Imran Razzak

Tong Xie, Yuwei Wan, Wei Huang et al.

Emerging tools bring forth fresh approaches to work, and the field of natural science is no different. In natural science, traditional manual, serial, and labour-intensive work is being augmented by automated, parallel, and iterative processes driven by artificial intelligence-based experimental automation and more. To add new capabilities in natural science, enabling the acceleration and enrichment of automation of the discovery process, we present DARWIN, a series of tailored LLMs for natural science, mainly in physics, chemistry, and material science. This series relies on open-source LLM, incorporating structured and unstructured scientific knowledge from public datasets and literature. We fine-tuned the models using over 60,000 instruction data points, emphasizing factual correctness. During the fine-tuning, we introduce the Scientific Instruction Generation (SIG) model, automating instruction generation from scientific texts. This eliminates the need for manual extraction or domain-specific knowledge graphs and efficiently injects scientific knowledge into the model. We also explore multi-task training strategies, revealing interconnections between scientific tasks. DARWIN series not only achieves state-of-the-art results on various scientific tasks but also diminishes reliance on closed-source AI models. Our research showcases the ability of LLM in the scientific domain, with the overarching goal of fostering prosperity within the broader AI for science community.

Farhan Ahmad Jafri, Mohammad Aman Siddiqui, Surendrabikram Thapa et al.

The detection of hate speech in political discourse is a critical issue, and this becomes even more challenging in low-resource languages. To address this issue, we introduce a new dataset named IEHate, which contains 11,457 manually annotated Hindi tweets related to the Indian Assembly Election Campaign from November 1, 2021, to March 9, 2022. We performed a detailed analysis of the dataset, focusing on the prevalence of hate speech in political communication and the different forms of hateful language used. Additionally, we benchmark the dataset using a range of machine learning, deep learning, and transformer-based algorithms. Our experiments reveal that the performance of these models can be further improved, highlighting the need for more advanced techniques for hate speech detection in low-resource languages. In particular, the relatively higher score of human evaluation over algorithms emphasizes the importance of utilizing both human and automated approaches for effective hate speech moderation. Our IEHate dataset can serve as a valuable resource for researchers and practitioners working on developing and evaluating hate speech detection techniques in low-resource languages. Overall, our work underscores the importance of addressing the challenges of identifying and mitigating hate speech in political discourse, particularly in the context of low-resource languages. The dataset and resources for this work are made available at https://github.com/Farhan-jafri/Indian-Election.

Tariq M. Khan, Syed Saud Naqvi, Thantrira Porntaveetus et al.

Medical image segmentation is often framed as a search for stronger architectures, but this can obscure a more fundamental question: what does the dataset require from the model? In medical imaging, this requirement is shaped by foreground occupancy, morphology, boundary ambiguity, topology sensitivity, annotation quality, acquisition variation, and operating point. This paper introduces the Medical Segmentation Dataset Knowledge Card (MS-DKC), a framework for making these factors explicit. MS-DKC records dataset evidence through image/acquisition, morphology, supervision, context-dependence, and deployment-risk descriptors. These descriptors are mapped to failure modes, design priors, and risk-aligned criteria, making segmentation design more traceable than architecture-first comparison. We evaluate MS-DKC on DRIVE, ISIC2018, and ACDC, representing distinct regimes. DRIVE contains sparse, thin, branching vessels, favoring detail-preserving models, sensitivity-aware optimization, threshold analysis, and topology-aware metrics. DKC-TNet-v2 achieved Dice 0.8044 and IoU 0.6730 with 35103 parameters, while SA-UNetv2-DKC-AmbRef reached Dice 0.8141, IoU 0.6865, sensitivity 0.8265, specificity 0.9804, and AUC 0.9853. ISIC2018 involves compact but appearance-variable lesions; validation-constrained score-function selection on Att-Next-Topo/ATTNext produced MS-DKC-AttNextTopo-VCSF-NoAug with Dice 0.8872, IoU 0.8214, precision 0.9173, Boundary F1 0.4878, and ASSD 4.13, while plausible additions failed to improve the risk-aligned profile. ACDC provides a multi-class cardiac case, where MS-DKC recommends four-class softmax segmentation, class-balanced Dice/CE supervision, and class-wise surface evaluation. Overall, the results support dataset-conditioned design: different datasets require different priors, operating points, and evidence before a model can be judged appropriate.

Coen de Vente, Koenraad A. Vermeer, Nicolas Jaccard et al.

The early detection of glaucoma is essential in preventing visual impairment. Artificial intelligence (AI) can be used to analyze color fundus photographs (CFPs) in a cost-effective manner, making glaucoma screening more accessible. While AI models for glaucoma screening from CFPs have shown promising results in laboratory settings, their performance decreases significantly in real-world scenarios due to the presence of out-of-distribution and low-quality images. To address this issue, we propose the Artificial Intelligence for Robust Glaucoma Screening (AIROGS) challenge. This challenge includes a large dataset of around 113,000 images from about 60,000 patients and 500 different screening centers, and encourages the development of algorithms that are robust to ungradable and unexpected input data. We evaluated solutions from 14 teams in this paper, and found that the best teams performed similarly to a set of 20 expert ophthalmologists and optometrists. The highest-scoring team achieved an area under the receiver operating characteristic curve of 0.99 (95% CI: 0.98-0.99) for detecting ungradable images on-the-fly. Additionally, many of the algorithms showed robust performance when tested on three other publicly available datasets. These results demonstrate the feasibility of robust AI-enabled glaucoma screening.

Muhammad Usman, Azka Rehman, Abd Ur Rehman et al. · stanford

Accurate lung nodule segmentation is crucial for early-stage lung cancer diagnosis, as it can substantially enhance patient survival rates. Computed tomography (CT) images are widely employed for early diagnosis in lung nodule analysis. However, the heterogeneity of lung nodules, size diversity, and the complexity of the surrounding environment pose challenges for developing robust nodule segmentation methods. In this study, we propose an efficient end-to-end framework, the multi-encoder-based self-adaptive hard attention network (MESAHA-Net), for precise lung nodule segmentation in CT scans. MESAHA-Net comprises three encoding paths, an attention block, and a decoder block, facilitating the integration of three types of inputs: CT slice patches, forward and backward maximum intensity projection (MIP) images, and region of interest (ROI) masks encompassing the nodule. By employing a novel adaptive hard attention mechanism, MESAHA-Net iteratively performs slice-by-slice 2D segmentation of lung nodules, focusing on the nodule region in each slice to generate 3D volumetric segmentation of lung nodules. The proposed framework has been comprehensively evaluated on the LIDC-IDRI dataset, the largest publicly available dataset for lung nodule segmentation. The results demonstrate that our approach is highly robust for various lung nodule types, outperforming previous state-of-the-art techniques in terms of segmentation accuracy and computational complexity, rendering it suitable for real-time clinical implementation.

Tariq M. Khan, Syed S. Naqvi, Antonio Robles-Kelly et al.

Timely and affordable computer-aided diagnosis of retinal diseases is pivotal in precluding blindness. Accurate retinal vessel segmentation plays an important role in disease progression and diagnosis of such vision-threatening diseases. To this end, we propose a Multi-resolution Contextual Network (MRC-Net) that addresses these issues by extracting multi-scale features to learn contextual dependencies between semantically different features and using bi-directional recurrent learning to model former-latter and latter-former dependencies. Another key idea is training in adversarial settings for foreground segmentation improvement through optimization of the region-based scores. This novel strategy boosts the performance of the segmentation network in terms of the Dice score (and correspondingly Jaccard index) while keeping the number of trainable parameters comparatively low. We have evaluated our method on three benchmark datasets, including DRIVE, STARE, and CHASE, demonstrating its superior performance as compared with competitive approaches elsewhere in the literature.

