Abdelwahed Khamis

Mathilde Papillon, Mustafa Hajij, Helen Jenne et al.

This paper presents the computational challenge on topological deep learning that was hosted within the ICML 2023 Workshop on Topology and Geometry in Machine Learning. The competition asked participants to provide open-source implementations of topological neural networks from the literature by contributing to the python packages TopoNetX (data processing) and TopoModelX (deep learning). The challenge attracted twenty-eight qualifying submissions in its two-month duration. This paper describes the design of the challenge and summarizes its main findings.

Ali Zia, Abdelwahed Khamis, James Nichols et al.

Topological data analysis (TDA) provides insight into data shape. The summaries obtained by these methods are principled global descriptions of multi-dimensional data whilst exhibiting stable properties such as robustness to deformation and noise. Such properties are desirable in deep learning pipelines but they are typically obtained using non-TDA strategies. This is partly caused by the difficulty of combining TDA constructs (e.g. barcode and persistence diagrams) with current deep learning algorithms. Fortunately, we are now witnessing a growth of deep learning applications embracing topologically-guided components. In this survey, we review the nascent field of topological deep learning by first revisiting the core concepts of TDA. We then explore how the use of TDA techniques has evolved over time to support deep learning frameworks, and how they can be integrated into different aspects of deep learning. Furthermore, we touch on TDA usage for analyzing existing deep models; deep topological analytics. Finally, we discuss the challenges and future prospects of topological deep learning.

Shujie Zhang, Tianyue Zheng, Zhe Chen et al.

Hand Pose Estimation (HPE) is crucial to many applications, but conventional cameras-based CM-HPE methods are completely subject to Line-of-Sight (LoS), as cameras cannot capture occluded objects. In this paper, we propose to exploit Radio-Frequency-Vision (RF-vision) capable of bypassing obstacles for achieving occluded HPE, and we introduce OCHID-Fi as the first RF-HPE method with 3D pose estimation capability. OCHID-Fi employs wideband RF sensors widely available on smart devices (e.g., iPhones) to probe 3D human hand pose and extract their skeletons behind obstacles. To overcome the challenge in labeling RF imaging given its human incomprehensible nature, OCHID-Fi employs a cross-modality and cross-domain training process. It uses a pre-trained CM-HPE network and a synchronized CM/RF dataset, to guide the training of its complex-valued RF-HPE network under LoS conditions. It further transfers knowledge learned from labeled LoS domain to unlabeled occluded domain via adversarial learning, enabling OCHID-Fi to generalize to unseen occluded scenarios. Experimental results demonstrate the superiority of OCHID-Fi: it achieves comparable accuracy to CM-HPE under normal conditions while maintaining such accuracy even in occluded scenarios, with empirical evidence for its generalizability to new domains.

Ali Zia, Usman Ali, Umer Ramzan et al.

Deep topological data analysis (TDA) offers a principled framework for capturing structural invariants such as connectivity and cycles that persist across scales, making it a natural fit for anomaly segmentation (AS). Unlike thresholdbased binarisation, which produces brittle masks under distribution shift, TDA allows anomalies to be characterised as disruptions to global structure rather than local fluctuations. We introduce TopoOT, a topology-aware optimal transport (OT) framework that integrates multi-filtration persistence diagrams (PDs) with test-time adaptation (TTA). Our key innovation is Optimal Transport Chaining, which sequentially aligns PDs across thresholds and filtrations, yielding geodesic stability scores that identify features consistently preserved across scales. These stabilityaware pseudo-labels supervise a lightweight head trained online with OT-consistency and contrastive objectives, ensuring robust adaptation under domain shift. Across standard 2D and 3D anomaly detection benchmarks, TopoOT achieves state-of-the-art performance, outperforming the most competitive methods by up to +24.1% mean F1 on 2D datasets and +10.2% on 3D AS benchmarks.

Ali Cheraghian, Hamidreza Dastmalchi, Abdelwahed Khamis et al.

