Alejandra Perez

CV
h-index60
5papers
79citations
Novelty49%
AI Score47

5 Papers

CVOct 17, 2025Code
CARDIUM: Congenital Anomaly Recognition with Diagnostic Images and Unified Medical records

Daniela Vega, Hannah V. Ceballos, Javier S. Vera et al.

Prenatal diagnosis of Congenital Heart Diseases (CHDs) holds great potential for Artificial Intelligence (AI)-driven solutions. However, collecting high-quality diagnostic data remains difficult due to the rarity of these conditions, resulting in imbalanced and low-quality datasets that hinder model performance. Moreover, no public efforts have been made to integrate multiple sources of information, such as imaging and clinical data, further limiting the ability of AI models to support and enhance clinical decision-making. To overcome these challenges, we introduce the Congenital Anomaly Recognition with Diagnostic Images and Unified Medical records (CARDIUM) dataset, the first publicly available multimodal dataset consolidating fetal ultrasound and echocardiographic images along with maternal clinical records for prenatal CHD detection. Furthermore, we propose a robust multimodal transformer architecture that incorporates a cross-attention mechanism to fuse feature representations from image and tabular data, improving CHD detection by 11% and 50% over image and tabular single-modality approaches, respectively, and achieving an F1 score of 79.8 $\pm$ 4.8% in the CARDIUM dataset. We will publicly release our dataset and code to encourage further research on this unexplored field. Our dataset and code are available at https://github.com/BCV-Uniandes/Cardium, and at the project website https://bcv-uniandes.github.io/CardiumPage/

CVSep 9, 2025Code
SurgLaVi: Large-Scale Hierarchical Dataset for Surgical Vision-Language Representation Learning

Alejandra Perez, Chinedu Nwoye, Ramtin Raji Kermani et al.

Vision-language pre-training (VLP) offers unique advantages for surgery by aligning language with surgical videos, enabling workflow understanding and transfer across tasks without relying on expert-labeled datasets. However, progress in surgical VLP remains constrained by the limited scale, procedural diversity, semantic quality, and hierarchical structure of existing datasets. In this work, we present SurgLaVi, the largest and most diverse surgical vision-language dataset to date, comprising nearly 240k clip-caption pairs from more than 200 procedures, and comprising hierarchical levels at phase-, step-, and task-level. At the core of SurgLaVi lies a fully automated pipeline that systematically generates fine-grained transcriptions of surgical videos and segments them into coherent procedural units. To ensure high-quality annotations, it applies dual-modality filtering to remove irrelevant and noisy samples. Within this framework, the resulting captions are enriched with contextual detail, producing annotations that are both semantically rich and easy to interpret. To ensure accessibility, we release SurgLaVi-\b{eta}, an open-source derivative of 113k clip-caption pairs constructed entirely from public data, which is over four times larger than existing surgical VLP datasets. To demonstrate the value of SurgLaVi datasets, we introduce SurgCLIP, a CLIP-style video-text contrastive framework with dual encoders, as a representative base model. SurgCLIP achieves consistent improvements across phase, step, action, and tool recognition, surpassing prior state-of-the-art methods, often by large margins. These results validate that large-scale, semantically rich, and hierarchically structured datasets directly translate into stronger and more generalizable representations, establishing SurgLaVi as a key resource for developing surgical foundation models.

CVDec 31, 2023
SAR-RARP50: Segmentation of surgical instrumentation and Action Recognition on Robot-Assisted Radical Prostatectomy Challenge

Dimitrios Psychogyios, Emanuele Colleoni, Beatrice Van Amsterdam et al.

Surgical tool segmentation and action recognition are fundamental building blocks in many computer-assisted intervention applications, ranging from surgical skills assessment to decision support systems. Nowadays, learning-based action recognition and segmentation approaches outperform classical methods, relying, however, on large, annotated datasets. Furthermore, action recognition and tool segmentation algorithms are often trained and make predictions in isolation from each other, without exploiting potential cross-task relationships. With the EndoVis 2022 SAR-RARP50 challenge, we release the first multimodal, publicly available, in-vivo, dataset for surgical action recognition and semantic instrumentation segmentation, containing 50 suturing video segments of Robotic Assisted Radical Prostatectomy (RARP). The aim of the challenge is twofold. First, to enable researchers to leverage the scale of the provided dataset and develop robust and highly accurate single-task action recognition and tool segmentation approaches in the surgical domain. Second, to further explore the potential of multitask-based learning approaches and determine their comparative advantage against their single-task counterparts. A total of 12 teams participated in the challenge, contributing 7 action recognition methods, 9 instrument segmentation techniques, and 4 multitask approaches that integrated both action recognition and instrument segmentation. The complete SAR-RARP50 dataset is available at: https://rdr.ucl.ac.uk/projects/SARRARP50_Segmentation_of_surgical_instrumentation_and_Action_Recognition_on_Robot-Assisted_Radical_Prostatectomy_Challenge/191091

CVMar 6
SUREON: A Benchmark and Vision-Language-Model for Surgical Reasoning

Alejandra Perez, Anita Rau, Lee White et al.

Surgeons don't just see -- they interpret. When an expert observes a surgical scene, they understand not only what instrument is being used, but why it was chosen, what risk it poses, and what comes next. Current surgical AI cannot answer such questions, largely because training data that explicitly encodes surgical reasoning is immensely difficult to annotate at scale. Yet surgical video lectures already contain exactly this -- explanations of intent, rationale, and anticipation, narrated by experts for the purpose of teaching. Though inherently noisy and unstructured, these narrations encode the reasoning that surgical AI currently lacks. We introduce SUREON, a large-scale video QA dataset that systematically harvests this training signal from surgical academic videos. SUREON defines 12 question categories covering safety assessment, decision rationale, and forecasting, and uses a multi-agent pipeline to extract and structure supervision at scale. Across 134.7K clips and 170 procedure types, SUREON yields 206.8k QA pairs and an expert-validated benchmark of 354 examples. To evaluate the extent to which this supervision translates to surgical reasoning ability, we introduce two models: SureonVLM, a vision-language model adapted through supervised fine-tuning, and SureonVLM-R1, a reasoning model trained with Group Relative Policy Optimization. Both models can answer complex questions about surgery and substantially outperform larger general-domain models, exceeding 84% accuracy on the SUREON benchmark while outperforming general-domain models on standard surgical perception tasks. Qualitative analysis of SureonVLM-R1 reveals explicit reasoning behavior, such as inferring operative intent from visual context.

CVApr 17, 2025
Privacy-Preserving Operating Room Workflow Analysis using Digital Twins

Alejandra Perez, Han Zhang, Yu-Chun Ku et al.

The operating room (OR) is a complex environment where optimizing workflows is critical to reduce costs and improve patient outcomes. While computer vision approaches for automatic recognition of perioperative events can identify bottlenecks for OR optimization, privacy concerns limit the use of OR videos for automated event detection. We propose a two-stage pipeline for privacy-preserving OR video analysis and event detection. First, we leverage vision foundation models for depth estimation and semantic segmentation to generate de-identified Digital Twins (DT) of the OR from conventional RGB videos. Second, we employ the SafeOR model, a fused two-stream approach that processes segmentation masks and depth maps for OR event detection. Evaluation on an internal dataset of 38 simulated surgical trials with five event classes shows that our DT-based approach achieves performance on par with -- and sometimes better than -- raw RGB video-based models for OR event detection. Digital Twins enable privacy-preserving OR workflow analysis, facilitating the sharing of de-identified data across institutions and potentially enhancing model generalizability by mitigating domain-specific appearance differences.