Luuk H. Boulogne, Julian Lorenz, Daniel Kienzle et al.

Challenges drive the state-of-the-art of automated medical image analysis. The quantity of public training data that they provide can limit the performance of their solutions. Public access to the training methodology for these solutions remains absent. This study implements the Type Three (T3) challenge format, which allows for training solutions on private data and guarantees reusable training methodologies. With T3, challenge organizers train a codebase provided by the participants on sequestered training data. T3 was implemented in the STOIC2021 challenge, with the goal of predicting from a computed tomography (CT) scan whether subjects had a severe COVID-19 infection, defined as intubation or death within one month. STOIC2021 consisted of a Qualification phase, where participants developed challenge solutions using 2000 publicly available CT scans, and a Final phase, where participants submitted their training methodologies with which solutions were trained on CT scans of 9724 subjects. The organizers successfully trained six of the eight Final phase submissions. The submitted codebases for training and running inference were released publicly. The winning solution obtained an area under the receiver operating characteristic curve for discerning between severe and non-severe COVID-19 of 0.815. The Final phase solutions of all finalists improved upon their Qualification phase solutions.HSUXJM-TNZF9CHSUXJM-TNZF9C

Zhixiang Lu, Chong Zhang, Yulong Li et al.

The vision of an inclusive World Wide Web is impeded by a severe linguistic divide, particularly for communities in low-resource regions of Southeast Asia. While large language models (LLMs) offer a potential solution for translation, their deployment in data-poor contexts faces a dual challenge: the scarcity of high-quality, culturally relevant data and the prohibitive energy costs of training on massive, noisy web corpora. To resolve the tension between digital inclusion and environmental sustainability, we introduce Sustainable Agent-Guided Expert-tuning (SAGE). This framework pioneers an energy-aware paradigm that prioritizes the "right data" over "big data". Instead of carbon-intensive training on unfiltered datasets, SAGE employs a reinforcement learning (RL) agent, optimized via Group Relative Policy Optimization (GRPO), to autonomously curate a compact training set. The agent utilizes a semantic reward signal derived from a small, expert-constructed set of community dialogues to filter out noise and cultural misalignment. We then efficiently fine-tune open-source LLMs on this curated data using Low-Rank Adaptation (LoRA). We applied SAGE to translation tasks between English and seven low-resource languages (LRLs) in Southeast Asia. Our approach establishes new state-of-the-art performance on BLEU-4 and COMET-22 metrics, effectively capturing local linguistic nuances. Crucially, SAGE surpasses baselines trained on full datasets while reducing data usage by 97.1% and training energy consumption by 95.2%. By delivering high-performance models with a minimal environmental footprint, SAGE offers a scalable and responsible pathway to bridge the digital divide in the Global South.

Pervaiz Iqbal Khan, Imran Razzak, Andreas Dengel et al.

Health mention classification deals with the disease detection in a given text containing disease words. However, non-health and figurative use of disease words adds challenges to the task. Recently, adversarial training acting as a means of regularization has gained popularity in many NLP tasks. In this paper, we propose a novel approach to train language models for health mention classification of tweets that involves adversarial training. We generate adversarial examples by adding perturbation to the representations of transformer models for tweet examples at various levels using Gaussian noise. Further, we employ contrastive loss as an additional objective function. We evaluate the proposed method on the PHM2017 dataset extended version. Results show that our proposed approach improves the performance of classifier significantly over the baseline methods. Moreover, our analysis shows that adding noise at earlier layers improves models' performance whereas adding noise at intermediate layers deteriorates models' performance. Finally, adding noise towards the final layers performs better than the middle layers noise addition.

Tariq M. Khan, Muhammad Arsalan, Shahzaib Iqbal et al.

Diseases such as diabetic retinopathy and age-related macular degeneration pose a significant risk to vision, highlighting the importance of precise segmentation of retinal vessels for the tracking and diagnosis of progression. However, existing vessel segmentation methods that heavily rely on encoder-decoder structures struggle to capture contextual information about retinal vessel configurations, leading to challenges in reconciling semantic disparities between encoder and decoder features. To address this, we propose a novel feature enhancement segmentation network (FES-Net) that achieves accurate pixel-wise segmentation without requiring additional image enhancement steps. FES-Net directly processes the input image and utilizes four prompt convolutional blocks (PCBs) during downsampling, complemented by a shallow upsampling approach to generate a binary mask for each class. We evaluate the performance of FES-Net on four publicly available state-of-the-art datasets: DRIVE, STARE, CHASE, and HRF. The evaluation results clearly demonstrate the superior performance of FES-Net compared to other competitive approaches documented in the existing literature.

Adrito Das, Danyal Z. Khan, Dimitrios Psychogyios et al.

The field of computer vision applied to videos of minimally invasive surgery is ever-growing. Workflow recognition pertains to the automated recognition of various aspects of a surgery: including which surgical steps are performed; and which surgical instruments are used. This information can later be used to assist clinicians when learning the surgery; during live surgery; and when writing operation notes. The Pituitary Vision (PitVis) 2023 Challenge tasks the community to step and instrument recognition in videos of endoscopic pituitary surgery. This is a unique task when compared to other minimally invasive surgeries due to the smaller working space, which limits and distorts vision; and higher frequency of instrument and step switching, which requires more precise model predictions. Participants were provided with 25-videos, with results presented at the MICCAI-2023 conference as part of the Endoscopic Vision 2023 Challenge in Vancouver, Canada, on 08-Oct-2023. There were 18-submissions from 9-teams across 6-countries, using a variety of deep learning models. A commonality between the top performing models was incorporating spatio-temporal and multi-task methods, with greater than 50% and 10% macro-F1-score improvement over purely spacial single-task models in step and instrument recognition respectively. The PitVis-2023 Challenge therefore demonstrates state-of-the-art computer vision models in minimally invasive surgery are transferable to a new dataset, with surgery specific techniques used to enhance performance, progressing the field further. Benchmark results are provided in the paper, and the dataset is publicly available at: https://doi.org/10.5522/04/26531686.

Pervaiz Iqbal Khan, Shoaib Ahmed Siddiqui, Imran Razzak et al.

Health mentioning classification (HMC) classifies an input text as health mention or not. Figurative and non-health mention of disease words makes the classification task challenging. Learning the context of the input text is the key to this problem. The idea is to learn word representation by its surrounding words and utilize emojis in the text to help improve the classification results. In this paper, we improve the word representation of the input text using adversarial training that acts as a regularizer during fine-tuning of the model. We generate adversarial examples by perturbing the embeddings of the model and then train the model on a pair of clean and adversarial examples. Additionally, we utilize contrastive loss that pushes a pair of clean and perturbed examples close to each other and other examples away in the representation space. We train and evaluate the method on an extended version of the publicly available PHM2017 dataset. Experiments show an improvement of 1.0% over BERT-Large baseline and 0.6% over RoBERTa-Large baseline, whereas 5.8% over the state-of-the-art in terms of F1 score. Furthermore, we provide a brief analysis of the results by utilizing the power of explainable AI.

Christopher De Baets, Basem Suleiman, Armin Chitizadeh et al.

