Jianguo Chen

Ziqi Gao, Yuntao Wang, Jianguo Chen et al.

Multimodal sensors provide complementary information to develop accurate machine-learning methods for human activity recognition (HAR), but introduce significantly higher computational load, which reduces efficiency. This paper proposes an efficient multimodal neural architecture for HAR using an RGB camera and inertial measurement units (IMUs) called Multimodal Temporal Segment Attention Network (MMTSA). MMTSA first transforms IMU sensor data into a temporal and structure-preserving gray-scale image using the Gramian Angular Field (GAF), representing the inherent properties of human activities. MMTSA then applies a multimodal sparse sampling method to reduce data redundancy. Lastly, MMTSA adopts an inter-segment attention module for efficient multimodal fusion. Using three well-established public datasets, we evaluated MMTSA's effectiveness and efficiency in HAR. Results show that our method achieves superior performance improvements 11.13% of cross-subject F1-score on the MMAct dataset than the previous state-of-the-art (SOTA) methods. The ablation study and analysis suggest that MMTSA's effectiveness in fusing multimodal data for accurate HAR. The efficiency evaluation on an edge device showed that MMTSA achieved significantly better accuracy, lower computational load, and lower inference latency than SOTA methods.

Zeju Cai, Jianguo Chen, Yuting Fan et al.

Federated learning (FL) is a distributed machine learning approach that protects user data privacy by training models locally on clients and aggregating them on a parameter server. While effective at preserving privacy, FL systems face limitations such as single points of failure, lack of incentives, and inadequate security. To address these challenges, blockchain technology is integrated into FL systems to provide stronger security, fairness, and scalability. However, blockchain-empowered FL (BC-FL) systems introduce additional demands on network, computing, and storage resources. This survey provides a comprehensive review of recent research on BC-FL systems, analyzing the benefits and challenges associated with blockchain integration. We explore why blockchain is applicable to FL, how it can be implemented, and the challenges and existing solutions for its integration. Additionally, we offer insights on future research directions for the BC-FL system.

Mingda Xu, Peisheng Qian, Ziyuan Zhao et al.

Protein-protein interactions (PPIs) play key roles in a broad range of biological processes. Numerous strategies have been proposed for predicting PPIs, and among them, graph-based methods have demonstrated promising outcomes owing to the inherent graph structure of PPI networks. This paper reviews various graph-based methodologies, and discusses their applications in PPI prediction. We classify these approaches into two primary groups based on their model structures. The first category employs Graph Neural Networks (GNN) or Graph Convolutional Networks (GCN), while the second category utilizes Graph Attention Networks (GAT), Graph Auto-Encoders and Graph-BERT. We highlight the distinctive methodologies of each approach in managing the graph-structured data inherent in PPI networks and anticipate future research directions in this domain.

Jianguo Chen, Kenli Li, Keqin Li et al.

Benefiting from convenient cycling and flexible parking locations, the Dockless Public Bicycle-sharing (DL-PBS) network becomes increasingly popular in many countries. However, redundant and low-utility stations waste public urban space and maintenance costs of DL-PBS vendors. In this paper, we propose a Bicycle Station Dynamic Planning (BSDP) system to dynamically provide the optimal bicycle station layout for the DL-PBS network. The BSDP system contains four modules: bicycle drop-off location clustering, bicycle-station graph modeling, bicycle-station location prediction, and bicycle-station layout recommendation. In the bicycle drop-off location clustering module, candidate bicycle stations are clustered from each spatio-temporal subset of the large-scale cycling trajectory records. In the bicycle-station graph modeling module, a weighted digraph model is built based on the clustering results and inferior stations with low station revenue and utility are filtered. Then, graph models across time periods are combined to create a graph sequence model. In the bicycle-station location prediction module, the GGNN model is used to train the graph sequence data and dynamically predict bicycle stations in the next period. In the bicycle-station layout recommendation module, the predicted bicycle stations are fine-tuned according to the government urban management plan, which ensures that the recommended station layout is conducive to city management, vendor revenue, and user convenience. Experiments on actual DL-PBS networks verify the effectiveness, accuracy and feasibility of the proposed BSDP system.

