Zi Yang

Zi Yang, Samridhi Choudhary, Siegfried Kunzmann et al.

Fine-tuned transformer models have shown superior performances in many natural language tasks. However, the large model size prohibits deploying high-performance transformer models on resource-constrained devices. This paper proposes a quantization-aware tensor-compressed training approach to reduce the model size, arithmetic operations, and ultimately runtime latency of transformer-based models. We compress the embedding and linear layers of transformers into small low-rank tensor cores, which significantly reduces model parameters. A quantization-aware training with learnable scale factors is used to further obtain low-precision representations of the tensor-compressed models. The developed approach can be used for both end-to-end training and distillation-based training. To improve the convergence, a layer-by-layer distillation is applied to distill a quantized and tensor-compressed student model from a pre-trained transformer. The performance is demonstrated in two natural language understanding tasks, showing up to $63\times$ compression ratio, little accuracy loss and remarkable inference and training speedup.

Mahdieh Kazemimoghadam, Zi Yang, Lin Ma et al.

Deep learning (DL) models for medical image segmentation are highly influenced by intensity variations of input images and lack generalization due to primarily utilizing pixels' intensity information for inference. Acquiring sufficient training data is another challenge limiting models' applications. We proposed to leverage the consistency of organs' anatomical shape and position information in medical images. We introduced a framework leveraging recurring anatomical patterns through global binary masks for organ segmentation. Two scenarios were studied.1) Global binary masks were the only model's (i.e. U-Net) input, forcing exclusively encoding organs' position and shape information for segmentation/localization.2) Global binary masks were incorporated as an additional channel functioning as position/shape clues to mitigate training data scarcity. Two datasets of the brain and heart CT images with their ground-truth were split into (26:10:10) and (12:3:5) for training, validation, and test respectively. Training exclusively on global binary masks led to Dice scores of 0.77(0.06) and 0.85(0.04), with the average Euclidian distance of 3.12(1.43)mm and 2.5(0.93)mm relative to the center of mass of the ground truth for the brain and heart structures respectively. The outcomes indicate that a surprising degree of position and shape information is encoded through global binary masks. Incorporating global binary masks led to significantly higher accuracy relative to the model trained on only CT images in small subsets of training data; the performance improved by 4.3-125.3% and 1.3-48.1% for 1-8 training cases of the brain and heart datasets respectively. The findings imply the advantages of utilizing global binary masks for building generalizable models and to compensate for training data scarcity.

Zi Yang, Haojin Yang, Soumajit Majumder et al.

Previous studies have demonstrated that not each sample in a dataset is of equal importance during training. Data pruning aims to remove less important or informative samples while still achieving comparable results as training on the original (untruncated) dataset, thereby reducing storage and training costs. However, the majority of data pruning methods are applied to image classification tasks. To our knowledge, this work is the first to explore the feasibility of these pruning methods applied to object re-identification (ReID) tasks, while also presenting a more comprehensive data pruning approach. By fully leveraging the logit history during training, our approach offers a more accurate and comprehensive metric for quantifying sample importance, as well as correcting mislabeled samples and recognizing outliers. Furthermore, our approach is highly efficient, reducing the cost of importance score estimation by 10 times compared to existing methods. Our approach is a plug-and-play, architecture-agnostic framework that can eliminate/reduce 35%, 30%, and 5% of samples/training time on the VeRi, MSMT17 and Market1501 datasets, respectively, with negligible loss in accuracy (< 0.1%). The lists of important, mislabeled, and outlier samples from these ReID datasets are available at https://github.com/Zi-Y/data-pruning-reid.

Zi Yang

We argue that there are two major distinct capabilities in long context understanding: retrieval and holistic understanding. Understanding and further improving LLMs' long context capabilities would not be possible without knowing the tasks' focus categories. We aim to automatically identify retrieval focused and holistic understanding focused problems from suites of benchmarks and quantitatively measure the difficulty within each focus. In this paper, we present the Dolce framework, which parameterizes each problem by $λ$ (complexity) and $k$ (redundancy) and assigns to one of five predefined focus categories. We propose to sample short contexts from the full context and estimate the probability an LLM solves the problem using the sampled spans. To find the $λ$ and $k$ for each problem, we further propose a mixture model of a non-parametric background noise component and a parametric/non-parametric hybrid oracle component, where we derive the probability functions parameterized by $λ$ and $k$ for both the correct-or-wrong (COW) scenario and the partial-point-in-grading (PIG) scenario. Our proposed methods can identify 0% to 67% of the problems are retrieval focused and 0% to 90% of the problems are holistic understanding focused across 44 existing long context evaluation tasks.