In the growing field of blockchain technology, smart contracts exist as transformative digital agreements that execute transactions autonomously in decentralised networks. However, these contracts face challenges in the form of security vulnerabilities, posing significant financial and operational risks. While traditional methods to detect and mitigate vulnerabilities in smart contracts are limited due to a lack of comprehensiveness and effectiveness, integrating advanced machine learning technologies presents an attractive approach to increasing effective vulnerability countermeasures. We endeavour to fill an important gap in the existing literature by conducting a rigorous systematic review, exploring the intersection between machine learning and smart contracts. Specifically, the study examines the potential of machine learning techniques to improve the detection and mitigation of vulnerabilities in smart contracts. We analysed 88 articles published between 2018 and 2023 from the following databases: IEEE, ACM, ScienceDirect, Scopus, and Google Scholar. The findings reveal that classical machine learning techniques, including KNN, RF, DT, XG-Boost, and SVM, outperform static tools in vulnerability detection. Moreover, multi-model approaches integrating deep learning and classical machine learning show significant improvements in precision and recall, while hybrid models employing various techniques achieve near-perfect performance in vulnerability detection accuracy. By integrating state-of-the-art solutions, this work synthesises current methods, thoroughly investigates research gaps, and suggests directions for future studies. The insights gathered from this study are intended to serve as a seminal reference for academics, industry experts, and bodies interested in leveraging machine learning to enhance smart contract security.

Md. Arid Hasan, Prerona Tarannum, Krishno Dey et al.

Large language models (LLMs) have garnered significant interest in natural language processing (NLP), particularly their remarkable performance in various downstream tasks in resource-rich languages. Recent studies have highlighted the limitations of LLMs in low-resource languages, primarily focusing on binary classification tasks and giving minimal attention to South Asian languages. These limitations are primarily attributed to constraints such as dataset scarcity, computational costs, and research gaps specific to low-resource languages. To address this gap, we present datasets for sentiment and hate speech tasks by translating from English to Bangla, Hindi, and Urdu, facilitating research in low-resource language processing. Further, we comprehensively examine zero-shot learning using multiple LLMs in English and widely spoken South Asian languages. Our findings indicate that GPT-4 consistently outperforms Llama 2 and Gemini, with English consistently demonstrating superior performance across diverse tasks compared to low-resource languages. Furthermore, our analysis reveals that natural language inference (NLI) exhibits the highest performance among the evaluated tasks, with GPT-4 demonstrating superior capabilities.

Shahzaib Iqbal, Muhammad Zeeshan, Mehwish Mehmood et al.

Early detection of skin cancer relies on precise segmentation of dermoscopic images of skin lesions. However, this task is challenging due to the irregular shape of the lesion, the lack of sharp borders, and the presence of artefacts such as marker colours and hair follicles. Recent methods for melanoma segmentation are U-Nets and fully connected networks (FCNs). As the depth of these neural network models increases, they can face issues like the vanishing gradient problem and parameter redundancy, potentially leading to a decrease in the Jaccard index of the segmentation model. In this study, we introduced a novel network named TESL-Net for the segmentation of skin lesions. The proposed TESL-Net involves a hybrid network that combines the local features of a CNN encoder-decoder architecture with long-range and temporal dependencies using bi-convolutional long-short-term memory (Bi-ConvLSTM) networks and a Swin transformer. This enables the model to account for the uncertainty of segmentation over time and capture contextual channel relationships in the data. We evaluated the efficacy of TESL-Net in three commonly used datasets (ISIC 2016, ISIC 2017, and ISIC 2018) for the segmentation of skin lesions. The proposed TESL-Net achieves state-of-the-art performance, as evidenced by a significantly elevated Jaccard index demonstrated by empirical results.

Hamza Farooq, Zuhair Zafar, Ahsan Saadat et al.

Accurate segmentation of skin lesions within dermoscopic images plays a crucial role in the timely identification of skin cancer for computer-aided diagnosis on mobile platforms. However, varying shapes of the lesions, lack of defined edges, and the presence of obstructions such as hair strands and marker colors make this challenge more complex. \textcolor{red}Additionally, skin lesions often exhibit subtle variations in texture and color that are difficult to differentiate from surrounding healthy skin, necessitating models that can capture both fine-grained details and broader contextual information. Currently, melanoma segmentation models are commonly based on fully connected networks and U-Nets. However, these models often struggle with capturing the complex and varied characteristics of skin lesions, such as the presence of indistinct boundaries and diverse lesion appearances, which can lead to suboptimal segmentation performance.To address these challenges, we propose a novel lightweight network specifically designed for skin lesion segmentation utilizing mobile devices, featuring a minimal number of learnable parameters (only 0.8 million). This network comprises an encoder-decoder architecture that incorporates conformer-based focal modulation attention, self-aware local and global spatial attention, and split channel-shuffle. The efficacy of our model has been evaluated on four well-established benchmark datasets for skin lesion segmentation: ISIC 2016, ISIC 2017, ISIC 2018, and PH2. Empirical findings substantiate its state-of-the-art performance, notably reflected in a high Jaccard index.

Tariq M Khan, Shahzaib Iqbal, Syed S. Naqvi et al.

Retinal diseases can cause irreversible vision loss in both eyes if not diagnosed and treated early. Since retinal diseases are so complicated, retinal imaging is likely to show two or more abnormalities. Current deep learning techniques for segmenting retinal images with many labels and attributes have poor detection accuracy and generalisability. This paper presents a multipath convolutional neural network for multifeature segmentation. The proposed network is lightweight and spatially sensitive to information. A patch-based implementation is used to extract local image features, and focal modulation attention blocks are incorporated between the encoder and the decoder for improved segmentation. Filter optimisation is used to prevent filter overlaps and speed up model convergence. A combination of convolution operations and group convolution operations is used to reduce computational costs. This is the first robust and generalisable network capable of segmenting multiple features of fundus images (including retinal vessels, microaneurysms, optic discs, haemorrhages, hard exudates, and soft exudates). The results of our experimental evaluation on more than ten publicly available datasets with multiple features show that the proposed network outperforms recent networks despite having a small number of learnable parameters.

Abdul Wahab, Tariq Mahmood Khan, Shahzaib Iqbal et al.

Identification of suspects based on partial and smudged fingerprints, commonly referred to as fingermarks or latent fingerprints, presents a significant challenge in the field of fingerprint recognition. Although fixed-length embeddings have shown effectiveness in recognising rolled and slap fingerprints, the methods for matching latent fingerprints have primarily centred around local minutiae-based embeddings, failing to fully exploit global representations for matching purposes. Consequently, enhancing latent fingerprints becomes critical to ensuring robust identification for forensic investigations. Current approaches often prioritise restoring ridge patterns, overlooking the fine-macroeconomic details crucial for accurate fingerprint recognition. To address this, we propose a novel approach that uses generative adversary networks (GANs) to redefine Latent Fingerprint Enhancement (LFE) through a structured approach to fingerprint generation. By directly optimising the minutiae information during the generation process, the model produces enhanced latent fingerprints that exhibit exceptional fidelity to ground-truth instances. This leads to a significant improvement in identification performance. Our framework integrates minutiae locations and orientation fields, ensuring the preservation of both local and structural fingerprint features. Extensive evaluations conducted on two publicly available datasets demonstrate our method's dominance over existing state-of-the-art techniques, highlighting its potential to significantly enhance latent fingerprint recognition accuracy in forensic applications.

Syed Javed, Tariq M. Khan, Abdul Qayyum et al.

Retinal imaging has emerged as a promising method of addressing this challenge, taking advantage of the unique structure of the retina. The retina is an embryonic extension of the central nervous system, providing a direct in vivo window into neurological health. Recent studies have shown that specific structural changes in retinal vessels can not only serve as early indicators of various diseases but also help to understand disease progression. In this work, we present a lightweight retinal vessel segmentation network based on the encoder-decoder mechanism with region-guided attention. We introduce inverse addition attention blocks with region guided attention to focus on the foreground regions and improve the segmentation of regions of interest. To further boost the model's performance on retinal vessel segmentation, we employ a weighted dice loss. This choice is particularly effective in addressing the class imbalance issues frequently encountered in retinal vessel segmentation tasks. Dice loss penalises false positives and false negatives equally, encouraging the model to generate more accurate segmentation with improved object boundary delineation and reduced fragmentation. Extensive experiments on a benchmark dataset show better performance (0.8285, 0.8098, 0.9677, and 0.8166 recall, precision, accuracy and F1 score respectively) compared to state-of-the-art methods.

