Mingzhe Hu

CV
h-index16
22papers
542citations
Novelty34%
AI Score52

22 Papers

IVApr 29, 2023Code
Polyp-SAM: Transfer SAM for Polyp Segmentation

Yuheng Li, Mingzhe Hu, Xiaofeng Yang

Colon polyps are considered important precursors for colorectal cancer. Automatic segmentation of colon polyps can significantly reduce the misdiagnosis of colon cancer and improve physician annotation efficiency. While many methods have been proposed for polyp segmentation, training large-scale segmentation networks with limited colonoscopy data remains a challenge. Recently, the Segment Anything Model (SAM) has recently gained much attention in both natural and medical image segmentation. SAM demonstrates superior performance in several image benchmarks and therefore shows great potential for medical image segmentation. In this study, we propose Poly-SAM, a finetuned SAM model for polyp segmentation, and compare its performance to several state-of-the-art polyp segmentation models. We also compare two transfer learning strategies of SAM with and without finetuning its encoders. Evaluated on five public datasets, our Polyp-SAM achieves state-of-the-art performance on two datasets and impressive performance on three datasets, with dice scores all above 88%. This study demonstrates the great potential of adapting SAM to medical image segmentation tasks. We plan to release the code and model weights for this paper at: https://github.com/ricklisz/Polyp-SAM.

CVJun 28, 2022
Reinforcement Learning in Medical Image Analysis: Concepts, Applications, Challenges, and Future Directions

Mingzhe Hu, Jiahan Zhang, Luke Matkovic et al.

Motivation: Medical image analysis involves tasks to assist physicians in qualitative and quantitative analysis of lesions or anatomical structures, significantly improving the accuracy and reliability of diagnosis and prognosis. Traditionally, these tasks are finished by physicians or medical physicists and lead to two major problems: (i) low efficiency; (ii) biased by personal experience. In the past decade, many machine learning methods have been applied to accelerate and automate the image analysis process. Compared to the enormous deployments of supervised and unsupervised learning models, attempts to use reinforcement learning in medical image analysis are scarce. This review article could serve as the stepping-stone for related research. Significance: From our observation, though reinforcement learning has gradually gained momentum in recent years, many researchers in the medical analysis field find it hard to understand and deploy in clinics. One cause is lacking well-organized review articles targeting readers lacking professional computer science backgrounds. Rather than providing a comprehensive list of all reinforcement learning models in medical image analysis, this paper may help the readers to learn how to formulate and solve their medical image analysis research as reinforcement learning problems. Approach & Results: We selected published articles from Google Scholar and PubMed. Considering the scarcity of related articles, we also included some outstanding newest preprints. The papers are carefully reviewed and categorized according to the type of image analysis task. We first review the basic concepts and popular models of reinforcement learning. Then we explore the applications of reinforcement learning models in landmark detection. Finally, we conclude the article by discussing the reviewed reinforcement learning approaches' limitations and possible improvements.

CVApr 27, 2023
SkinSAM: Empowering Skin Cancer Segmentation with Segment Anything Model

Mingzhe Hu, Yuheng Li, Xiaofeng Yang

Skin cancer is a prevalent and potentially fatal disease that requires accurate and efficient diagnosis and treatment. Although manual tracing is the current standard in clinics, automated tools are desired to reduce human labor and improve accuracy. However, developing such tools is challenging due to the highly variable appearance of skin cancers and complex objects in the background. In this paper, we present SkinSAM, a fine-tuned model based on the Segment Anything Model that showed outstanding segmentation performance. The models are validated on HAM10000 dataset which includes 10015 dermatoscopic images. While larger models (ViT_L, ViT_H) performed better than the smaller one (ViT_b), the finetuned model (ViT_b_finetuned) exhibited the greatest improvement, with a Mean pixel accuracy of 0.945, Mean dice score of 0.8879, and Mean IoU score of 0.7843. Among the lesion types, vascular lesions showed the best segmentation results. Our research demonstrates the great potential of adapting SAM to medical image segmentation tasks.

CVApr 11, 2023
Advancing Medical Imaging with Language Models: A Journey from N-grams to ChatGPT

Mingzhe Hu, Shaoyan Pan, Yuheng Li et al.

