Tianyi Chen

Tianyi Chen, Zhi-Qin John Xu

Neural networks have been extensively applied to a variety of tasks, achieving astounding results. Applying neural networks in the scientific field is an important research direction that is gaining increasing attention. In scientific applications, the scale of neural networks is generally moderate-size, mainly to ensure the speed of inference during application. Additionally, comparing neural networks to traditional algorithms in scientific applications is inevitable. These applications often require rapid computations, making the reduction of neural network sizes increasingly important. Existing work has found that the powerful capabilities of neural networks are primarily due to their non-linearity. Theoretical work has discovered that under strong non-linearity, neurons in the same layer tend to behave similarly, a phenomenon known as condensation. Condensation offers an opportunity to reduce the scale of neural networks to a smaller subnetwork with similar performance. In this article, we propose a condensation reduction algorithm to verify the feasibility of this idea in practical problems. Our reduction method can currently be applied to both fully connected networks and convolutional networks, achieving positive results. In complex combustion acceleration tasks, we reduced the size of the neural network to 41.7% of its original scale while maintaining prediction accuracy. In the CIFAR10 image classification task, we reduced the network size to 11.5% of the original scale, still maintaining a satisfactory validation accuracy. Our method can be applied to most trained neural networks, reducing computational pressure and improving inference speed.

Tianyi Chen, Mingcheng Zhu, Zhiyao Luo et al.

Electronic Health Records (EHRs) enable deep learning for clinical predictions, but the optimal method for representing patient data remains unclear due to inconsistent evaluation practices. We present the first systematic benchmark to compare EHR representation methods, including multivariate time-series, event streams, and textual event streams for LLMs. This benchmark standardises data curation and evaluation across two distinct clinical settings: the MIMIC-IV dataset for ICU tasks (mortality, phenotyping) and the EHRSHOT dataset for longitudinal care (30-day readmission, 1-year pancreatic cancer). For each paradigm, we evaluate appropriate modelling families--including Transformers, MLP, LSTMs and Retain for time-series, CLMBR and count-based models for event streams, 8-20B LLMs for textual streams--and analyse the impact of feature pruning based on data missingness. Our experiments reveal that event stream models consistently deliver the strongest performance. Pre-trained models like CLMBR are highly sample-efficient in few-shot settings, though simpler count-based models can be competitive given sufficient data. Furthermore, we find that feature selection strategies must be adapted to the clinical setting: pruning sparse features improves ICU predictions, while retaining them is critical for longitudinal tasks. Our results, enabled by a unified and reproducible pipeline, provide practical guidance for selecting EHR representations based on the clinical context and data regime.

Tianyi Chen, Pengxiao Lin, Zhiwei Wang et al.

State Space Models (SSMs) have emerged as promising alternatives to attention mechanisms, with the Mamba architecture demonstrating impressive performance and linear complexity for processing long sequences. However, the fundamental differences between Mamba and Transformer architectures remain incompletely understood. In this work, we use carefully designed synthetic tasks to reveal Mamba's inherent limitations. Through experiments, we identify that Mamba's nonlinear convolution introduces an asymmetry bias that significantly impairs its ability to recognize symmetrical patterns and relationships. Using composite function and inverse sequence matching tasks, we demonstrate that Mamba strongly favors compositional solutions over symmetrical ones and struggles with tasks requiring the matching of reversed sequences. We show these limitations stem not from the SSM module itself but from the nonlinear convolution preceding it, which fuses token information asymmetrically. These insights provide a new understanding of Mamba's constraints and suggest concrete architectural improvements for future sequence models.

Zhaoxian Wu, Tayfun Gokmen, Malte J. Rasch et al.

Given the high economic and environmental costs of using large vision or language models, analog in-memory accelerators present a promising solution for energy-efficient AI. While inference on analog accelerators has been studied recently, the training perspective is underexplored. Recent studies have shown that the "workhorse" of digital AI training - stochastic gradient descent (SGD) algorithm converges inexactly when applied to model training on non-ideal devices. This paper puts forth a theoretical foundation for gradient-based training on analog devices. We begin by characterizing the non-convergent issue of SGD, which is caused by the asymmetric updates on the analog devices. We then provide a lower bound of the asymptotic error to show that there is a fundamental performance limit of SGD-based analog training rather than an artifact of our analysis. To address this issue, we study a heuristic analog algorithm called Tiki-Taka that has recently exhibited superior empirical performance compared to SGD and rigorously show its ability to exactly converge to a critical point and hence eliminates the asymptotic error. The simulations verify the correctness of the analyses.