Hao Liu

Yiliang Zhou, Abigail M. Newbury, Gongbo Zhang et al.

The fundamental process of evidence extraction and synthesis in evidence-based medicine involves extracting PICO (Population, Intervention, Comparison, and Outcome) elements from biomedical literature. However, Outcomes, being the most complex elements, are often neglected or oversimplified in existing benchmarks. To address this issue, we present EvidenceOutcomes, a novel, large, annotated corpus of clinically meaningful outcomes extracted from biomedical literature. We first developed a robust annotation guideline for extracting clinically meaningful outcomes from text through iteration and discussion with clinicians and Natural Language Processing experts. Then, three independent annotators annotated the Results and Conclusions sections of a randomly selected sample of 500 PubMed abstracts and 140 PubMed abstracts from the existing EBM-NLP corpus. This resulted in EvidenceOutcomes with high-quality annotations of an inter-rater agreement of 0.76. Additionally, our fine-tuned PubMedBERT model, applied to these 500 PubMed abstracts, achieved an F1-score of 0.69 at the entity level and 0.76 at the token level on the subset of 140 PubMed abstracts from the EBM-NLP corpus. EvidenceOutcomes can serve as a shared benchmark to develop and test future machine learning algorithms to extract clinically meaningful outcomes from biomedical abstracts.

Anqi Liu, Hao Liu, Anima Anandkumar et al.

We propose a robust regression approach to off-policy evaluation (OPE) for contextual bandits. We frame OPE as a covariate-shift problem and leverage modern robust regression tools. Ours is a general approach that can be used to augment any existing OPE method that utilizes the direct method. When augmenting doubly robust methods, we call the resulting method Triply Robust. We prove upper bounds on the resulting bias and variance, as well as derive novel minimax bounds based on robust minimax analysis for covariate shift. Our robust regression method is compatible with deep learning, and is thus applicable to complex OPE settings that require powerful function approximators. Finally, we demonstrate superior empirical performance across the standard OPE benchmarks, especially in the case where the logging policy is unknown and must be estimated from data.