LGFeb 6, 2023
When the Ground Truth is not True: Modelling Human Biases in Temporal AnnotationsTaku Yamagata, Emma L. Tonkin, Benjamin Arana Sanchez et al.
In supervised learning, low quality annotations lead to poorly performing classification and detection models, while also rendering evaluation unreliable. This is particularly apparent on temporal data, where annotation quality is affected by multiple factors. For example, in the post-hoc self-reporting of daily activities, cognitive biases are one of the most common ingredients. In particular, reporting the start and duration of an activity after its finalisation may incorporate biases introduced by personal time perceptions, as well as the imprecision and lack of granularity due to time rounding. Here we propose a method to model human biases on temporal annotations and argue for the use of soft labels. Experimental results in synthetic data show that soft labels provide a better approximation of the ground truth for several metrics. We showcase the method on a real dataset of daily activities.
CVJul 14, 2022
Inertial Hallucinations -- When Wearable Inertial Devices Start Seeing ThingsAlessandro Masullo, Toby Perrett, Tilo Burghardt et al.
We propose a novel approach to multimodal sensor fusion for Ambient Assisted Living (AAL) which takes advantage of learning using privileged information (LUPI). We address two major shortcomings of standard multimodal approaches, limited area coverage and reduced reliability. Our new framework fuses the concept of modality hallucination with triplet learning to train a model with different modalities to handle missing sensors at inference time. We evaluate the proposed model on inertial data from a wearable accelerometer device, using RGB videos and skeletons as privileged modalities, and show an improvement of accuracy of an average 6.6% on the UTD-MHAD dataset and an average 5.5% on the Berkeley MHAD dataset, reaching a new state-of-the-art for inertial-only classification accuracy on these datasets. We validate our framework through several ablation studies.
SPAug 3, 2023
Multimodal Indoor Localisation in Parkinson's Disease for Detecting Medication Use: Observational Pilot Study in a Free-Living SettingFerdian Jovan, Catherine Morgan, Ryan McConville et al.
Parkinson's disease (PD) is a slowly progressive, debilitating neurodegenerative disease which causes motor symptoms including gait dysfunction. Motor fluctuations are alterations between periods with a positive response to levodopa therapy ("on") and periods marked by re-emergency of PD symptoms ("off") as the response to medication wears off. These fluctuations often affect gait speed and they increase in their disabling impact as PD progresses. To improve the effectiveness of current indoor localisation methods, a transformer-based approach utilising dual modalities which provide complementary views of movement, Received Signal Strength Indicator (RSSI) and accelerometer data from wearable devices, is proposed. A sub-objective aims to evaluate whether indoor localisation, including its in-home gait speed features (i.e. the time taken to walk between rooms), could be used to evaluate motor fluctuations by detecting whether the person with PD is taking levodopa medications or withholding them. To properly evaluate our proposed method, we use a free-living dataset where the movements and mobility are greatly varied and unstructured as expected in real-world conditions. 24 participants lived in pairs (consisting of one person with PD, one control) for five days in a smart home with various sensors. Our evaluation on the resulting dataset demonstrates that our proposed network outperforms other methods for indoor localisation. The sub-objective evaluation shows that precise room-level localisation predictions, transformed into in-home gait speed features, produce accurate predictions on whether the PD participant is taking or withholding their medications.
LGMay 12, 2022
Multimodal Indoor Localisation for Measuring Mobility in Parkinson's Disease using TransformersFerdian Jovan, Ryan McConville, Catherine Morgan et al.
Parkinson's disease (PD) is a slowly progressive debilitating neurodegenerative disease which is prominently characterised by motor symptoms. Indoor localisation, including number and speed of room to room transitions, provides a proxy outcome which represents mobility and could be used as a digital biomarker to quantify how mobility changes as this disease progresses. We use data collected from 10 people with Parkinson's, and 10 controls, each of whom lived for five days in a smart home with various sensors. In order to more effectively localise them indoors, we propose a transformer-based approach utilizing two data modalities, Received Signal Strength Indicator (RSSI) and accelerometer data from wearable devices, which provide complementary views of movement. Our approach makes asymmetric and dynamic correlations by a) learning temporal correlations at different scales and levels, and b) utilizing various gating mechanisms to select relevant features within modality and suppress unnecessary modalities. On a dataset with real patients, we demonstrate that our proposed method gives an average accuracy of 89.9%, outperforming competitors. We also show that our model is able to better predict in-home mobility for people with Parkinson's with an average offset of 1.13 seconds to ground truth.
LGAug 16, 2019Code
N2D: (Not Too) Deep Clustering via Clustering the Local Manifold of an Autoencoded EmbeddingRyan McConville, Raul Santos-Rodriguez, Robert J Piechocki et al.
