Ling-Yun Dai

Xu Wang, Jiaju Kang, Puyu Han et al.

We present ECG-Expert-QA, a comprehensive multimodal dataset for evaluating diagnostic capabilities in electrocardiogram (ECG) interpretation. It combines real-world clinical ECG data with systematically generated synthetic cases, covering 12 essential diagnostic tasks and totaling 47,211 expert-validated QA pairs. These encompass diverse clinical scenarios, from basic rhythm recognition to complex diagnoses involving rare conditions and temporal changes. A key innovation is the support for multi-turn dialogues, enabling the development of conversational medical AI systems that emulate clinician-patient or interprofessional interactions. This allows for more realistic assessment of AI models' clinical reasoning, diagnostic accuracy, and knowledge integration. Constructed through a knowledge-guided framework with strict quality control, ECG-Expert-QA ensures linguistic and clinical consistency, making it a high-quality resource for advancing AI-assisted ECG interpretation. It challenges models with tasks like identifying subtle ischemic changes and interpreting complex arrhythmias in context-rich scenarios. To promote research transparency and collaboration, the dataset, accompanying code, and prompts are publicly released at https://github.com/Zaozzz/ECG-Expert-QA

Jin-Xing Liu, Wen-Yu Xi, Ling-Yun Dai et al.

The emerging research shows that lncRNAs are associated with a series of complex human diseases. However, most of the existing methods have limitations in identifying nonlinear lncRNA-disease associations (LDAs), and it remains a huge challenge to predict new LDAs. Therefore, the accurate identification of LDAs is very important for the warning and treatment of diseases. In this work, multiple sources of biomedical data are fully utilized to construct characteristics of lncRNAs and diseases, and linear and nonlinear characteristics are effectively integrated. Furthermore, a novel deep learning model based on graph attention automatic encoder is proposed, called HGATELDA. To begin with, the linear characteristics of lncRNAs and diseases are created by the miRNA-lncRNA interaction matrix and miRNA-disease interaction matrix. Following this, the nonlinear features of diseases and lncRNAs are extracted using a graph attention auto-encoder, which largely retains the critical information and effectively aggregates the neighborhood information of nodes. In the end, LDAs can be predicted by fusing the linear and nonlinear characteristics of diseases and lncRNA. The HGATELDA model achieves an impressive AUC value of 0.9692 when evaluated using a 5-fold cross-validation indicating its superior performance in comparison to several recent prediction models. Meanwhile, the effectiveness of HGATELDA in identifying novel LDAs is further demonstrated by case studies. the HGATELDA model appears to be a viable computational model for predicting LDAs.