Yumeng Wang

Hao Jiang, Rushan Zhang, Yanning Zhou et al.

Cell instance segmentation in cytology images has significant importance for biology analysis and cancer screening, while remains challenging due to 1) the extensive overlapping translucent cell clusters that cause the ambiguous boundaries, and 2) the confusion of mimics and debris as nuclei. In this work, we proposed a De-overlapping Network (DoNet) in a decompose-and-recombined strategy. A Dual-path Region Segmentation Module (DRM) explicitly decomposes the cell clusters into intersection and complement regions, followed by a Semantic Consistency-guided Recombination Module (CRM) for integration. To further introduce the containment relationship of the nucleus in the cytoplasm, we design a Mask-guided Region Proposal Strategy (MRP) that integrates the cell attention maps for inner-cell instance prediction. We validate the proposed approach on ISBI2014 and CPS datasets. Experiments show that our proposed DoNet significantly outperforms other state-of-the-art (SOTA) cell instance segmentation methods. The code is available at https://github.com/DeepDoNet/DoNet.

Chu Han, Xipeng Pan, Lixu Yan et al.

Lung cancer is the leading cause of cancer death worldwide, and adenocarcinoma (LUAD) is the most common subtype. Exploiting the potential value of the histopathology images can promote precision medicine in oncology. Tissue segmentation is the basic upstream task of histopathology image analysis. Existing deep learning models have achieved superior segmentation performance but require sufficient pixel-level annotations, which is time-consuming and expensive. To enrich the label resources of LUAD and to alleviate the annotation efforts, we organize this challenge WSSS4LUAD to call for the outstanding weakly-supervised semantic segmentation (WSSS) techniques for histopathology images of LUAD. Participants have to design the algorithm to segment tumor epithelial, tumor-associated stroma and normal tissue with only patch-level labels. This challenge includes 10,091 patch-level annotations (the training set) and over 130 million labeled pixels (the validation and test sets), from 87 WSIs (67 from GDPH, 20 from TCGA). All the labels were generated by a pathologist-in-the-loop pipeline with the help of AI models and checked by the label review board. Among 532 registrations, 28 teams submitted the results in the test phase with over 1,000 submissions. Finally, the first place team achieved mIoU of 0.8413 (tumor: 0.8389, stroma: 0.7931, normal: 0.8919). According to the technical reports of the top-tier teams, CAM is still the most popular approach in WSSS. Cutmix data augmentation has been widely adopted to generate more reliable samples. With the success of this challenge, we believe that WSSS approaches with patch-level annotations can be a complement to the traditional pixel annotations while reducing the annotation efforts. The entire dataset has been released to encourage more researches on computational pathology in LUAD and more novel WSSS techniques.

Yumeng Wang, Lijun Lyu, Avishek Anand

Contextual ranking models based on BERT are now well established for a wide range of passage and document ranking tasks. However, the robustness of BERT-based ranking models under adversarial inputs is under-explored. In this paper, we argue that BERT-rankers are not immune to adversarial attacks targeting retrieved documents given a query. Firstly, we propose algorithms for adversarial perturbation of both highly relevant and non-relevant documents using gradient-based optimization methods. The aim of our algorithms is to add/replace a small number of tokens to a highly relevant or non-relevant document to cause a large rank demotion or promotion. Our experiments show that a small number of tokens can already result in a large change in the rank of a document. Moreover, we find that BERT-rankers heavily rely on the document start/head for relevance prediction, making the initial part of the document more susceptible to adversarial attacks. More interestingly, we find a small set of recurring adversarial words that when added to documents result in successful rank demotion/promotion of any relevant/non-relevant document respectively. Finally, our adversarial tokens also show particular topic preferences within and across datasets, exposing potential biases from BERT pre-training or downstream datasets.

Yin Xie, Kaicheng Yang, Peirou Liang et al.

Large Multimodal Models (LMMs) often face a modality representation gap during pretraining: while language embeddings remain stable, visual representations are highly sensitive to contextual noise (e.g., background clutter). To address this issue, we introduce a visual comprehension stage, which we call ViCToR (Visual Comprehension via Token Reconstruction), a novel pretraining framework for LMMs. ViCToR employs a learnable visual token pool and utilizes the Hungarian matching algorithm to select semantically relevant tokens from this pool for visual token replacement. Furthermore, by integrating a visual token reconstruction loss with dense semantic supervision, ViCToR can learn tokens which retain high visual detail, thereby enhancing the large language model's (LLM's) understanding of visual information. After pretraining on 3 million publicly accessible images and captions, ViCToR achieves state-of-the-art results, improving over LLaVA-NeXT-8B by 10.4%, 3.2%, and 7.2% on the MMStar, SEED$^I$, and RealWorldQA benchmarks, respectively. Code is available at https://github.com/deepglint/Victor.

Yumeng Wang, Zhiyuan Fan, Qingyun Wang et al.