Deep clustering has increasingly been demonstrating superiority over conventional shallow clustering algorithms. Deep clustering algorithms usually combine representation learning with deep neural networks to achieve this performance, typically optimizing a clustering and non-clustering loss. In such cases, an autoencoder is typically connected with a clustering network, and the final clustering is jointly learned by both the autoencoder and clustering network. Instead, we propose to learn an autoencoded embedding and then search this further for the underlying manifold. For simplicity, we then cluster this with a shallow clustering algorithm, rather than a deeper network. We study a number of local and global manifold learning methods on both the raw data and autoencoded embedding, concluding that UMAP in our framework is best able to find the most clusterable manifold in the embedding, suggesting local manifold learning on an autoencoded embedding is effective for discovering higher quality discovering clusters. We quantitatively show across a range of image and time-series datasets that our method has competitive performance against the latest deep clustering algorithms, including out-performing current state-of-the-art on several. We postulate that these results show a promising research direction for deep clustering. The code can be found at https://github.com/rymc/n2d
LGDec 12, 2024
Optimising TinyML with Quantization and Distillation of Transformer and Mamba Models for Indoor Localisation on Edge DevicesThanaphon Suwannaphong, Ferdian Jovan, Ian Craddock et al.
This paper proposes small and efficient machine learning models (TinyML) for resource-constrained edge devices, specifically for on-device indoor localisation. Typical approaches for indoor localisation rely on centralised remote processing of data transmitted from lower powered devices such as wearables. However, there are several benefits for moving this to the edge device itself, including increased battery life, enhanced privacy, reduced latency and lowered operational costs, all of which are key for common applications such as health monitoring. The work focuses on model compression techniques, including quantization and knowledge distillation, to significantly reduce the model size while maintaining high predictive performance. We base our work on a large state-of-the-art transformer-based model and seek to deploy it within low-power MCUs. We also propose a state-space-based architecture using Mamba as a more compact alternative to the transformer. Our results show that the quantized transformer model performs well within a 64 KB RAM constraint, achieving an effective balance between model size and localisation precision. Additionally, the compact Mamba model has strong performance under even tighter constraints, such as a 32 KB of RAM, without the need for model compression, making it a viable option for more resource-limited environments. We demonstrate that, through our framework, it is feasible to deploy advanced indoor localisation models onto low-power MCUs with restricted memory limitations. The application of these TinyML models in healthcare has the potential to revolutionize patient monitoring by providing accurate, real-time location data while minimizing power consumption, increasing data privacy, improving latency and reducing infrastructure costs.
LGDec 12, 2024
Transfer Learning of RSSI to Improve Indoor Localisation PerformanceThanaphon Suwannaphong, Ryan McConville, Ian Craddock
With the growing demand for health monitoring systems, in-home localisation is essential for tracking patient conditions. The unique spatial characteristics of each house required annotated data for Bluetooth Low Energy (BLE) Received Signal Strength Indicator (RSSI)-based monitoring system. However, collecting annotated training data is time-consuming, particularly for patients with limited health conditions. To address this, we propose Conditional Generative Adversarial Networks (ConGAN)-based augmentation, combined with our transfer learning framework (T-ConGAN), to enable the transfer of generic RSSI information between different homes, even when data is collected using different experimental protocols. This enhances the performance and scalability of such intelligent systems by reducing the need for annotation in each home. We are the first to demonstrate that BLE RSSI data can be shared across different homes, and that shared information can improve the indoor localisation performance. Our T-ConGAN enhances the macro F1 score of room-level indoor localisation by up to 12.2%, with a remarkable 51% improvement in challenging areas such as stairways or outside spaces. This state-of-the-art RSSI augmentation model significantly enhances the robustness of in-home health monitoring systems.
CYJul 3, 2020
Detecting Signatures of Early-stage Dementia with Behavioural Models Derived from Sensor DataRafael Poyiadzi, Weisong Yang, Yoav Ben-Shlomo et al.
There is a pressing need to automatically understand the state and progression of chronic neurological diseases such as dementia. The emergence of state-of-the-art sensing platforms offers unprecedented opportunities for indirect and automatic evaluation of disease state through the lens of behavioural monitoring. This paper specifically seeks to characterise behavioural signatures of mild cognitive impairment (MCI) and Alzheimer's disease (AD) in the \textit{early} stages of the disease. We introduce bespoke behavioural models and analyses of key symptoms and deploy these on a novel dataset of longitudinal sensor data from persons with MCI and AD. We present preliminary findings that show the relationship between levels of sleep quality and wandering can be subtly different between patients in the early stages of dementia and healthy cohabiting controls.
APJun 25, 2018
Online Heart Rate Prediction using Acceleration from a Wrist Worn WearableRyan McConville, Gareth Archer, Ian Craddock et al.