Shahzaib Iqbal, Hasnat Ahmed, Muhammad Sharif et al.

Segmenting ultrasound images is critical for various medical applications, but it offers significant challenges due to ultrasound images' inherent noise and unpredictability. To address these challenges, we proposed EUIS-Net, a CNN network designed to segment ultrasound images efficiently and precisely. The proposed EUIS-Net utilises four encoder-decoder blocks, resulting in a notable decrease in computational complexity while achieving excellent performance. The proposed EUIS-Net integrates both channel and spatial attention mechanisms into the bottleneck to improve feature representation and collect significant contextual information. In addition, EUIS-Net incorporates a region-aware attention module in skip connections, which enhances the ability to concentrate on the region of the injury. To enable thorough information exchange across various network blocks, skip connection aggregation is employed from the network's lowermost to the uppermost block. Comprehensive evaluations are conducted on two publicly available ultrasound image segmentation datasets. The proposed EUIS-Net achieved mean IoU and dice scores of 78. 12\%, 85. 42\% and 84. 73\%, 89. 01\% in the BUSI and DDTI datasets, respectively. The findings of our study showcase the substantial capabilities of EUIS-Net for immediate use in clinical settings and its versatility in various ultrasound imaging tasks.

Mahrukh Siddiqui, Shahzaib Iqbal, Bandar AlShammari et al.

Compared to contact fingerprint images, contactless fingerprint images exhibit four distinct characteristics: (1) they contain less noise; (2) they have fewer discontinuities in ridge patterns; (3) the ridge-valley pattern is less distinct; and (4) they pose an interoperability problem, as they lack the elastic deformation caused by pressing the finger against the capture device. These properties present significant challenges for the enhancement of contactless fingerprint images. In this study, we propose a novel contactless fingerprint identification solution that enhances the accuracy of minutiae detection through improved frequency estimation and a new region-quality-based minutia extraction algorithm. In addition, we introduce an efficient and highly accurate minutiae-based encoding and matching algorithm. We validate the effectiveness of our approach through extensive experimental testing. Our method achieves a minimum Equal Error Rate (EER) of 2.84\% on the PolyU contactless fingerprint dataset, demonstrating its superior performance compared to existing state-of-the-art techniques. The proposed fingerprint identification method exhibits notable precision and resilience, proving to be an effective and feasible solution for contactless fingerprint-based identification systems.

Feilong Tang, Matt Trinh, Annita Duong et al.

Migraine, a prevalent neurological disorder, has been associated with various ocular manifestations suggestive of neuronal and microvascular deficits. However, there is limited understanding of the extent to which retinal imaging may discriminate between individuals with migraines versus without migraines. In this study, we apply convolutional neural networks to color fundus photography (CFP) and optical coherence tomography (OCT) data to investigate differences in the retina that may not be apparent through traditional human-based interpretations of retinal imaging. Retrospective data of CFP type 1 [posterior pole] and type 2 [optic nerve head (ONH)] from 369 and 336 participants respectively were analyzed. All participants had bilaterally normal optic nerves and maculae, with no retinal-involving diseases. CFP images were concatenated with OCT default ONH measurements, then inputted through three convolutional neural networks - VGG-16, ResNet-50, and Inceptionv3. The primary outcome was performance of discriminating between with migraines versus without migraines, using retinal microvascular and neuronal imaging characteristics. Using CFP type 1 data, discrimination (AUC [95% CI]) was high (0.84 [0.8, 0.88] to 0.87 [0.84, 0.91]) and not significantly different between VGG-16, ResNet-50, and Inceptionv3. Using CFP type 2 [ONH] data, discrimination was reduced and ranged from poor to fair (0.69 [0.62, 0.77] to 0.74 [0.67, 0.81]). OCT default ONH measurements overall did not significantly contribute to model performance. Class activation maps (CAMs) highlighted that the paravascular arcades were regions of interest. The findings suggest that individuals with migraines demonstrate microvascular differences more so than neuronal differences in comparison to individuals without migraines.

Shahzaib Iqbal, Tariq M. Khan, Syed S. Naqvi et al.

In this study, we propose LDMRes-Net, a lightweight dual-multiscale residual block-based computational neural network tailored for medical image segmentation on IoT and edge platforms. Conventional U-Net-based models face challenges in meeting the speed and efficiency demands of real-time clinical applications, such as disease monitoring, radiation therapy, and image-guided surgery. LDMRes-Net overcomes these limitations with its remarkably low number of learnable parameters (0.072M), making it highly suitable for resource-constrained devices. The model's key innovation lies in its dual multi-residual block architecture, which enables the extraction of refined features on multiple scales, enhancing overall segmentation performance. To further optimize efficiency, the number of filters is carefully selected to prevent overlap, reduce training time, and improve computational efficiency. The study includes comprehensive evaluations, focusing on segmentation of the retinal image of vessels and hard exudates crucial for the diagnosis and treatment of ophthalmology. The results demonstrate the robustness, generalizability, and high segmentation accuracy of LDMRes-Net, positioning it as an efficient tool for accurate and rapid medical image segmentation in diverse clinical applications, particularly on IoT and edge platforms. Such advances hold significant promise for improving healthcare outcomes and enabling real-time medical image analysis in resource-limited settings.

Marawan Elbatel, Mohamed Ghonim, Jiaji Mao et al.

Automated segmentation of liver lesions on non-contrast computed tomography (NCCT) is clinically important but fundamentally challenging, particularly in low-resource settings across Africa and Asia where contrast agents are frequently unavailable. Progress has been limited by the absence of annotated NCCT benchmarks. Here we describe the TriALS challenge for automated liver lesion segmentation under contrast-limited conditions, supported by a multi-centre dataset of 150 cases with four-phase CT acquisitions (600 volumes) from Egyptian and Chinese institutions. Algorithms were evaluated on 70 cases from three institutions, including an independent external cohort. The top-performing method achieved a mean venous-phase Dice of 0.754, consistent with human-level performance, yet dropped to 0.57 on NCCT. On external validation, the leading method outperformed off-the-shelf models by up to 28% in Dice on NCCT. Algorithm performance was most strongly predicted by training data scale and pre-training strategy. A cross-year comparison exposed a persistent perceptual barrier on NCCT that scaling pre-training alone cannot overcome. Data, annotations, and code are available at https://github.com/xmed-lab/TriALS.

Asim Naveed, Syed S. Naqvi, Tariq M. Khan et al.

Skin cancer holds the highest incidence rate among all cancers globally. The importance of early detection cannot be overstated, as late-stage cases can be lethal. Classifying skin lesions, however, presents several challenges due to the many variations they can exhibit, such as differences in colour, shape, and size, significant variation within the same class, and notable similarities between different classes. This paper introduces a novel class-wise attention technique that equally regards each class while unearthing more specific details about skin lesions. This attention mechanism is progressively used to amalgamate discriminative feature details from multiple scales. The introduced technique demonstrated impressive performance, surpassing more than 15 cutting-edge methods including the winners of HAM1000 and ISIC 2019 leaderboards. It achieved an impressive accuracy rate of 97.40% on the HAM10000 dataset and 94.9% on the ISIC 2019 dataset.

Ankan Deria, Komal Kumar, Adinath Madhavrao Dukre et al.