Jianguo Chen, Philip S. Yu

As one type of efficient unsupervised learning methods, clustering algorithms have been widely used in data mining and knowledge discovery with noticeable advantages. However, clustering algorithms based on density peak have limited clustering effect on data with varying density distribution (VDD), equilibrium distribution (ED), and multiple domain-density maximums (MDDM), leading to the problems of sparse cluster loss and cluster fragmentation. To address these problems, we propose a Domain-Adaptive Density Clustering (DADC) algorithm, which consists of three steps: domain-adaptive density measurement, cluster center self-identification, and cluster self-ensemble. For data with VDD features, clusters in sparse regions are often neglected by using uniform density peak thresholds, which results in the loss of sparse clusters. We define a domain-adaptive density measurement method based on K-Nearest Neighbors (KNN) to adaptively detect the density peaks of different density regions. We treat each data point and its KNN neighborhood as a subgroup to better reflect its density distribution in a domain view. In addition, for data with ED or MDDM features, a large number of density peaks with similar values can be identified, which results in cluster fragmentation. We propose a cluster center self-identification and cluster self-ensemble method to automatically extract the initial cluster centers and merge the fragmented clusters. Experimental results demonstrate that compared with other comparative algorithms, the proposed DADC algorithm can obtain more reasonable clustering results on data with VDD, ED and MDDM features. Benefitting from a few parameter requirements and non-iterative nature, DADC achieves low computational complexity and is suitable for large-scale data clustering.

Jianguo Chen, Kenli Li, Qingying Deng et al.

In this paper, we propose a Distributed Intelligent Video Surveillance (DIVS) system using Deep Learning (DL) algorithms and deploy it in an edge computing environment. We establish a multi-layer edge computing architecture and a distributed DL training model for the DIVS system. The DIVS system can migrate computing workloads from the network center to network edges to reduce huge network communication overhead and provide low-latency and accurate video analysis solutions. We implement the proposed DIVS system and address the problems of parallel training, model synchronization, and workload balancing. Task-level parallel and model-level parallel training methods are proposed to further accelerate the video analysis process. In addition, we propose a model parameter updating method to achieve model synchronization of the global DL model in a distributed EC environment. Moreover, a dynamic data migration approach is proposed to address the imbalance of workload and computational power of edge nodes. Experimental results showed that the EC architecture can provide elastic and scalable computing power, and the proposed DIVS system can efficiently handle video surveillance and analysis tasks.

Jianguo Chen, Kenli Li, Kashif Bilal et al.

Protein interactions constitute the fundamental building block of almost every life activity. Identifying protein communities from Protein-Protein Interaction (PPI) networks is essential to understand the principles of cellular organization and explore the causes of various diseases. It is critical to integrate multiple data resources to identify reliable protein communities that have biological significance and improve the performance of community detection methods for large-scale PPI networks. In this paper, we propose a Multi-source Learning based Protein Community Detection (MLPCD) algorithm by integrating Gene Expression Data (GED) and a parallel solution of MLPCD using cloud computing technology. To effectively discover the biological functions of proteins that participating in different cellular processes, GED under different conditions is integrated with the original PPI network to reconstruct a Weighted-PPI (WPPI) network. To flexibly identify protein communities of different scales, we define community modularity and functional cohesion measurements and detect protein communities from WPPI using an agglomerative method. In addition, we respectively compare the detected communities with known protein complexes and evaluate the functional enrichment of protein function modules using Gene Ontology annotations. Moreover, we implement a parallel version of the MLPCD algorithm on the Apache Spark platform to enhance the performance of the algorithm for large-scale realistic PPI networks. Extensive experimental results indicate the superiority and notable advantages of the MLPCD algorithm over the relevant algorithms in terms of accuracy and performance.

Jianguo Chen, Kenli Li, Huigui Rong et al.