Large Language Models (LLMs) are pretrained on extensive multilingual corpora to acquire both language-specific cultural knowledge and general knowledge. Ideally, while LLMs should provide consistent responses to culture-independent questions across languages, we observe significant performance disparities. To address this, we explore the Cross-Lingual Self-Aligning ability of Language Models (CALM) to align knowledge across languages. Specifically, for a given question, we sample multiple responses across different languages and select the most self-consistent response as the target, leaving the remaining responses as negative examples. We then employ direct preference optimization (DPO) to align the model's knowledge across different languages. Evaluations on the MEDQA and X-CSQA datasets demonstrate CALM's effectiveness in enhancing cross-lingual knowledge question answering, both in zero-shot and retrieval-augmented settings. We also found that increasing the number of languages involved in CALM training leads to higher accuracy and consistency. We offer a qualitative analysis of how cross-lingual consistency can enhance knowledge alignment and explore the method's generalizability.

Yumeng Wang, Ziran Zhou, Junjin Wang

Effective sentence embeddings that capture semantic nuances and generalize well across diverse contexts are crucial for natural language processing tasks. We address this challenge by applying SimCSE (Simple Contrastive Learning of Sentence Embeddings) using contrastive learning to fine-tune the minBERT model for sentiment analysis, semantic textual similarity (STS), and paraphrase detection. Our contributions include experimenting with three different dropout techniques, namely standard dropout, curriculum dropout, and adaptive dropout, to tackle overfitting, proposing a novel 2-Tier SimCSE Fine-tuning Model that combines both unsupervised and supervised SimCSE on STS task, and exploring transfer learning potential for Paraphrase and SST tasks. Our findings demonstrate the effectiveness of SimCSE, with the 2-Tier model achieving superior performance on the STS task, with an average test score of 0.742 across all three downstream tasks. The results of error analysis reveals challenges in handling complex sentiments and reliance on lexical overlap for paraphrase detection, highlighting areas for future research. The ablation study revealed that removing Adaptive Dropout in the Single-Task Unsupervised SimCSE Model led to improved performance on the STS task, indicating overfitting due to added parameters. Transfer learning from SimCSE models on Paraphrase and SST tasks did not enhance performance, suggesting limited transferability of knowledge from the STS task.

Zijian Zhang, Vinay Setty, Yumeng Wang et al.

With the rapid advancement of neural language models, the deployment of over-parameterized models has surged, increasing the need for interpretable explanations comprehensible to human inspectors. Existing post-hoc interpretability methods, which often focus on unigram features of single input textual instances, fail to capture the models' decision-making process fully. Additionally, many methods do not differentiate between decisions based on spurious correlations and those based on a holistic understanding of the input. Our paper introduces DISCO, a novel method for discovering global, rule-based explanations by identifying causal n-gram associations with model predictions. This method employs a scalable sequence mining technique to extract relevant text spans from training data, associate them with model predictions, and conduct causality checks to distill robust rules that elucidate model behavior. These rules expose potential overfitting and provide insights into misleading feature combinations. We validate DISCO through extensive testing, demonstrating its superiority over existing methods in offering comprehensive insights into complex model behaviors. Our approach successfully identifies all shortcuts manually introduced into the training data (100% detection rate on the MultiRC dataset), resulting in an 18.8% regression in model performance -- a capability unmatched by any other method. Furthermore, DISCO supports interactive explanations, enabling human inspectors to distinguish spurious causes in the rule-based output. This alleviates the burden of abundant instance-wise explanations and helps assess the model's risk when encountering out-of-distribution (OOD) data.

Yumeng Wang, Zhenyang Xiao

Large Language Models (LLMs) face limitations due to the high demand on GPU memory and computational resources when handling long contexts. While sparsify the Key-Value (KV) cache of transformer model is a typical strategy to alleviate resource usage, it unavoidably results in the loss of information. We introduce Lossless Compressed Memory Attention (LoMA), a novel approach that enables lossless compression of the KV cache, thereby reducing the memory and computational demands during autoregressive generation. LoMA incorporates a specialized training or fine-tuning precedure alongside an autoregressive generation algorithm optimized for the compressed context. Our method compresses the KV cache after every $tc$ generated tokens with a compression ratio of $c$ and a target compressed length $t$, and this process occurs within a single inference pass without dependency on auxiliary models. We engineered an efficient training scheme involving specific inputs, attention masks, and position identifiers to instill this compression capability. Experimental validation has demonstrated that LoMA significantly reducing computational consumption and memory usage through achieving lossless KV cache compression.

Yaxing Wang, Qiong Li, Qi Han et al.

As the Quantum Key Distribution (QKD) technology supporting the pointto-point application matures, the need to build the Quantum Secure Communication Network (QSCN) to guarantee the security of a large scale of nodes becomes urgent. Considering the project time and expense control, it is the first choice to build the QSCN based on an existing classical network. Suitable modeling and simulation are very important to construct a QSCN successfully and efficiently. In this paper, a practical QSCN model, which can reflect the network state well, is proposed. The model considers the volatile traffic demand of the classical network and the real key generation capability of the QKD devices, which can enhance the accuracy of simulation to a great extent. In addition, two unique QSCN performance indicators, ITS (information-theoretic secure) communication capability and ITS communication efficiency, are proposed in the model, which are necessary supplements for the evaluation of a QSCN except for those traditional performance indicators of classical networks. Finally, the accuracy of the proposed QSCN model and the necessity of the proposed performance indicators are verified by plentiful simulations results.