Multimodal large language models (MLLMs) have rapidly advanced, yet their adoption in medicine remains limited by gaps in domain coverage, modality alignment, and grounded reasoning. In this work, we introduce MedMO, a medical foundation model built upon a generalized MLLM architecture and trained exclusively on large-scale, domain-specific data. MedMO follows a multi-stage training recipe: (i) cross-modal pretraining to align heterogeneous visual encoders with a medical language backbone; (ii) instruction tuning on multi-task supervision that spans captioning, VQA, report generation, retrieval, and grounded disease localization with bounding boxes; and (iii) reinforcement learning with verifiable rewards that combine factuality checks with a box-level GIoU reward to strengthen spatial grounding and step-by-step reasoning in complex clinical scenarios. MedMO consistently outperforms strong open-source medical MLLMs across multiple modalities and tasks. On VQA benchmarks, MedMO achieves an average accuracy improvement of +13.7% over the baseline and performs within 1.9% of the SOTA Fleming-VL. For text-based QA, it attains +6.9% over the baseline and +14.5% over Fleming-VL. In medical report generation, MedMO delivers significant gains in both semantic and clinical accuracy. Moreover, it exhibits strong grounding capability, achieving an IoU improvement of +40.4 over the baseline and +37.0% over Fleming-VL, underscoring its robust spatial reasoning and localization performance. Evaluations across radiology, ophthalmology, and pathology-microscopy confirm MedMO's broad cross-modality generalization. We release two versions of MedMO: 4B and 8B. Project is available at https://genmilab.github.io/MedMO-Page

Lingzhi Shen, Xiaohao Cai, Yunfei Long et al.

Cultural awareness in language models is the capacity to understand and adapt to diverse cultural contexts. However, most existing approaches treat culture as static background knowledge, overlooking its dynamic and evolving nature. This limitation reduces their reliability in downstream tasks that demand genuine cultural sensitivity. In this work, we introduce CALM, a novel framework designed to endow language models with cultural self-awareness. CALM disentangles task semantics from explicit cultural concepts and latent cultural signals, shaping them into structured cultural clusters through contrastive learning. These clusters are then aligned via cross-attention to establish fine-grained interactions among related cultural features and are adaptively integrated through a Mixture-of-Experts mechanism along culture-specific dimensions. The resulting unified representation is fused with the model's original knowledge to construct a culturally grounded internal identity state, which is further enhanced through self-prompted reflective learning, enabling continual adaptation and self-correction. Extensive experiments conducted on multiple cross-cultural benchmark datasets demonstrate that CALM consistently outperforms state-of-the-art methods.

Zhixiang Lu, Xueyuan Deng, Yiran Liu et al.

Traditional agent-based models (ABMs) of opinion dynamics often fail to capture the psychological heterogeneity driving online polarization due to simplistic homogeneity assumptions. This limitation obscures the critical interplay between individual cognitive biases and information propagation, thereby hindering a mechanistic understanding of how ideological divides are amplified. To address this challenge, we introduce the Personality-Refracted Intelligent Simulation Model (PRISM), a hybrid framework coupling stochastic differential equations (SDE) for continuous emotional evolution with a personality-conditional partially observable Markov decision process (PC-POMDP) for discrete decision-making. In contrast to continuous trait approaches, PRISM assigns distinct Myers-Briggs Type Indicator (MBTI) based cognitive policies to multimodal large language model (MLLM) agents, initialized via data-driven priors from large-scale social media datasets. PRISM achieves superior personality consistency aligned with human ground truth, significantly outperforming standard homogeneous and Big Five benchmarks. This framework effectively replicates emergent phenomena such as rational suppression and affective resonance, offering a robust tool for analyzing complex social media ecosystems.

Felix Divo, Maurice Kraus, Anh Q. Nguyen et al.

Text offers intuitive access to information. This can, in particular, complement the density of numerical time series, thereby allowing improved interactions with time series models to enhance accessibility and decision-making. While the creation of question-answering datasets and models has recently seen remarkable growth, most research focuses on question answering (QA) on vision and text, with time series receiving minute attention. To bridge this gap, we propose a challenging novel time series QA (TSQA) dataset, QuAnTS, for Question Answering on Time Series data. Specifically, we pose a wide variety of questions and answers about human motion in the form of tracked skeleton trajectories. We verify that the large-scale QuAnTS dataset is well-formed and comprehensive through extensive experiments. Thoroughly evaluating existing and newly proposed baselines then lays the groundwork for a deeper exploration of TSQA using QuAnTS. Additionally, we provide human performances as a key reference for gauging the practical usability of such models. We hope to encourage future research on interacting with time series models through text, enabling better decision-making and more transparent systems.

Hamad Zogan, Imran Razzak, Shoaib Jameel et al.

Social media posts provide valuable insight into the narrative of users and their intentions, including providing an opportunity to automatically model whether a social media user is depressed or not. The challenge lies in faithfully modelling user narratives from their online social media posts, which could potentially be useful in several different applications. We have developed a novel and effective model called \texttt{NarrationDep}, which focuses on detecting narratives associated with depression. By analyzing a user's tweets, \texttt{NarrationDep} accurately identifies crucial narratives. \texttt{NarrationDep} is a deep learning framework that jointly models individual user tweet representations and clusters of users' tweets. As a result, \texttt{NarrationDep} is characterized by a novel two-layer deep learning model: the first layer models using social media text posts, and the second layer learns semantic representations of tweets associated with a cluster. To faithfully model these cluster representations, the second layer incorporates a novel component that hierarchically learns from users' posts. The results demonstrate that our framework outperforms other comparative models including recently developed models on a variety of datasets.

Govinda Kolli, Adinath Madhavrao Dukre, Behzad Bozorgtabar et al.

Medical Vision-Language Models (VLMs) often hallucinate by generating responses based on language priors rather than visual evidence, posing risks in clinical applications. We propose Visual Grounding Score Guided Decoding (VGS-Decoding), a training-free method to mitigate hallucinations during inference. Our key insight is that hallucinated tokens maintain or increase their probability when visual information is degraded, while visually grounded tokens decrease in probability. We introduce the Visual Grounding Score (VGS), which measures each token's visual dependency by comparing distributions from original and distorted images. During decoding, we reweight probabilities by amplifying visually grounded tokens while suppressing hallucinations. Unlike fixed-weight contrastive methods, VGS-Decoding provides per-token adaptive control. Experiments on MIMIC-Diff-VQA and VQA-RAD across LLaVA-Med, CheXagent, and MedGemma demonstrate consistent improvements, with up to +9.12% overall gain and $+8.98\%$ in open-ended recall, while introducing only $2\times$ inference overhead and no additional training, making it practical for clinical deployment. Upon acceptance, code will be released publicly to facilitate reproducibility.

Behzad Bozorgtabar, Dwarikanath Mahapatra, Sudipta Roy et al.

Medical vision-language models (VLMs) are strong zero-shot recognizers for medical imaging, but their reliability under domain shift hinges on calibrated uncertainty with guarantees. Split conformal prediction (SCP) offers finite-sample coverage, yet prediction sets often become large (low efficiency) and class-wise coverage unbalanced-high class-conditioned coverage gap (CCV), especially in few-shot, imbalanced regimes; moreover, naively adapting to calibration labels breaks exchangeability and voids guarantees. We propose \texttt{\textbf{LATA}} (Laplacian-Assisted Transductive Adaptation), a \textit{training- and label-free} refinement that operates on the joint calibration and test pool by smoothing zero-shot probabilities over an image-image k-NN graph using a small number of CCCP mean-field updates, preserving SCP validity via a deterministic transform. We further introduce a \textit{failure-aware} conformal score that plugs into the vision-language uncertainty (ViLU) framework, providing instance-level difficulty and label plausibility to improve prediction set efficiency and class-wise balance at fixed coverage. \texttt{\textbf{LATA}} is black-box (no VLM updates), compute-light (windowed transduction, no backprop), and includes an optional prior knob that can run strictly label-free or, if desired, in a label-informed variant using calibration marginals once. Across \textbf{three} medical VLMs and \textbf{nine} downstream tasks, \texttt{\textbf{LATA}} consistently reduces set size and CCV while matching or tightening target coverage, outperforming prior transductive baselines and narrowing the gap to label-using methods, while using far less compute. Comprehensive ablations and qualitative analyses show that \texttt{\textbf{LATA}} sharpens zero-shot predictions without compromising exchangeability.