In the era of big data, practical applications in various domains continually generate large-scale time-series data. Among them, some data show significant or potential periodicity characteristics, such as meteorological and financial data. It is critical to efficiently identify the potential periodic patterns from massive time-series data and provide accurate predictions. In this paper, a Periodicity-based Parallel Time Series Prediction (PPTSP) algorithm for large-scale time-series data is proposed and implemented in the Apache Spark cloud computing environment. To effectively handle the massive historical datasets, a Time Series Data Compression and Abstraction (TSDCA) algorithm is presented, which can reduce the data scale as well as accurately extracting the characteristics. Based on this, we propose a Multi-layer Time Series Periodic Pattern Recognition (MTSPPR) algorithm using the Fourier Spectrum Analysis (FSA) method. In addition, a Periodicity-based Time Series Prediction (PTSP) algorithm is proposed. Data in the subsequent period are predicted based on all previous period models, in which a time attenuation factor is introduced to control the impact of different periods on the prediction results. Moreover, to improve the performance of the proposed algorithms, we propose a parallel solution on the Apache Spark platform, using the Streaming real-time computing module. To efficiently process the large-scale time-series datasets in distributed computing environments, Distributed Streams (DStreams) and Resilient Distributed Datasets (RDDs) are used to store and calculate these datasets. Extensive experimental results show that our PPTSP algorithm has significant advantages compared with other algorithms in terms of prediction accuracy and performance.

Jianguo Chen, Kenli Li, Huigui Rong et al.

It is crucial to provide compatible treatment schemes for a disease according to various symptoms at different stages. However, most classification methods might be ineffective in accurately classifying a disease that holds the characteristics of multiple treatment stages, various symptoms, and multi-pathogenesis. Moreover, there are limited exchanges and cooperative actions in disease diagnoses and treatments between different departments and hospitals. Thus, when new diseases occur with atypical symptoms, inexperienced doctors might have difficulty in identifying them promptly and accurately. Therefore, to maximize the utilization of the advanced medical technology of developed hospitals and the rich medical knowledge of experienced doctors, a Disease Diagnosis and Treatment Recommendation System (DDTRS) is proposed in this paper. First, to effectively identify disease symptoms more accurately, a Density-Peaked Clustering Analysis (DPCA) algorithm is introduced for disease-symptom clustering. In addition, association analyses on Disease-Diagnosis (D-D) rules and Disease-Treatment (D-T) rules are conducted by the Apriori algorithm separately. The appropriate diagnosis and treatment schemes are recommended for patients and inexperienced doctors, even if they are in a limited therapeutic environment. Moreover, to reach the goals of high performance and low latency response, we implement a parallel solution for DDTRS using the Apache Spark cloud platform. Extensive experimental results demonstrate that the proposed DDTRS realizes disease-symptom clustering effectively and derives disease treatment recommendations intelligently and accurately.

Jianguo Chen, Kenli Li, Kashif Bilal et al.

Benefitting from large-scale training datasets and the complex training network, Convolutional Neural Networks (CNNs) are widely applied in various fields with high accuracy. However, the training process of CNNs is very time-consuming, where large amounts of training samples and iterative operations are required to obtain high-quality weight parameters. In this paper, we focus on the time-consuming training process of large-scale CNNs and propose a Bi-layered Parallel Training (BPT-CNN) architecture in distributed computing environments. BPT-CNN consists of two main components: (a) an outer-layer parallel training for multiple CNN subnetworks on separate data subsets, and (b) an inner-layer parallel training for each subnetwork. In the outer-layer parallelism, we address critical issues of distributed and parallel computing, including data communication, synchronization, and workload balance. A heterogeneous-aware Incremental Data Partitioning and Allocation (IDPA) strategy is proposed, where large-scale training datasets are partitioned and allocated to the computing nodes in batches according to their computing power. To minimize the synchronization waiting during the global weight update process, an Asynchronous Global Weight Update (AGWU) strategy is proposed. In the inner-layer parallelism, we further accelerate the training process for each CNN subnetwork on each computer, where computation steps of convolutional layer and the local weight training are parallelized based on task-parallelism. We introduce task decomposition and scheduling strategies with the objectives of thread-level load balancing and minimum waiting time for critical paths. Extensive experimental results indicate that the proposed BPT-CNN effectively improves the training performance of CNNs while maintaining the accuracy.