In this paper, we aimed to provide a review and tutorial for researchers in the field of medical imaging using language models to improve their tasks at hand. We began by providing an overview of the history and concepts of language models, with a special focus on large language models. We then reviewed the current literature on how language models are being used to improve medical imaging, emphasizing different applications such as image captioning, report generation, report classification, finding extraction, visual question answering, interpretable diagnosis, and more for various modalities and organs. The ChatGPT was specially highlighted for researchers to explore more potential applications. We covered the potential benefits of accurate and efficient language models for medical imaging analysis, including improving clinical workflow efficiency, reducing diagnostic errors, and assisting healthcare professionals in providing timely and accurate diagnoses. Overall, our goal was to bridge the gap between language models and medical imaging and inspire new ideas and innovations in this exciting area of research. We hope that this review paper will serve as a useful resource for researchers in this field and encourage further exploration of the possibilities of language models in medical imaging.

CVDec 22, 2025
Efficient Vision Mamba for MRI Super-Resolution via Hybrid Selective Scanning

Mojtaba Safari, Shansong Wang, Vanessa L Wildman et al.

Background: High-resolution MRI is critical for diagnosis, but long acquisition times limit clinical use. Super-resolution (SR) can enhance resolution post-scan, yet existing deep learning methods face fidelity-efficiency trade-offs. Purpose: To develop a computationally efficient and accurate deep learning framework for MRI SR that preserves anatomical detail for clinical integration. Materials and Methods: We propose a novel SR framework combining multi-head selective state-space models (MHSSM) with a lightweight channel MLP. The model uses 2D patch extraction with hybrid scanning to capture long-range dependencies. Each MambaFormer block integrates MHSSM, depthwise convolutions, and gated channel mixing. Evaluation used 7T brain T1 MP2RAGE maps (n=142) and 1.5T prostate T2w MRI (n=334). Comparisons included Bicubic interpolation, GANs (CycleGAN, Pix2pix, SPSR), transformers (SwinIR), Mamba (MambaIR), and diffusion models (I2SB, Res-SRDiff). Results: Our model achieved superior performance with exceptional efficiency. For 7T brain data: SSIM=0.951+-0.021, PSNR=26.90+-1.41 dB, LPIPS=0.076+-0.022, GMSD=0.083+-0.017, significantly outperforming all baselines (p<0.001). For prostate data: SSIM=0.770+-0.049, PSNR=27.15+-2.19 dB, LPIPS=0.190+-0.095, GMSD=0.087+-0.013. The framework used only 0.9M parameters and 57 GFLOPs, reducing parameters by 99.8% and computation by 97.5% versus Res-SRDiff, while outperforming SwinIR and MambaIR in accuracy and efficiency. Conclusion: The proposed framework provides an efficient, accurate MRI SR solution, delivering enhanced anatomical detail across datasets. Its low computational demand and state-of-the-art performance show strong potential for clinical translation.

CVAug 4, 2023
Attention-Driven Lightweight Model for Pigmented Skin Lesion Detection

Mingzhe Hu, Xiaofeng Yang

This study presents a lightweight pipeline for skin lesion detection, addressing the challenges posed by imbalanced class distribution and subtle or atypical appearances of some lesions. The pipeline is built around a lightweight model that leverages ghosted features and the DFC attention mechanism to reduce computational complexity while maintaining high performance. The model was trained on the HAM10000 dataset, which includes various types of skin lesions. To address the class imbalance in the dataset, the synthetic minority over-sampling technique and various image augmentation techniques were used. The model also incorporates a knowledge-based loss weighting technique, which assigns different weights to the loss function at the class level and the instance level, helping the model focus on minority classes and challenging samples. This technique involves assigning different weights to the loss function on two levels - the class level and the instance level. By applying appropriate loss weights, the model pays more attention to the minority classes and challenging samples, thus improving its ability to correctly detect and classify different skin lesions. The model achieved an accuracy of 92.4%, a precision of 84.2%, a recall of 86.9%, a f1-score of 85.4% with particularly strong performance in identifying Benign Keratosis-like lesions (BKL) and Nevus (NV). Despite its superior performance, the model's computational cost is considerably lower than some models with less accuracy, making it an optimal solution for real-world applications where both accuracy and efficiency are essential.