In this paper we study the prediction of heart rate from acceleration using a wrist worn wearable. Although existing photoplethysmography (PPG) heart rate sensors provide reliable measurements, they use considerably more energy than accelerometers and have a major impact on battery life of wearable devices. By using energy-efficient accelerometers to predict heart rate, significant energy savings can be made. Further, we are interested in understanding patient recovery after a heart rate intervention, where we expect a variation in heart rate over time. Therefore, we propose an online approach to tackle the concept as time passes. We evaluate the methods on approximately 4 weeks of free living data from three patients over a number of months. We show that our approach can achieve good predictive performance (e.g., 2.89 Mean Absolute Error) while using the PPG heart rate sensor infrequently (e.g., 20.25% of the samples).
MLFeb 4, 2017
Probabilistic Sensor Fusion for Ambient Assisted LivingTom Diethe, Niall Twomey, Meelis Kull et al.
There is a widely-accepted need to revise current forms of health-care provision, with particular interest in sensing systems in the home. Given a multiple-modality sensor platform with heterogeneous network connectivity, as is under development in the Sensor Platform for HEalthcare in Residential Environment (SPHERE) Interdisciplinary Research Collaboration (IRC), we face specific challenges relating to the fusion of the heterogeneous sensor modalities. We introduce Bayesian models for sensor fusion, which aims to address the challenges of fusion of heterogeneous sensor modalities. Using this approach we are able to identify the modalities that have most utility for each particular activity, and simultaneously identify which features within that activity are most relevant for a given activity. We further show how the two separate tasks of location prediction and activity recognition can be fused into a single model, which allows for simultaneous learning an prediction for both tasks. We analyse the performance of this model on data collected in the SPHERE house, and show its utility. We also compare against some benchmark models which do not have the full structure,and show how the proposed model compares favourably to these methods
CVJul 27, 2016
Calorie Counter: RGB-Depth Visual Estimation of Energy Expenditure at HomeLili Tao, Tilo Burghardt, Majid Mirmehdi et al.
We present a new framework for vision-based estimation of calorific expenditure from RGB-D data - the first that is validated on physical gas exchange measurements and applied to daily living scenarios. Deriving a person's energy expenditure from sensors is an important tool in tracking physical activity levels for health and lifestyle monitoring. Most existing methods use metabolic lookup tables (METs) for a manual estimate or systems with inertial sensors which ultimately require users to wear devices. In contrast, the proposed pose-invariant and individual-independent vision framework allows for a remote estimation of calorific expenditure. We introduce, and evaluate our approach on, a new dataset called SPHERE-calorie, for which visual estimates can be compared against simultaneously obtained, indirect calorimetry measures based on gas exchange. % based on per breath gas exchange. We conclude from our experiments that the proposed vision pipeline is suitable for home monitoring in a controlled environment, with calorific expenditure estimates above accuracy levels of commonly used manual estimations via METs. With the dataset released, our work establishes a baseline for future research for this little-explored area of computer vision.
CYMar 2, 2016
The SPHERE Challenge: Activity Recognition with Multimodal Sensor DataNiall Twomey, Tom Diethe, Meelis Kull et al.
This paper outlines the Sensor Platform for HEalthcare in Residential Environment (SPHERE) project and details the SPHERE challenge that will take place in conjunction with European Conference on Machine Learning and Principles and Practice of Knowledge Discovery (ECML-PKDD) between March and July 2016. The SPHERE challenge is an activity recognition competition where predictions are made from video, accelerometer and environmental sensors. Monetary prizes will be awarded to the top three entrants, with Euro 1,000 being awarded to the winner, Euro 600 being awarded to the first runner up, and Euro 400 being awarded to the second runner up.
HCAug 11, 2014
Sensors for healthcare: Would you want them in your home?Alison Burrows, Rachel Gooberman-Hill, Ian Craddock et al.
This paper describes some of the challenges set within SPHERE, a large-scale Interdisciplinary Research Collaboration that aims to develop sensor systems to monitor people's health and wellbeing in the home. In particular we discuss the dual task facing the User- Centered Design research group, to ensure the development of inclusive and desirable domestic healthcare technology. On the one hand, we seek to gain a rich understanding of the many envisaged users of the SPHERE system. On the other hand, for the user experience requirements to be translated into tangible outputs, it is crucial that we effectively communicate these findings to the broader team of SPHERE engineers and computer scientists.
HCFeb 2, 2014
SPHERE: Meaningful and Inclusive Sensor-Based Home HealthcareAlison Burrows, Rachel Gooberman-Hill, Ian Craddock et al.
Given current demographic and health trends, and their economic implications, home healthcare technology has become a fertile area for research and development. Motivated by the need for a radical reform of healthcare provision, SPHERE is a large-scale Interdisciplinary Research Collaboration that aims to develop home sensor systems to monitor people's health and wellbeing in the home. This paper outlines the unique circumstances of designing healthcare technology for the home environment, with a particular focus on how to ensure future systems are meaningful to and desirable for the intended users.