Tong Wang, Yaolei Qi, Siwen Wang et al.

Video polyp segmentation (VPS) is an important task in computer-aided colonoscopy, as it helps doctors accurately locate and track polyps during examinations. However, VPS remains challenging because polyps often look similar to surrounding mucosa, leading to weak semantic discrimination. In addition, large changes in polyp position and scale across video frames make stable and accurate segmentation difficult. To address these challenges, we propose a robust VPS framework named CMSA-Net. The proposed network introduces a Causal Multi-scale Aggregation (CMA) module to effectively gather semantic information from multiple historical frames at different scales. By using causal attention, CMA ensures that temporal feature propagation follows strict time order, which helps reduce noise and improve feature reliability. Furthermore, we design a Dynamic Multi-source Reference (DMR) strategy that adaptively selects informative and reliable reference frames based on semantic separability and prediction confidence. This strategy provides strong multi-frame guidance while keeping the model efficient for real-time inference. Extensive experiments on the SUN-SEG dataset demonstrate that CMSA-Net achieves state-of-the-art performance, offering a favorable balance between segmentation accuracy and real-time clinical applicability.

Lingzhi Shen, Yunfei Long, Xiaohao Cai et al.

Multimodal fake news detection often involves modelling heterogeneous data sources, such as vision and language. Existing detection methods typically rely on fusion effectiveness and cross-modal consistency to model the content, complicating understanding how each modality affects prediction accuracy. Additionally, these methods are primarily based on static feature modelling, making it difficult to adapt to the dynamic changes and relationships between different data modalities. This paper develops a significantly novel approach, GAMED, for multimodal modelling, which focuses on generating distinctive and discriminative features through modal decoupling to enhance cross-modal synergies, thereby optimizing overall performance in the detection process. GAMED leverages multiple parallel expert networks to refine features and pre-embed semantic knowledge to improve the experts' ability in information selection and viewpoint sharing. Subsequently, the feature distribution of each modality is adaptively adjusted based on the respective experts' opinions. GAMED also introduces a novel classification technique to dynamically manage contributions from different modalities, while improving the explainability of decisions. Experimental results on the Fakeddit and Yang datasets demonstrate that GAMED performs better than recently developed state-of-the-art models. The source code can be accessed at https://github.com/slz0925/GAMED.

Jincen Jiang, Lizhi Zhao, Xuequan Lu et al.

Recent works attempt to extend Graph Convolution Networks (GCNs) to point clouds for classification and segmentation tasks. These works tend to sample and group points to create smaller point sets locally and mainly focus on extracting local features through GCNs, while ignoring the relationship between point sets. In this paper, we propose the Dynamic Hop Graph Convolution Network (DHGCN) for explicitly learning the contextual relationships between the voxelized point parts, which are treated as graph nodes. Motivated by the intuition that the contextual information between point parts lies in the pairwise adjacent relationship, which can be depicted by the hop distance of the graph quantitatively, we devise a novel self-supervised part-level hop distance reconstruction task and design a novel loss function accordingly to facilitate training. In addition, we propose the Hop Graph Attention (HGA), which takes the learned hop distance as input for producing attention weights to allow edge features to contribute distinctively in aggregation. Eventually, the proposed DHGCN is a plug-and-play module that is compatible with point-based backbone networks. Comprehensive experiments on different backbones and tasks demonstrate that our self-supervised method achieves state-of-the-art performance. Our source code is available at: https://github.com/Jinec98/DHGCN.

Xi Zhu, Haochen Xue, Ziwei Zhao et al.

Text-Attributed Graphs (TAGs), where each node is associated with text descriptions, are ubiquitous in real-world scenarios. They typically exhibit distinctive structure and domain-specific knowledge, motivating the development of a Graph Foundation Model (GFM) that generalizes across diverse graphs and tasks. Despite large efforts to integrate Large Language Models (LLMs) and Graph Neural Networks (GNNs) for TAGs, existing approaches suffer from decoupled architectures with two-stage alignment, limiting their synergistic potential. Even worse, existing methods assign out-of-vocabulary (OOV) tokens to graph nodes, leading to graph-specific semantics, token explosion, and incompatibility with task-oriented prompt templates, which hinders cross-graph and cross-task transferability. To address these challenges, we propose PromptGFM, a versatile GFM for TAGs grounded in graph vocabulary learning. PromptGFM comprises two key components: (1) Graph Understanding Module, which explicitly prompts LLMs to replicate the finest GNN workflow within the text space, facilitating seamless GNN-LLM integration and elegant graph-text alignment; (2) Graph Inference Module, which establishes a language-based graph vocabulary ensuring expressiveness, transferability, and scalability, enabling readable instructions for LLM fine-tuning. Extensive experiments demonstrate our superiority and transferability across diverse graphs and tasks. The code is available at this: https://github.com/agiresearch/PromptGFM.

Muhammad Zafar Iqbal, Ghazanfar Farooq Siddiqui, Anwar Ul Haq et al.

Deformable medical image registration is a fundamental task in medical image analysis with applications in disease diagnosis, treatment planning, and image-guided interventions. Despite significant advances in deep learning based registration methods, accurately aligning images with large deformations while preserving anatomical plausibility remains a challenging task. In this paper, we propose a novel Attention-Driven Framework for Non-Rigid Medical Image Registration (AD-RegNet) that employs attention mechanisms to guide the registration process. Our approach combines a 3D UNet backbone with bidirectional cross-attention, which establishes correspondences between moving and fixed images at multiple scales. We introduce a regional adaptive attention mechanism that focuses on anatomically relevant structures, along with a multi-resolution deformation field synthesis approach for accurate alignment. The method is evaluated on two distinct datasets: DIRLab for thoracic 4D CT scans and IXI for brain MRI scans, demonstrating its versatility across different anatomical structures and imaging modalities. Experimental results demonstrate that our approach achieves performance competitive with state-of-the-art methods on the IXI and DIRLab datasets. The proposed method maintains a favorable balance between registration accuracy and computational efficiency, making it suitable for clinical applications. A comprehensive evaluation using normalized cross-correlation (NCC), mean squared error (MSE), structural similarity (SSIM), Jacobian determinant, and target registration error (TRE) indicates that attention-guided registration improves alignment accuracy while ensuring anatomically plausible deformations.

Mohammad Anas Azeez, Ankan Deria, Zohaib Hasan Siddiqui et al.

Multimodal large language models (MLLMs) frequently hallucinate objects that are absent from the visual input, often because attention during decoding is disproportionately drawn to visually dominant or frequently occurring content. We observe that this inequity in attention allocation is a root cause of object hallucination: when rare, small, or contextually peripheral objects receive insufficient attention, the model fails to ground its generation in the full visual scene. We argue that every object in an image, regardless of its size, frequency or visual salience, deserves equal representational opportunity during decoding. To this end, we propose DOP-OBC, a training-free and architecture-agnostic decoding strategy built on the principle of equitable attention. Two complementary object-aware signals work in tandem: a Dominant Object Penalty (DOP) that softly suppresses attention over-concentration on visually dominant regions, and an Outlier Boost Coefficient (OBC) that amplifies attention toward rare yet confidently detected objects. These signals are injected as per-row logit modulations within the causal attention mask, requiring no weight updates and preserving autoregressive decoding properties. Extensive experiments across image and video MLLMs demonstrate consistent reductions in object hallucination on CHAIR and POPE benchmarks, alongside improvements in GPT-4o assessed captioning quality across correctness, consistency, detail, context and temporal dimensions. DOP-OBC establishes that fairness in attention allocation is not merely a design principle but a practical and effective path toward more faithful multimodal generation.