CVSep 2, 2025Code
MedDINOv3: How to adapt vision foundation models for medical image segmentation?

Yuheng Li, Yizhou Wu, Yuxiang Lai et al.

Accurate segmentation of organs and tumors in CT and MRI scans is essential for diagnosis, treatment planning, and disease monitoring. While deep learning has advanced automated segmentation, most models remain task-specific, lacking generalizability across modalities and institutions. Vision foundation models (FMs) pretrained on billion-scale natural images offer powerful and transferable representations. However, adapting them to medical imaging faces two key challenges: (1) the ViT backbone of most foundation models still underperform specialized CNNs on medical image segmentation, and (2) the large domain gap between natural and medical images limits transferability. We introduce MedDINOv3, a simple and effective framework for adapting DINOv3 to medical segmentation. We first revisit plain ViTs and design a simple and effective architecture with multi-scale token aggregation. Then, we perform domain-adaptive pretraining on CT-3M, a curated collection of 3.87M axial CT slices, using a multi-stage DINOv3 recipe to learn robust dense features. MedDINOv3 matches or exceeds state-of-the-art performance across four segmentation benchmarks, demonstrating the potential of vision foundation models as unified backbones for medical image segmentation. The code is available at https://github.com/ricklisz/MedDINOv3.

CLAug 11, 2025
Capabilities of GPT-5 on Multimodal Medical Reasoning

Shansong Wang, Mingzhe Hu, Qiang Li et al.

Recent advances in large language models (LLMs) have enabled general-purpose systems to perform increasingly complex domain-specific reasoning without extensive fine-tuning. In the medical domain, decision-making often requires integrating heterogeneous information sources, including patient narratives, structured data, and medical images. This study positions GPT-5 as a generalist multimodal reasoner for medical decision support and systematically evaluates its zero-shot chain-of-thought reasoning performance on both text-based question answering and visual question answering tasks under a unified protocol. We benchmark GPT-5, GPT-5-mini, GPT-5-nano, and GPT-4o-2024-11-20 against standardized splits of MedQA, MedXpertQA (text and multimodal), MMLU medical subsets, USMLE self-assessment exams, and VQA-RAD. Results show that GPT-5 consistently outperforms all baselines, achieving state-of-the-art accuracy across all QA benchmarks and delivering substantial gains in multimodal reasoning. On MedXpertQA MM, GPT-5 improves reasoning and understanding scores by +29.26% and +26.18% over GPT-4o, respectively, and surpasses pre-licensed human experts by +24.23% in reasoning and +29.40% in understanding. In contrast, GPT-4o remains below human expert performance in most dimensions. A representative case study demonstrates GPT-5's ability to integrate visual and textual cues into a coherent diagnostic reasoning chain, recommending appropriate high-stakes interventions. Our results show that, on these controlled multimodal reasoning benchmarks, GPT-5 moves from human-comparable to above human-expert performance. This improvement may substantially inform the design of future clinical decision-support systems.

LGApr 30
BrainDINO: A Brain MRI Foundation Model for Generalizable Clinical Representation Learning

Yizhou Wu, Shansong Wang, Yuheng Li et al.

Brain MRI underpins a wide range of neuroscientific and clinical applications, yet most learning-based methods remain task-specific and require substantial labeled data. Here we show that a single self-supervised representation can generalize across heterogeneous brain MRI endpoints. We trained BrainDINO, a self-distilled foundation model, on approximately 6.6 million unlabeled axial slices from 20 datasets encompassing broad variation in population, disease, and acquisition setting. Using a frozen encoder with lightweight task heads, BrainDINO supported transfer across tumor segmentation, neurodegenerative and neurodevelopmental conditions classification, brain age estimation, post-stroke temporal prediction, molecular status prediction, MRI sequence classification, and survival modeling. Across tasks and supervision regimes, BrainDINO consistently equaled or exceeded natural-image and MRI-specific self-supervised baselines, with particularly strong advantages under label scarcity. Representation analyses further showed anatomically organized and pathology-sensitive feature structure in the absence of task-specific supervision. Our findings indicate that large-scale slice-wise self-supervised learning can yield a unified brain MRI representation that supports diverse neuroimaging tasks without volumetric pretraining or full-network fine-tuning, establishing a scalable foundation for robust and data-efficient brain imaging analysis.