Video reasoning segmentation requires localizing objects across video frames from natural language expressions, often involving spatial reasoning and implicit references. Recent approaches leverage frozen large vision-language models (LVLMs) by extracting attention maps and using them as spatial priors for segmentation, enabling training-free grounding. However, these attention maps are optimized for text generation rather than spatial localization, often resulting in diffuse and ambiguous grounding signals. In this work, we introduce SteerSeg, a lightweight framework that identifies attention misalignment as the key bottleneck in attention-based grounding and proposes to steer attention at its source through input-level conditioning. SteerSeg combines learnable soft prompts with reasoning-guided Chain-of-Thought (CoT) prompting. The soft prompts reshape the attention distribution to produce more spatially concentrated maps, while CoT-derived attributes resolve ambiguity among similar objects by guiding attention toward the correct instance. The resulting attention maps are converted into point prompts across keyframes to guide a segmentation model, while candidate tracklets are ranked and selected using correlation-based scoring. Our approach freezes the LVLM and segmentation model parameters and learns only a small set of soft prompts, preserving the model's pretrained reasoning capabilities while significantly improving grounding. Despite being trained only on Ref-YouTube-VOS, SteerSeg generalizes well across diverse benchmarks, significantly improving the spatial grounding capability of LVLMs. Project page: https://steerseg.github.io

Jia Syuen Lim, Ziwei Wang, Jiajun Liu et al.

Regulatory compliance auditing across diverse industrial domains requires heightened quality assurance and traceability. Present manual and intermittent approaches to such auditing yield significant challenges, potentially leading to oversights in the monitoring process. To address these issues, we introduce a real-time, multi-modal sensing system employing 3D time-of-flight and RGB cameras, coupled with unsupervised learning techniques on edge AI devices. This enables continuous object tracking thereby enhancing efficiency in record-keeping and minimizing manual interventions. While we validate the system in a knife sanitization context within agrifood facilities, emphasizing its prowess against occlusion and low-light issues with RGB cameras, its potential spans various industrial monitoring settings.

Abdelwahed Khamis, Russell Tsuchida, Mohamed Tarek et al.

Optimal Transport (OT) is a mathematical framework that first emerged in the eighteenth century and has led to a plethora of methods for answering many theoretical and applied questions. The last decade has been a witness to the remarkable contributions of this classical optimization problem to machine learning. This paper is about where and how optimal transport is used in machine learning with a focus on the question of scalable optimal transport. We provide a comprehensive survey of optimal transport while ensuring an accessible presentation as permitted by the nature of the topic and the context. First, we explain the optimal transport background and introduce different flavors (i.e., mathematical formulations), properties, and notable applications. We then address the fundamental question of how to scale optimal transport to cope with the current demands of big and high dimensional data. We conduct a systematic analysis of the methods used in the literature for scaling OT and present the findings in a unified taxonomy. We conclude with presenting some open challenges and discussing potential future research directions. A live repository of related OT research papers is maintained in https://github.com/abdelwahed/OT_for_big_data.git

Ali Zia, Muhammad Umer Ramzan, Usman Ali et al.

Translating freehand sketches into photorealistic images remains a fundamental challenge in image synthesis, particularly due to the abstract, sparse, and stylistically diverse nature of sketches. Existing approaches, including GAN-based and diffusion-based models, often struggle to reconstruct fine-grained details, maintain spatial alignment, or adapt across different sketch domains. In this paper, we propose a component-aware, self-refining framework for sketch-to-image generation that addresses these challenges through a novel two-stage architecture. A Self-Attention-based Autoencoder Network (SA2N) first captures localised semantic and structural features from component-wise sketch regions, while a Coordinate-Preserving Gated Fusion (CGF) module integrates these into a coherent spatial layout. Finally, a Spatially Adaptive Refinement Revisor (SARR), built on a modified StyleGAN2 backbone, enhances realism and consistency through iterative refinement guided by spatial context. Extensive experiments across both facial (CelebAMask-HQ, CUFSF) and non-facial (Sketchy, ChairsV2, ShoesV2) datasets demonstrate the robustness and generalizability of our method. The proposed framework consistently outperforms state-of-the-art GAN and diffusion models, achieving significant gains in image fidelity, semantic accuracy, and perceptual quality. On CelebAMask-HQ, our model improves over prior methods by 21% (FID), 58% (IS), 41% (KID), and 20% (SSIM). These results, along with higher efficiency and visual coherence across diverse domains, position our approach as a strong candidate for applications in forensics, digital art restoration, and general sketch-based image synthesis.

Muhammad Umer Ramzan, Ali Zia, Abdelwahed Khamis et al.

This paper presents a novel deep-learning framework that significantly enhances the transformation of rudimentary face sketches into high-fidelity colour images. Employing a Convolutional Block Attention-based Auto-encoder Network (CA2N), our approach effectively captures and enhances critical facial features through a block attention mechanism within an encoder-decoder architecture. Subsequently, the framework utilises a noise-induced conditional Generative Adversarial Network (cGAN) process that allows the system to maintain high performance even on domains unseen during the training. These enhancements lead to considerable improvements in image realism and fidelity, with our model achieving superior performance metrics that outperform the best method by FID margin of 17, 23, and 38 on CelebAMask-HQ, CUHK, and CUFSF datasets; respectively. The model sets a new state-of-the-art in sketch-to-image generation, can generalize across sketch types, and offers a robust solution for applications such as criminal identification in law enforcement.