Xinlin Zhuang, Panyi Ouyang, Yichen Li et al.

Muon has recently emerged as a competitive alternative to AdamW for large-scale pre-training, with orthogonalization via Newton-Schulz (NS) iterations as its core operation. Existing Muon variants apply a uniform NS schedule to all parameter matrices, overlooking possible differences in orthogonalization difficulty and its impact on performance. Through a systematic empirical study, we show that this per-matrix heterogeneity is pervasive and largely determined by matrix geometry, which evolves dynamically across operator types, training stages, and network depths. As a result, uniform NS schedules can lead to uneven orthogonalization quality across the model. Motivated by these findings, we propose Adaptive Muon Orthogonalization (AMO), an observe-then-commit method that measures weight geometry by operator type early in training and then uses these signals to allocate the NS budget for the remainder of training. AMO delivers consistent improvements over uniform-schedule Muon across standard, prolonged, and continual pre-training, surpassing the strongest baseline by +0.76 on Llama3.1-1.4B and +0.51 on Qwen3-1.7B in average downstream performance of 12 evaluation tasks.

Tong Xie, Hanzhi Zhang, Shaozhou Wang et al.

Natural Language Processing (NLP) is widely used to supply summarization ability from long context to structured information. However, extracting structured knowledge from scientific text by NLP models remains a challenge because of its domain-specific nature to complex data preprocessing and the granularity of multi-layered device-level information. To address this, we introduce ByteScience, a non-profit cloud-based auto fine-tuned Large Language Model (LLM) platform, which is designed to extract structured scientific data and synthesize new scientific knowledge from vast scientific corpora. The platform capitalizes on DARWIN, an open-source, fine-tuned LLM dedicated to natural science. The platform was built on Amazon Web Services (AWS) and provides an automated, user-friendly workflow for custom model development and data extraction. The platform achieves remarkable accuracy with only a small amount of well-annotated articles. This innovative tool streamlines the transition from the science literature to structured knowledge and data and benefits the advancements in natural informatics.

Yiheng Zhong, Zihong Luo, Chengzhi Liu et al.

Segment Anything Model (SAM) demonstrates powerful zero-shot capabilities; however, its accuracy and robustness significantly decrease when applied to medical image segmentation. Existing methods address this issue through modality fusion, integrating textual and image information to provide more detailed priors. In this study, we argue that the granularity of text and the domain gap affect the accuracy of the priors. Furthermore, the discrepancy between high-level abstract semantics and pixel-level boundary details in images can introduce noise into the fusion process. To address this, we propose Prior-Guided SAM (PG-SAM), which employs a fine-grained modality prior aligner to leverage specialized medical knowledge for better modality alignment. The core of our method lies in efficiently addressing the domain gap with fine-grained text from a medical LLM. Meanwhile, it also enhances the priors' quality after modality alignment, ensuring more accurate segmentation. In addition, our decoder enhances the model's expressive capabilities through multi-level feature fusion and iterative mask optimizer operations, supporting unprompted learning. We also propose a unified pipeline that effectively supplies high-quality semantic information to SAM. Extensive experiments on the Synapse dataset demonstrate that the proposed PG-SAM achieves state-of-the-art performance. Our code is released at https://github.com/logan-0623/PG-SAM.

Lingzhi Shen, Xiaohao Cai, Yunfei Long et al.

Personality detection from text is commonly performed by analysing users' social media posts. However, existing methods heavily rely on large-scale annotated datasets, making it challenging to obtain high-quality personality labels. Moreover, most studies treat emotion and personality as independent variables, overlooking their interactions. In this paper, we propose a novel self-supervised framework, EmoPerso, which improves personality detection through emotion-aware modelling. EmoPerso first leverages generative mechanisms for synthetic data augmentation and rich representation learning. It then extracts pseudo-labeled emotion features and jointly optimizes them with personality prediction via multi-task learning. A cross-attention module is employed to capture fine-grained interactions between personality traits and the inferred emotional representations. To further refine relational reasoning, EmoPerso adopts a self-taught strategy to enhance the model's reasoning capabilities iteratively. Extensive experiments on two benchmark datasets demonstrate that EmoPerso surpasses state-of-the-art models. The source code is available at https://github.com/slz0925/EmoPerso.

Jianghao Wu, Yicheng Wu, Yutong Xie et al.

Universal medical image segmentation using the Segment Anything Model (SAM) remains challenging due to its limited adaptability to medical domains. Existing adaptations, such as MedSAM, enhance SAM's performance in medical imaging but at the cost of reduced generalization to unseen data. Therefore, in this paper, we propose SAM-aware Test-Time Adaptation (SAM-TTA), a fundamentally different pipeline that preserves the generalization of SAM while improving its segmentation performance in medical imaging via a test-time framework. SAM-TTA tackles two key challenges: (1) input-level discrepancies caused by differences in image acquisition between natural and medical images and (2) semantic-level discrepancies due to fundamental differences in object definition between natural and medical domains (e.g., clear boundaries vs. ambiguous structures). Specifically, our SAM-TTA framework comprises (1) Self-adaptive Bezier Curve-based Transformation (SBCT), which adaptively converts single-channel medical images into three-channel SAM-compatible inputs while maintaining structural integrity, to mitigate the input gap between medical and natural images, and (2) Dual-scale Uncertainty-driven Mean Teacher adaptation (DUMT), which employs consistency learning to align SAM's internal representations to medical semantics, enabling efficient adaptation without auxiliary supervision or expensive retraining. Extensive experiments on five public datasets demonstrate that our SAM-TTA outperforms existing TTA approaches and even surpasses fully fine-tuned models such as MedSAM in certain scenarios, establishing a new paradigm for universal medical image segmentation. Code can be found at https://github.com/JianghaoWu/SAM-TTA.

Zhaodong Wu, Qiaochu Zhao, Ming Hu et al.

With the significantly increasing incidence and prevalence of abdominal diseases, there is a need to embrace greater use of new innovations and technology for the diagnosis and treatment of patients. Although deep-learning methods have notably been developed to assist radiologists in diagnosing abdominal diseases, existing models have the restricted ability to segment common lesions in the abdomen due to missing annotations for typical abdominal pathologies in their training datasets. To address the limitation, we introduce MSWAL, the first 3D Multi-class Segmentation of the Whole Abdominal Lesions dataset, which broadens the coverage of various common lesion types, such as gallstones, kidney stones, liver tumors, kidney tumors, pancreatic cancer, liver cysts, and kidney cysts. With CT scans collected from 694 patients (191,417 slices) of different genders across various scanning phases, MSWAL demonstrates strong robustness and generalizability. The transfer learning experiment from MSWAL to two public datasets, LiTS and KiTS, effectively demonstrates consistent improvements, with Dice Similarity Coefficient (DSC) increase of 3.00% for liver tumors and 0.89% for kidney tumors, demonstrating that the comprehensive annotations and diverse lesion types in MSWAL facilitate effective learning across different domains and data distributions. Furthermore, we propose Inception nnU-Net, a novel segmentation framework that effectively integrates an Inception module with the nnU-Net architecture to extract information from different receptive fields, achieving significant enhancement in both voxel-level DSC and region-level F1 compared to the cutting-edge public algorithms on MSWAL. Our dataset will be released after being accepted, and the code is publicly released at https://github.com/tiuxuxsh76075/MSWAL-.

Ahmed Heakl, Youssef Mohamed, Abdullah Sohail et al.