CVApr 24, 2024
Mammo-CLIP: Leveraging Contrastive Language-Image Pre-training (CLIP) for Enhanced Breast Cancer Diagnosis with Multi-view Mammography

Xuxin Chen, Yuheng Li, Mingzhe Hu et al.

Although fusion of information from multiple views of mammograms plays an important role to increase accuracy of breast cancer detection, developing multi-view mammograms-based computer-aided diagnosis (CAD) schemes still faces challenges and no such CAD schemes have been used in clinical practice. To overcome the challenges, we investigate a new approach based on Contrastive Language-Image Pre-training (CLIP), which has sparked interest across various medical imaging tasks. By solving the challenges in (1) effectively adapting the single-view CLIP for multi-view feature fusion and (2) efficiently fine-tuning this parameter-dense model with limited samples and computational resources, we introduce Mammo-CLIP, the first multi-modal framework to process multi-view mammograms and corresponding simple texts. Mammo-CLIP uses an early feature fusion strategy to learn multi-view relationships in four mammograms acquired from the CC and MLO views of the left and right breasts. To enhance learning efficiency, plug-and-play adapters are added into CLIP image and text encoders for fine-tuning parameters and limiting updates to about 1% of the parameters. For framework evaluation, we assembled two datasets retrospectively. The first dataset, comprising 470 malignant and 479 benign cases, was used for few-shot fine-tuning and internal evaluation of the proposed Mammo-CLIP via 5-fold cross-validation. The second dataset, including 60 malignant and 294 benign cases, was used to test generalizability of Mammo-CLIP. Study results show that Mammo-CLIP outperforms the state-of-art cross-view transformer in AUC (0.841 vs. 0.817, 0.837 vs. 0.807) on both datasets. It also surpasses previous two CLIP-based methods by 20.3% and 14.3%. This study highlights the potential of applying the finetuned vision-language models for developing next-generation, image-text-based CAD schemes of breast cancer.

CVJun 27, 2025
Unifying Biomedical Vision-Language Expertise: Towards a Generalist Foundation Model via Multi-CLIP Knowledge Distillation

Shansong Wang, Zhecheng Jin, Mingzhe Hu et al.

CLIP models pretrained on natural images with billion-scale image-text pairs have demonstrated impressive capabilities in zero-shot classification, cross-modal retrieval, and open-ended visual answering. However, transferring this success to biomedicine is hindered by the scarcity of large-scale biomedical image-text corpora, the heterogeneity of image modalities, and fragmented data standards across institutions. These limitations hinder the development of a unified and generalizable biomedical foundation model trained from scratch. To overcome this, we introduce MMKD-CLIP, a generalist biomedical foundation model developed via Multiple Medical CLIP Knowledge Distillation. Rather than relying on billion-scale raw data, MMKD-CLIP distills knowledge from nine state-of-the-art domain-specific or generalist biomedical CLIP models, each pretrained on millions of biomedical image-text pairs. Our two-stage training pipeline first performs CLIP-style pretraining on over 2.9 million biomedical image-text pairs from 26 image modalities, followed by feature-level distillation using over 19.2 million feature pairs extracted from teacher models. We evaluate MMKD-CLIP on 58 diverse biomedical datasets, encompassing over 10.8 million biomedical images across nine image modalities. The evaluation spans six core task types: zero-shot classification, linear probing, cross-modal retrieval, visual question answering, survival prediction, and cancer diagnosis. MMKD-CLIP consistently outperforms all teacher models while demonstrating remarkable robustness and generalization across image domains and task settings. These results underscore that multi-teacher knowledge distillation is a scalable and effective paradigm for building high-performing biomedical foundation models under the practical constraints of real-world data availability.