Ahmed Akl, Abdelwahed Khamis, Ali Cheraghian et al.

Large Vision-Language Models (LVLMs) have demonstrated impressive multimodal understanding capabilities, yet they remain prone to object hallucination, where models describe non-existent objects or attribute incorrect factual information, raising serious concerns for reliable real-world deployment. While fine-tuning is a commonly adopted mitigation strategy, its high computational cost and practical difficulty motivate the need for training-free alternatives, among which model editing has recently emerged as a promising direction. However, indiscriminate editing risks disrupting the rich implicit knowledge encoded in pre-trained LVLMs, leading to a fundamental question: how much intervention is necessary at each layer to suppress hallucinations while preserving pre-trained knowledge? To address this question, we present a systematic analysis of LVLM decoders built on three widely used large language model backbones-Qwen, LLaMA, and Vicuna-revealing clear layer-wise differences in susceptibility to object hallucination. Building on these insights, we introduce the Hallucination Insensitivity Score (HIS), a principled metric that quantifies each layer's sensitivity to hallucination and provides guidance for targeted intervention. Leveraging HIS, we propose Hallucination Insensitivity Model Editing (HIME), a simple yet effective layer-adaptive weight editing approach that selectively modifies latent features to suppress hallucinations while preserving pre-trained knowledge. Extensive experiments demonstrate that HIME reduces hallucinations by an average of 61.8% across open-ended generation benchmarks, including CHAIR, MME, and GPT-4V-aided evaluation, without introducing additional parameters, inference-time latency, or computational overhead.

Muhammad Umer Ramzan, Ali Zia, Abdelwahed Khamis et al.

Salient object detection (SOD) aims to segment visually prominent regions in images and serves as a foundational task for various computer vision applications. We posit that SOD can now reach near-supervised accuracy without a single pixel-level label, but only when reliable pseudo-masks are available. We revisit the prototype-based line of work and make two key observations. First, boundary pixels and interior pixels obey markedly different geometry; second, the global consistency enforced by optimal transport (OT) is underutilized if prototype quality is weak. To address this, we introduce POTNet, an adaptation of Prototypical Optimal Transport that replaces POT's single k-means step with an entropy-guided dual-clustering head: high-entropy pixels are organized by spectral clustering, low-entropy pixels by k-means, and the two prototype sets are subsequently aligned by OT. This split-fuse-transport design yields sharper, part-aware pseudo-masks in a single forward pass, without handcrafted priors. Those masks supervise a standard MaskFormer-style encoder-decoder, giving rise to AutoSOD, an end-to-end unsupervised SOD pipeline that eliminates SelfMask's offline voting yet improves both accuracy and training efficiency. Extensive experiments on five benchmarks show that AutoSOD outperforms unsupervised methods by up to 26% and weakly supervised methods by up to 36% in F-measure, further narrowing the gap to fully supervised models.

Ali Zia, Renuka Sharma, Abdelwahed Khamis et al.

This review provides an in-depth exploration of the field of animal action recognition, focusing on coarse-grained (CG) and fine-grained (FG) techniques. The primary aim is to examine the current state of research in animal behaviour recognition and to elucidate the unique challenges associated with recognising subtle animal actions in outdoor environments. These challenges differ significantly from those encountered in human action recognition due to factors such as non-rigid body structures, frequent occlusions, and the lack of large-scale, annotated datasets. The review begins by discussing the evolution of human action recognition, a more established field, highlighting how it progressed from broad, coarse actions in controlled settings to the demand for fine-grained recognition in dynamic environments. This shift is particularly relevant for animal action recognition, where behavioural variability and environmental complexity present unique challenges that human-centric models cannot fully address. The review then underscores the critical differences between human and animal action recognition, with an emphasis on high intra-species variability, unstructured datasets, and the natural complexity of animal habitats. Techniques like spatio-temporal deep learning frameworks (e.g., SlowFast) are evaluated for their effectiveness in animal behaviour analysis, along with the limitations of existing datasets. By assessing the strengths and weaknesses of current methodologies and introducing a recently-published dataset, the review outlines future directions for advancing fine-grained action recognition, aiming to improve accuracy and generalisability in behaviour analysis across species.

