IVMar 30, 2023
Anatomically aware dual-hop learning for pulmonary embolism detection in CT pulmonary angiogramsFlorin Condrea, Saikiran Rapaka, Lucian Itu et al.
Pulmonary Embolisms (PE) represent a leading cause of cardiovascular death. While medical imaging, through computed tomographic pulmonary angiography (CTPA), represents the gold standard for PE diagnosis, it is still susceptible to misdiagnosis or significant diagnosis delays, which may be fatal for critical cases. Despite the recently demonstrated power of deep learning to bring a significant boost in performance in a wide range of medical imaging tasks, there are still very few published researches on automatic pulmonary embolism detection. Herein we introduce a deep learning based approach, which efficiently combines computer vision and deep neural networks for pulmonary embolism detection in CTPA. Our method features novel improvements along three orthogonal axes: 1) automatic detection of anatomical structures; 2) anatomical aware pretraining, and 3) a dual-hop deep neural net for PE detection. We obtain state-of-the-art results on the publicly available multicenter large-scale RSNA dataset.
IVDec 10, 2024
Iterative Explainability for Weakly Supervised Segmentation in Medical PE DetectionFlorin Condrea, Saikiran Rapaka, Marius Leordeanu
Pulmonary Embolism (PE) are a leading cause of cardiovascular death. Computed tomographic pulmonary angiography (CTPA) is the gold standard for PE diagnosis, with growing interest in AI-based diagnostic assistance. However, these algorithms are limited by scarce fine-grained annotations of thromboembolic burden. We address this challenge with iExplain, a weakly supervised learning algorithm that transforms coarse image-level annotations into detailed pixel-level PE masks through iterative model explainability. Our approach generates soft segmentation maps used to mask detected regions, enabling the process to repeat and discover additional embolisms that would be missed in a single pass. This iterative refinement effectively captures complete PE regions and detects multiple distinct embolisms. Models trained on these automatically generated annotations achieve excellent PE detection performance, with significant improvements at each iteration. We demonstrate iExplain's effectiveness on the RSPECT augmented dataset, achieving results comparable to strongly supervised methods while outperforming existing weakly supervised methods.