CVAug 20, 2025
DINOv3 with Test-Time Training for Medical Image Registration

Shansong Wang, Mojtaba Safari, Mingzhe Hu et al.

Prior medical image registration approaches, particularly learning-based methods, often require large amounts of training data, which constrains clinical adoption. To overcome this limitation, we propose a training-free pipeline that relies on a frozen DINOv3 encoder and test-time optimization of the deformation field in feature space. Across two representative benchmarks, the method is accurate and yields regular deformations. On Abdomen MR-CT, it attained the best mean Dice score (DSC) of 0.790 together with the lowest 95th percentile Hausdorff Distance (HD95) of 4.9+-5.0 and the lowest standard deviation of Log-Jacobian (SDLogJ) of 0.08+-0.02. On ACDC cardiac MRI, it improves mean DSC to 0.769 and reduces SDLogJ to 0.11 and HD95 to 4.8, a marked gain over the initial alignment. The results indicate that operating in a compact foundation feature space at test time offers a practical and general solution for clinical registration without additional training.

IVAug 15, 2025
Benchmarking GPT-5 for Zero-Shot Multimodal Medical Reasoning in Radiology and Radiation Oncology

Mingzhe Hu, Zach Eidex, Shansong Wang et al.

Radiology, radiation oncology, and medical physics require decision-making that integrates medical images, textual reports, and quantitative data under high-stakes conditions. With the introduction of GPT-5, it is critical to assess whether recent advances in large multimodal models translate into measurable gains in these safety-critical domains. We present a targeted zero-shot evaluation of GPT-5 and its smaller variants (GPT-5-mini, GPT-5-nano) against GPT-4o across three representative tasks. We present a targeted zero-shot evaluation of GPT-5 and its smaller variants (GPT-5-mini, GPT-5-nano) against GPT-4o across three representative tasks: (1) VQA-RAD, a benchmark for visual question answering in radiology; (2) SLAKE, a semantically annotated, multilingual VQA dataset testing cross-modal grounding; and (3) a curated Medical Physics Board Examination-style dataset of 150 multiple-choice questions spanning treatment planning, dosimetry, imaging, and quality assurance. Across all datasets, GPT-5 achieved the highest accuracy, with substantial gains over GPT-4o up to +20.00% in challenging anatomical regions such as the chest-mediastinal, +13.60% in lung-focused questions, and +11.44% in brain-tissue interpretation. On the board-style physics questions, GPT-5 attained 90.7% accuracy (136/150), exceeding the estimated human passing threshold, while GPT-4o trailed at 78.0%. These results demonstrate that GPT-5 delivers consistent and often pronounced performance improvements over GPT-4o in both image-grounded reasoning and domain-specific numerical problem-solving, highlighting its potential to augment expert workflows in medical imaging and therapeutic physics.

CVAug 14, 2025
Performance of GPT-5 in Brain Tumor MRI Reasoning

Mojtaba Safari, Shansong Wang, Mingzhe Hu et al.

Accurate differentiation of brain tumor types on magnetic resonance imaging (MRI) is critical for guiding treatment planning in neuro-oncology. Recent advances in large language models (LLMs) have enabled visual question answering (VQA) approaches that integrate image interpretation with natural language reasoning. In this study, we evaluated GPT-4o, GPT-5-nano, GPT-5-mini, and GPT-5 on a curated brain tumor VQA benchmark derived from 3 Brain Tumor Segmentation (BraTS) datasets - glioblastoma (GLI), meningioma (MEN), and brain metastases (MET). Each case included multi-sequence MRI triplanar mosaics and structured clinical features transformed into standardized VQA items. Models were assessed in a zero-shot chain-of-thought setting for accuracy on both visual and reasoning tasks. Results showed that GPT-5-mini achieved the highest macro-average accuracy (44.19%), followed by GPT-5 (43.71%), GPT-4o (41.49%), and GPT-5-nano (35.85%). Performance varied by tumor subtype, with no single model dominating across all cohorts. These findings suggest that GPT-5 family models can achieve moderate accuracy in structured neuro-oncological VQA tasks, but not at a level acceptable for clinical use.