Zi Yang, Nan Hua

As LLMs have become capable of processing more complex types of inputs, researchers have recently studied how to efficiently and affordably process possibly arbitrarily long sequences. One effective approach is to use a FIFO memory to store keys and values of an attention sublayer from past chunks to allow subsequent queries to attend. However, this approach requires a large memory and/or takes into the consideration the specific LM architecture. Moreover, due to the causal nature between the key-values in prior context and the queries at present, this approach cannot be extended to bidirectional attention such as in an encoder-decoder or PrefixLM decoder-only architecture. In this paper, we propose to use eviction policies, such as LRA and LFA, to reduce the memory size and adapt to various architectures, and we also propose the Attendre layer, a wait-to-attend mechanism by retrieving the key-value memory (K/V memory) with evicted queries in the query memory (Q memory). As a first step, we evaluate this method in the context length extension setup using the TriviaQA reading comprehension task, and show the effectiveness of the approach.

Zezhang Yang, Zitong Yu, Nuri Choi et al.

Myocardial perfusion imaging (MPI) with single-photon emission computed tomography (SPECT) is a widely used and cost-effective diagnostic tool for coronary artery disease. However, the lengthy scanning time in this imaging procedure can cause patient discomfort, motion artifacts, and potentially inaccurate diagnoses due to misalignment between the SPECT scans and the CT-scans which are acquired for attenuation compensation. Reducing projection angles is a potential way to shorten scanning time, but this can adversely impact the quality of the reconstructed images. To address this issue, we propose a detection-task-specific deep-learning method for sparse-view MPI SPECT images. This method integrates an observer loss term that penalizes the loss of anthropomorphic channel features with the goal of improving performance in perfusion defect-detection task. We observed that, on the task of detecting myocardial perfusion defects, the proposed method yielded an area under the receiver operating characteristic (ROC) curve (AUC) significantly larger than the sparse-view protocol. Further, the proposed method was observed to be able to restore the structure of the left ventricle wall, demonstrating ability to overcome sparse-sampling artifacts. Our preliminary results motivate further evaluations of the method.

Zi Lin, Jeremiah Zhe Liu, Zi Yang et al.

Traditional (unstructured) pruning methods for a Transformer model focus on regularizing the individual weights by penalizing them toward zero. In this work, we explore spectral-normalized identity priors (SNIP), a structured pruning approach that penalizes an entire residual module in a Transformer model toward an identity mapping. Our method identifies and discards unimportant non-linear mappings in the residual connections by applying a thresholding operator on the function norm. It is applicable to any structured module, including a single attention head, an entire attention block, or a feed-forward subnetwork. Furthermore, we introduce spectral normalization to stabilize the distribution of the post-activation values of the Transformer layers, further improving the pruning effectiveness of the proposed methodology. We conduct experiments with BERT on 5 GLUE benchmark tasks to demonstrate that SNIP achieves effective pruning results while maintaining comparable performance. Specifically, we improve the performance over the state-of-the-art by 0.5 to 1.0% on average at 50% compression ratio.

Erlei Zhang, Zi Yang, Stephen Seiler et al.

Breast ultrasound (US) is an effective imaging modality for breast cancer detec-tion and diagnosis. The structural characteristics of breast lesion play an im-portant role in Computer-Aided Diagnosis (CAD). In this paper, a novel struc-ture-aware triplet path networks (SATPN) was designed to integrate classifica-tion and two image reconstruction tasks to achieve accurate diagnosis on US im-ages with small training dataset. Specifically, we enhance clinically-approved breast lesion structure characteristics though converting original breast US imag-es to BIRADS-oriented feature maps (BFMs) with a distance-transformation coupled Gaussian filter. Then, the converted BFMs were used as the inputs of SATPN, which performed lesion classification task and two unsupervised stacked convolutional Auto-Encoder (SCAE) networks for benign and malignant image reconstruction tasks, independently. We trained the SATPN with an alter-native learning strategy by balancing image reconstruction error and classification label prediction error. At the test stage, the lesion label was determined by the weighted voting with reconstruction error and label prediction error. We com-pared the performance of the SATPN with TPN using original image as input and our previous developed semi-supervised deep learning methods using BFMs as inputs. Experimental results on two breast US datasets showed that SATPN ranked the best among the three networks, with classification accuracy around 93.5%. These findings indicated that SATPN is promising for effective breast US lesion CAD using small datasets.