroscopy, with varying availability of data. To pave the way toward an LFM for comprehensive and language-aligned analysis of arbitrary medical X-ray images, we introduce FluoroSAM, a language-promptable variant of the Segment Anything Model, trained from scratch on 3M synthetic X-ray images from a wide variety of human anatomies, imaging geometries, and viewing angles. These include pseudo-ground truth masks for 128 organ types and 464 tools with associated text descriptions. FluoroSAM is capable of segmenting myriad anatomical structures and tools based on natural language prompts, thanks to the novel incorporation of vector quantization (VQ) of text embeddings in the training process. We demonstrate FluoroSAM's performance quantitatively on real X-ray images and showcase on several applications how FluoroSAM is a key enabler for rich human-machine interaction in the X-ray image acquisition and analysis context. Code is available at https://github.com/arcadelab/fluorosam.

Alejandra Perez, Han Zhang, Yu-Chun Ku et al.

The operating room (OR) is a complex environment where optimizing workflows is critical to reduce costs and improve patient outcomes. While computer vision approaches for automatic recognition of perioperative events can identify bottlenecks for OR optimization, privacy concerns limit the use of OR videos for automated event detection. We propose a two-stage pipeline for privacy-preserving OR video analysis and event detection. First, we leverage vision foundation models for depth estimation and semantic segmentation to generate de-identified Digital Twins (DT) of the OR from conventional RGB videos. Second, we employ the SafeOR model, a fused two-stream approach that processes segmentation masks and depth maps for OR event detection. Evaluation on an internal dataset of 38 simulated surgical trials with five event classes shows that our DT-based approach achieves performance on par with -- and sometimes better than -- raw RGB video-based models for OR event detection. Digital Twins enable privacy-preserving OR workflow analysis, facilitating the sharing of de-identified data across institutions and potentially enhancing model generalizability by mitigating domain-specific appearance differences.

Zihao Zhu, Tianli Tao, Yitian Tao et al.

The infant brain undergoes rapid development in the first few years after birth.Compared to cross-sectional studies, longitudinal studies can depict the trajectories of infants brain development with higher accuracy, statistical power and flexibility.However, the collection of infant longitudinal magnetic resonance (MR) data suffers a notorious dropout problem, resulting in incomplete datasets with missing time points. This limitation significantly impedes subsequent neuroscience and clinical modeling. Yet, existing deep generative models are facing difficulties in missing brain image completion, due to sparse data and the nonlinear, dramatic contrast/geometric variations in the developing brain. We propose LoCI-DiffCom, a novel Longitudinal Consistency-Informed Diffusion model for infant brain image Completion,which integrates the images from preceding and subsequent time points to guide a diffusion model for generating high-fidelity missing data. Our designed LoCI module can work on highly sparse sequences, relying solely on data from two temporal points. Despite wide separation and diversity between age time points, our approach can extract individualized developmental features while ensuring context-aware consistency. Our experiments on a large infant brain MR dataset demonstrate its effectiveness with consistent performance on missing infant brain MR completion even in big gap scenarios, aiding in better delineation of early developmental trajectories.

Han Zhang, Lalithkumar Seenivasan, Jose L. Porras et al.

Observing surgical practice has historically relied on fixed vantage points or recollections, leaving the egocentric visual perspectives that guide clinical decisions undocumented. Fixed-camera video can capture surgical workflows at the room-scale, but cannot reconstruct what each team member actually saw. Thus, these videos only provide limited insights into how decisions that affect surgical safety, training, and workflow optimization are made. Here we introduce EgoSurg, the first framework to reconstruct the dynamic, egocentric replays for any operating room (OR) staff directly from wall-mounted fixed-camera video, and thus, without intervention to clinical workflow. EgoSurg couples geometry-driven neural rendering with diffusion-based view enhancement, enabling high-visual fidelity synthesis of arbitrary and egocentric viewpoints at any moment. In evaluation across multi-site surgical cases and controlled studies, EgoSurg reconstructs person-specific visual fields and arbitrary viewpoints with high visual quality and fidelity. By transforming existing OR camera infrastructure into a navigable dynamic 3D record, EgoSurg establishes a new foundation for immersive surgical data science, enabling surgical practice to be visualized, experienced, and analyzed from every angle.