CVJun 16, 2025
Limited-Angle CBCT Reconstruction via Geometry-Integrated Cycle-domain Denoising Diffusion Probabilistic Models

Yuan Gao, Shaoyan Pan, Mingzhe Hu et al.

Cone-beam CT (CBCT) is widely used in clinical radiotherapy for image-guided treatment, improving setup accuracy, adaptive planning, and motion management. However, slow gantry rotation limits performance by introducing motion artifacts, blurring, and increased dose. This work aims to develop a clinically feasible method for reconstructing high-quality CBCT volumes from consecutive limited-angle acquisitions, addressing imaging challenges in time- or dose-constrained settings. We propose a limited-angle (LA) geometry-integrated cycle-domain (LA-GICD) framework for CBCT reconstruction, comprising two denoising diffusion probabilistic models (DDPMs) connected via analytic cone-beam forward and back projectors. A Projection-DDPM completes missing projections, followed by back-projection, and an Image-DDPM refines the volume. This dual-domain design leverages complementary priors from projection and image spaces to achieve high-quality reconstructions from limited-angle (<= 90 degrees) scans. Performance was evaluated against full-angle reconstruction. Four board-certified medical physicists conducted assessments. A total of 78 planning CTs in common CBCT geometries were used for training and evaluation. The method achieved a mean absolute error of 35.5 HU, SSIM of 0.84, and PSNR of 29.8 dB, with visibly reduced artifacts and improved soft-tissue clarity. LA-GICD's geometry-aware dual-domain learning, embedded in analytic forward/backward operators, enabled artifact-free, high-contrast reconstructions from a single 90-degree scan, reducing acquisition time and dose four-fold. LA-GICD improves limited-angle CBCT reconstruction with strong data fidelity and anatomical realism. It offers a practical solution for short-arc acquisitions, enhancing CBCT use in radiotherapy by providing clinically applicable images with reduced scan time and dose for more accurate, personalized treatments.

SEDec 8, 2025
RisConFix: LLM-based Automated Repair of Risk-Prone Drone Configurations

Liping Han, Tingting Nie, Le Yu et al.

Flight control software is typically designed with numerous configurable parameters governing multiple functionalities, enabling flexible adaptation to mission diversity and environmental uncertainty. Although developers and manufacturers usually provide recommendations for these parameters to ensure safe and stable operations, certain combinations of parameters with recommended values may still lead to unstable flight behaviors, thereby degrading the drone's robustness. To this end, we propose a Large Language Model (LLM) based approach for real-time repair of risk-prone configurations (named RisConFix) that degrade drone robustness. RisConFix continuously monitors the drone's operational state and automatically triggers a repair mechanism once abnormal flight behaviors are detected. The repair mechanism leverages an LLM to analyze relationships between configuration parameters and flight states, and then generates corrective parameter updates to restore flight stability. To ensure the validity of the updated configuration, RisConFix operates as an iterative process; it continuously monitors the drone's flight state and, if an anomaly persists after applying an update, automatically triggers the next repair cycle. We evaluated RisConFix through a case study of ArduPilot (with 1,421 groups of misconfigurations). Experimental results show that RisConFix achieved a best repair success rate of 97% and an optimal average number of repairs of 1.17, demonstrating its capability to effectively and efficiently repair risk-prone configurations in real time.

CVMar 5
Evaluating GPT-5 as a Multimodal Clinical Reasoner: A Landscape Commentary

Alexandru Florea, Shansong Wang, Mingzhe Hu et al.