Abdelwahed Khamis, Sara Khalifa

Real-world sensing challenges such as sensor failures, communication issues, and power constraints lead to data intermittency. An issue that is known to undermine the traditional classification task that assumes a continuous data stream. Previous works addressed this issue by designing bespoke solutions (i.e. task-specific and/or modality-specific imputation). These approaches, while effective for their intended purposes, had limitations in their applicability across different tasks and sensor modalities. This raises an important question: Can we build a task-agnostic imputation pipeline that is transferable to new sensors without requiring additional training? In this work, we formalise the concept of zero-shot imputation and propose a novel approach that enables the adaptation of pre-trained models to handle data intermittency. This framework, named NeuralPrefix, is a generative neural component that precedes a task model during inference, filling in gaps caused by data intermittency. NeuralPrefix is built as a continuous dynamical system, where its internal state can be estimated at any point in time by solving an Ordinary Differential Equation (ODE). This approach allows for a more versatile and adaptable imputation method, overcoming the limitations of task-specific and modality-specific solutions. We conduct a comprehensive evaluation of NeuralPrefix on multiple sensory datasets, demonstrating its effectiveness across various domains. When tested on intermittent data with a high 50% missing data rate, NeuralPreifx accurately recovers all the missing samples, achieving SSIM score between 0.93-0.96. Zero-shot evaluations show that NeuralPrefix generalises well to unseen datasets, even when the measurements come from a different modality.

Ahmed Akl, Abdelwahed Khamis, Zhe Wang et al.

Visual Question Answering (VQA) systems are known for their poor performance in out-of-distribution datasets. An issue that was addressed in previous works through ensemble learning, answer re-ranking, or artificially growing the training set. In this work, we show for the first time that robust Visual Question Answering is attainable by simply enhancing the training strategy. Our proposed approach, Task Progressive Curriculum Learning (TPCL), breaks the main VQA problem into smaller, easier tasks based on the question type. Then, it progressively trains the model on a (carefully crafted) sequence of tasks. We further support the method by a novel distributional-based difficulty measurer. Our approach is conceptually simple, model-agnostic, and easy to implement. We demonstrate TPCL effectiveness through a comprehensive evaluation on standard datasets. Without either data augmentation or explicit debiasing mechanism, it achieves state-of-the-art on VQA-CP v2, VQA-CP v1 and VQA v2 datasets. Extensive experiments demonstrate that TPCL outperforms the most competitive robust VQA approaches by more than 5% and 7% on VQA-CP v2 and VQA-CP v1; respectively. TPCL also can boost VQA baseline backbone performance by up to 28.5%.

Isura Nirmal, Abdelwahed Khamis, Mahbub Hassan et al.

While decade-long research has clearly demonstrated the vast potential of radio frequency (RF) for many human sensing tasks, scaling this technology to large scenarios remained problematic with conventional approaches. Recently, researchers have successfully applied deep learning to take radio-based sensing to a new level. Many different types of deep learning models have been proposed to achieve high sensing accuracy over a large population and activity set, as well as in unseen environments. Deep learning has also enabled detection of novel human sensing phenomena that were previously not possible. In this survey, we provide a comprehensive review and taxonomy of recent research efforts on deep learning based RF sensing. We also identify and compare several publicly released labeled RF sensing datasets that can facilitate such deep learning research. Finally, we summarize the lessons learned and discuss the current limitations and future directions of deep learning based RF sensing.

Qi Lin, Weitao Xu, Jun Liu et al.

We present Heartbeats-2-Bits (H2B), which is a system for securely pairing wearable devices by generating a shared secret key from the skin vibrations caused by heartbeat. This work is motivated by potential power saving opportunity arising from the fact that heartbeat intervals can be detected energy-efficiently using inexpensive and power-efficient piezo sensors, which obviates the need to employ complex heartbeat monitors such as Electrocardiogram or Photoplethysmogram. Indeed, our experiments show that piezo sensors can measure heartbeat intervals on many different body locations including chest, wrist, waist, neck and ankle. Unfortunately, we also discover that the heartbeat interval signal captured by piezo vibration sensors has low Signal-to-Noise Ratio (SNR) because they are not designed as precision heartbeat monitors, which becomes the key challenge for H2B. To overcome this problem, we first apply a quantile function-based quantization method to fully extract the useful entropy from the noisy piezo measurements. We then propose a novel Compressive Sensing-based reconciliation method to correct the high bit mismatch rates between the two independently generated keys caused by low SNR. We prototype H2B using off-the-shelf piezo sensors and evaluate its performance on a dataset collected from different body positions of 23 participants. Our results show that H2B has an overwhelming pairing success rate of 95.6%. We also analyze and demonstrate H2B's robustness against three types of attacks. Finally, our power measurements show that H2B is very power-efficient.