Multilingual document understanding remains limited for low-resource languages due to scarce training data and model-based annotation pipelines that perpetuate existing biases. We introduce DocAtlas, a framework that constructs high-fidelity OCR datasets and benchmarks covering 82 languages and 9 evaluation tasks. Our dual pipelines, differential rendering of native DOCX documents and synthetic LaTeX-based generation for right-to-left scripts produce precise structural annotations in a unified DocTag format encoding layout, text, and component types, without learned models for core annotation. Evaluating 16 state-of-the-art models reveals persistent gaps in low-resource scripts. We show that Direct Preference Optimization (DPO) using rendering-derived ground truth as positive signal achieves stable multilingual adaptation, improving both in-domain (+1.9%) and out-of-domain (+1.8%) accuracy without measurable base-language degradation, where supervised fine-tuning degrades out-of-domain performance by up to 21%. Our best variant, DocAtlas-DeepSeek, improves +1.7% over the strongest baseline.

Ruiyi Yang, Zechen Li, Hao Xue et al.

Self-evolving language-model agents must decide what to learn next and how to preserve what they have learned across iterations. Existing systems typically carry this cross-iteration knowledge as natural-language feedback, flat episodic memory, or implicit reinforcement signals, none of which cleanly supports a frozen weak backbone at inference time. This paper introduces MAGE (Multi-Agent Graph-guided Evolution), a framework that externalizes self-knowledge into a four-subgraph co-evolutionary knowledge graph. Its experience subgraph stores both teacher-written failure corrections and the learner's own past correct reasoning traces, which are retrieved as task-conditioned guidance for a frozen execution model. During evolution, the graph, a task-level search bandit, and a skill-level routing bandit are updated from the same reward stream, while the learner's backbone remains unchanged. We further provide structural analysis showing how append-only memory growth, bounded curriculum coverage, and task-filtered retrieval together support stable improvement of the retrieval substrate for frozen-learner evolution. Across nine benchmarks spanning mathematical reasoning, multi-hop and open-domain question answering, spatio-temporal analysis, financial numerical reasoning, medical multiple-choice, an open-world survival game, and web navigation, MAGE achieves strong performance against prompt-based frozen-backbone baselines. Ablations show that self-harvested success traces and teacher-written corrections are complementary, with success memories contributing most on reasoning-template-heavy tasks and corrective memories supporting harder composition and interaction settings.

Xiwei Liu, Yulong Li, Feilong Tang et al.

Adapting Large Multimodal Models (LMMs) to real-world scenarios poses the dual challenges of learning from sequential data streams while handling frequent modality incompleteness, a task known as Continual Missing Modality Learning (CMML). However, existing works on CMML have predominantly relied on prompt tuning, a technique that struggles with this task due to cross-task interference between its learnable prompts in their shared embedding space. A naive application of Low-Rank Adaptation (LoRA) with modality-shared module will also suffer modality interference from competing gradients. To this end, we propose DeLo, the first framework to leverage a novel dual-decomposed low-rank expert architecture for CMML. Specifically, this architecture resolves modality interference through decomposed LoRA expert, dynamically composing LoRA update matrix with rank-one factors from disentangled modality-specific factor pools. Embedded within a task-partitioned framework that structurally prevents catastrophic forgetting, this expert system is supported by two key mechanisms: a Cross-Modal Guided Routing strategy to handle incomplete data and a Task-Key Memory for efficient, task-agnostic inference. Extensive experiments on established CMML benchmarks demonstrate that our method significantly outperforms state-of-the-art approaches. This highlights the value of a principled, architecturally-aware LoRA design for real-world multimodal challenges.

Xiao Wu, Ting-Zhu Huang, Liang-Jian Deng et al.

Medical decision-making often involves integrating knowledge from multiple clinical specialties, typically achieved through multidisciplinary teams. Inspired by this collaborative process, recent work has leveraged large language models (LLMs) in multi-agent collaboration frameworks to emulate expert teamwork. While these approaches improve reasoning through agent interaction, they are limited by static, pre-assigned roles, which hinder adaptability and dynamic knowledge integration. To address these limitations, we propose KAMAC, a Knowledge-driven Adaptive Multi-Agent Collaboration framework that enables LLM agents to dynamically form and expand expert teams based on the evolving diagnostic context. KAMAC begins with one or more expert agents and then conducts a knowledge-driven discussion to identify and fill knowledge gaps by recruiting additional specialists as needed. This supports flexible, scalable collaboration in complex clinical scenarios, with decisions finalized through reviewing updated agent comments. Experiments on two real-world medical benchmarks demonstrate that KAMAC significantly outperforms both single-agent and advanced multi-agent methods, particularly in complex clinical scenarios (i.e., cancer prognosis) requiring dynamic, cross-specialty expertise. Our code is publicly available at: https://github.com/XiaoXiao-Woo/KAMAC.

Huifa Li, Jie Fu, Xinlin Zhuang et al.

Accurate cell type annotation is a crucial step in analyzing single-cell RNA sequencing (scRNA-seq) data, which provides valuable insights into cellular heterogeneity. However, due to the high dimensionality and prevalence of zero elements in scRNA-seq data, traditional clustering methods face significant statistical and computational challenges. While some advanced methods use graph neural networks to model cell-cell relationships, they often depend on static graph structures that are sensitive to noise and fail to capture the long-tailed distribution inherent in single-cell populations.To address these limitations, we propose scAGC, a single-cell clustering method that learns adaptive cell graphs with contrastive guidance. Our approach optimizes feature representations and cell graphs simultaneously in an end-to-end manner. Specifically, we introduce a topology-adaptive graph autoencoder that leverages a differentiable Gumbel-Softmax sampling strategy to dynamically refine the graph structure during training. This adaptive mechanism mitigates the problem of a long-tailed degree distribution by promoting a more balanced neighborhood structure. To model the discrete, over-dispersed, and zero-inflated nature of scRNA-seq data, we integrate a Zero-Inflated Negative Binomial (ZINB) loss for robust feature reconstruction. Furthermore, a contrastive learning objective is incorporated to regularize the graph learning process and prevent abrupt changes in the graph topology, ensuring stability and enhancing convergence. Comprehensive experiments on 9 real scRNA-seq datasets demonstrate that scAGC consistently outperforms other state-of-the-art methods, yielding the best NMI and ARI scores on 9 and 7 datasets, respectively.Our code is available at Anonymous Github.

Xinlin Zhuang, Feilong Tang, Haolin Yang et al.

Supervised Fine-Tuning (SFT) plays a pivotal role in adapting Large Language Models (LLMs) to specialized domains such as medical reasoning. However, existing SFT practices often rely on unfiltered datasets that contain redundant and low-quality samples, leading to substantial computational costs and suboptimal performance. Although existing methods attempt to alleviate this problem by selecting data based on sample difficulty, defined by knowledge and reasoning complexity, they overlook each sample's optimization utility reflected in its gradient. Interestingly, we find that gradient-based influence alone favors easy-to-optimize samples that cause large parameter shifts but lack deep reasoning chains, while difficulty alone selects noisy or overly complex cases that fail to guide stable optimization. Based on this observation, we propose a data selection strategy, Difficulty-Influence Quadrant (DIQ), which prioritizes samples in the high-difficulty-high-influence quadrant to balance complex clinical reasoning with substantial gradient influence, enabling efficient medical reasoning with minimal fine-tuning data. Furthermore, Human and LLM-as-a-judge evaluations show that DIQ-selected subsets demonstrate higher data quality and generate clinical reasoning that is more aligned with expert practices in differential diagnosis, safety check, and evidence citation, as DIQ emphasizes samples that foster expert-like reasoning patterns. Extensive experiments on medical reasoning benchmarks demonstrate that DIQ enables models fine-tuned on only 1% of selected data to match full-dataset performance, while using 10% consistently outperforms baseline methods, highlighting the superiority of principled data selection over brute-force scaling. The code and data are available at https://github.com/mihara-bot/DIQ.