The transition from task-specific artificial intelligence toward general-purpose foundation models raises fundamental questions about their capacity to support the integrated reasoning required in clinical medicine, where diagnosis demands synthesis of ambiguous patient narratives, laboratory data, and multimodal imaging. This landscape commentary provides the first controlled, cross-sectional evaluation of the GPT-5 family (GPT-5, GPT-5 Mini, GPT-5 Nano) against its predecessor GPT-4o across a diverse spectrum of clinically grounded tasks, including medical education examinations, text-based reasoning benchmarks, and visual question-answering in neuroradiology, digital pathology, and mammography using a standardized zero-shot chain-of-thought protocol. GPT-5 demonstrated substantial gains in expert-level textual reasoning, with absolute improvements exceeding 25 percentage-points on MedXpertQA. When tasked with multimodal synthesis, GPT-5 effectively leveraged this enhanced reasoning capacity to ground uncertain clinical narratives in concrete imaging evidence, achieving state-of-the-art or competitive performance across most VQA benchmarks and outperforming GPT-4o by margins of 10-40% in mammography tasks requiring fine-grained lesion characterization. However, performance remained moderate in neuroradiology (44% macro-average accuracy) and lagged behind domain-specific models in mammography, where specialized systems exceed 80% accuracy compared to GPT-5's 52-64%. These findings indicate that while GPT-5 represents a meaningful advance toward integrated multimodal clinical reasoning, mirroring the clinician's cognitive process of biasing uncertain information with objective findings, generalist models are not yet substitutes for purpose-built systems in highly specialized, perception-critical tasks.

CVOct 19, 2025
Foundation Models in Medical Image Analysis: A Systematic Review and Meta-Analysis

Praveenbalaji Rajendran, Mojtaba Safari, Wenfeng He et al.

Recent advancements in artificial intelligence (AI), particularly foundation models (FMs), have revolutionized medical image analysis, demonstrating strong zero- and few-shot performance across diverse medical imaging tasks, from segmentation to report generation. Unlike traditional task-specific AI models, FMs leverage large corpora of labeled and unlabeled multimodal datasets to learn generalized representations that can be adapted to various downstream clinical applications with minimal fine-tuning. However, despite the rapid proliferation of FM research in medical imaging, the field remains fragmented, lacking a unified synthesis that systematically maps the evolution of architectures, training paradigms, and clinical applications across modalities. To address this gap, this review article provides a comprehensive and structured analysis of FMs in medical image analysis. We systematically categorize studies into vision-only and vision-language FMs based on their architectural foundations, training strategies, and downstream clinical tasks. Additionally, a quantitative meta-analysis of the studies was conducted to characterize temporal trends in dataset utilization and application domains. We also critically discuss persistent challenges, including domain adaptation, efficient fine-tuning, computational constraints, and interpretability along with emerging solutions such as federated learning, knowledge distillation, and advanced prompting. Finally, we identify key future research directions aimed at enhancing the robustness, explainability, and clinical integration of FMs, thereby accelerating their translation into real-world medical practice.

CVAug 15, 2025
Is ChatGPT-5 Ready for Mammogram VQA?

Qiang Li, Shansong Wang, Mingzhe Hu et al.

Mammogram visual question answering (VQA) integrates image interpretation with clinical reasoning and has potential to support breast cancer screening. We systematically evaluated the GPT-5 family and GPT-4o model on four public mammography datasets (EMBED, InBreast, CMMD, CBIS-DDSM) for BI-RADS assessment, abnormality detection, and malignancy classification tasks. GPT-5 consistently was the best performing model but lagged behind both human experts and domain-specific fine-tuned models. On EMBED, GPT-5 achieved the highest scores among GPT variants in density (56.8%), distortion (52.5%), mass (64.5%), calcification (63.5%), and malignancy (52.8%) classification. On InBreast, it attained 36.9% BI-RADS accuracy, 45.9% abnormality detection, and 35.0% malignancy classification. On CMMD, GPT-5 reached 32.3% abnormality detection and 55.0% malignancy accuracy. On CBIS-DDSM, it achieved 69.3% BI-RADS accuracy, 66.0% abnormality detection, and 58.2% malignancy accuracy. Compared with human expert estimations, GPT-5 exhibited lower sensitivity (63.5%) and specificity (52.3%). While GPT-5 exhibits promising capabilities for screening tasks, its performance remains insufficient for high-stakes clinical imaging applications without targeted domain adaptation and optimization. However, the tremendous improvements in performance from GPT-4o to GPT-5 show a promising trend in the potential for general large language models (LLMs) to assist with mammography VQA tasks.

CVJun 1, 2025
A Large Convolutional Neural Network for Clinical Target and Multi-organ Segmentation in Gynecologic Brachytherapy with Multi-stage Learning

Mingzhe Hu, Yuan Gao, Yuheng Li et al.

Purpose: Accurate segmentation of clinical target volumes (CTV) and organs-at-risk is crucial for optimizing gynecologic brachytherapy (GYN-BT) treatment planning. However, anatomical variability, low soft-tissue contrast in CT imaging, and limited annotated datasets pose significant challenges. This study presents GynBTNet, a novel multi-stage learning framework designed to enhance segmentation performance through self-supervised pretraining and hierarchical fine-tuning strategies. Methods: GynBTNet employs a three-stage training strategy: (1) self-supervised pretraining on large-scale CT datasets using sparse submanifold convolution to capture robust anatomical representations, (2) supervised fine-tuning on a comprehensive multi-organ segmentation dataset to refine feature extraction, and (3) task-specific fine-tuning on a dedicated GYN-BT dataset to optimize segmentation performance for clinical applications. The model was evaluated against state-of-the-art methods using the Dice Similarity Coefficient (DSC), 95th percentile Hausdorff Distance (HD95), and Average Surface Distance (ASD). Results: Our GynBTNet achieved superior segmentation performance, significantly outperforming nnU-Net and Swin-UNETR. Notably, it yielded a DSC of 0.837 +/- 0.068 for CTV, 0.940 +/- 0.052 for the bladder, 0.842 +/- 0.070 for the rectum, and 0.871 +/- 0.047 for the uterus, with reduced HD95 and ASD compared to baseline models. Self-supervised pretraining led to consistent performance improvements, particularly for structures with complex boundaries. However, segmentation of the sigmoid colon remained challenging, likely due to anatomical ambiguities and inter-patient variability. Statistical significance analysis confirmed that GynBTNet's improvements were significant compared to baseline models.

IVMar 18, 2025
RoMedFormer: A Rotary-Embedding Transformer Foundation Model for 3D Genito-Pelvic Structure Segmentation in MRI and CT

Yuheng Li, Mingzhe Hu, Richard L. J. Qiu et al.

Deep learning-based segmentation of genito-pelvic structures in MRI and CT is crucial for applications such as radiation therapy, surgical planning, and disease diagnosis. However, existing segmentation models often struggle with generalizability across imaging modalities, and anatomical variations. In this work, we propose RoMedFormer, a rotary-embedding transformer-based foundation model designed for 3D female genito-pelvic structure segmentation in both MRI and CT. RoMedFormer leverages self-supervised learning and rotary positional embeddings to enhance spatial feature representation and capture long-range dependencies in 3D medical data. We pre-train our model using a diverse dataset of 3D MRI and CT scans and fine-tune it for downstream segmentation tasks. Experimental results demonstrate that RoMedFormer achieves superior performance segmenting genito-pelvic organs. Our findings highlight the potential of transformer-based architectures in medical image segmentation and pave the way for more transferable segmentation frameworks.

IVMay 21, 2023
BreastSAM: A Study of Segment Anything Model for Breast Tumor Detection in Ultrasound Images

Mingzhe Hu, Yuheng Li, Xiaofeng Yang

Breast cancer is one of the most common cancers among women worldwide, with early detection significantly increasing survival rates. Ultrasound imaging is a critical diagnostic tool that aids in early detection by providing real-time imaging of the breast tissue. We conducted a thorough investigation of the Segment Anything Model (SAM) for the task of interactive segmentation of breast tumors in ultrasound images. We explored three pre-trained model variants: ViT_h, ViT_l, and ViT_b, among which ViT_l demonstrated superior performance in terms of mean pixel accuracy, Dice score, and IoU score. The significance of prompt interaction in improving the model's segmentation performance was also highlighted, with substantial improvements in performance metrics when prompts were incorporated. The study further evaluated the model's differential performance in segmenting malignant and benign breast tumors, with the model showing exceptional proficiency in both categories, albeit with slightly better performance for benign tumors. Furthermore, we analyzed the impacts of various breast tumor characteristics - size, contrast, aspect ratio, and complexity - on segmentation performance. Our findings reveal that tumor contrast and size positively impact the segmentation result, while complex boundaries pose challenges. The study provides valuable insights for using SAM as a robust and effective algorithm for breast tumor segmentation in ultrasound images.