Sen Jia

Sen Jia, Yifan Wang

Hyperspectral images (HSI) not only have a broad macroscopic field of view but also contain rich spectral information, and the types of surface objects can be identified through spectral information, which is one of the main applications in hyperspectral image related research.In recent years, more and more deep learning methods have been proposed, among which convolutional neural networks (CNN) are the most influential. However, CNN-based methods are difficult to capture long-range dependencies, and also require a large amount of labeled data for model training.Besides, most of the self-supervised training methods in the field of HSI classification are based on the reconstruction of input samples, and it is difficult to achieve effective use of unlabeled samples. To address the shortcomings of CNN networks, we propose a noval multi-scale convolutional embedding module for HSI to realize effective extraction of spatial-spectral information, which can be better combined with Transformer network.In order to make more efficient use of unlabeled data, we propose a new self-supervised pretask. Similar to Mask autoencoder, but our pre-training method only masks the corresponding token of the central pixel in the encoder, and inputs the remaining token into the decoder to reconstruct the spectral information of the central pixel.Such a pretask can better model the relationship between the central feature and the domain feature, and obtain more stable training results.

Juan Zou, Cheng Li, Sen Jia et al.

Lately, deep learning has been extensively investigated for accelerating dynamic magnetic resonance (MR) imaging, with encouraging progresses achieved. However, without fully sampled reference data for training, current approaches may have limited abilities in recovering fine details or structures. To address this challenge, this paper proposes a self-supervised collaborative learning framework (SelfCoLearn) for accurate dynamic MR image reconstruction from undersampled k-space data. The proposed framework is equipped with three important components, namely, dual-network collaborative learning, reunderampling data augmentation and a specially designed co-training loss. The framework is flexible to be integrated with both data-driven networks and model-based iterative un-rolled networks. Our method has been evaluated on in-vivo dataset and compared it to four state-of-the-art methods. Results show that our method possesses strong capabilities in capturing essential and inherent representations for direct reconstructions from the undersampled k-space data and thus enables high-quality and fast dynamic MR imaging.

Zhuo-Xu Cui, Chentao Cao, Yue Wang et al.

Diffusion models have emerged as a leading methodology for image generation and have proven successful in the realm of magnetic resonance imaging (MRI) reconstruction. However, existing reconstruction methods based on diffusion models are primarily formulated in the image domain, making the reconstruction quality susceptible to inaccuracies in coil sensitivity maps (CSMs). k-space interpolation methods can effectively address this issue but conventional diffusion models are not readily applicable in k-space interpolation. To overcome this challenge, we introduce a novel approach called SPIRiT-Diffusion, which is a diffusion model for k-space interpolation inspired by the iterative self-consistent SPIRiT method. Specifically, we utilize the iterative solver of the self-consistent term (i.e., k-space physical prior) in SPIRiT to formulate a novel stochastic differential equation (SDE) governing the diffusion process. Subsequently, k-space data can be interpolated by executing the diffusion process. This innovative approach highlights the optimization model's role in designing the SDE in diffusion models, enabling the diffusion process to align closely with the physics inherent in the optimization model, a concept referred to as model-driven diffusion. We evaluated the proposed SPIRiT-Diffusion method using a 3D joint intracranial and carotid vessel wall imaging dataset. The results convincingly demonstrate its superiority over image-domain reconstruction methods, achieving high reconstruction quality even at a substantial acceleration rate of 10.

Zhuo-Xu Cui, Congcong Liu, Xiaohong Fan et al.

In the field of parallel imaging (PI), alongside image-domain regularization methods, substantial research has been dedicated to exploring $k$-space interpolation. However, the interpretability of these methods remains an unresolved issue. Furthermore, these approaches currently face acceleration limitations that are comparable to those experienced by image-domain methods. In order to enhance interpretability and overcome the acceleration limitations, this paper introduces an interpretable framework that unifies both $k$-space interpolation techniques and image-domain methods, grounded in the physical principles of heat diffusion equations. Building upon this foundational framework, a novel $k$-space interpolation method is proposed. Specifically, we model the process of high-frequency information attenuation in $k$-space as a heat diffusion equation, while the effort to reconstruct high-frequency information from low-frequency regions can be conceptualized as a reverse heat equation. However, solving the reverse heat equation poses a challenging inverse problem. To tackle this challenge, we modify the heat equation to align with the principles of magnetic resonance PI physics and employ the score-based generative method to precisely execute the modified reverse heat diffusion. Finally, experimental validation conducted on publicly available datasets demonstrates the superiority of the proposed approach over traditional $k$-space interpolation methods, deep learning-based $k$-space interpolation methods, and conventional diffusion models in terms of reconstruction accuracy, particularly in high-frequency regions.

Chentao Cao, Zhuo-Xu Cui, Jing Cheng et al.

Diffusion model is the most advanced method in image generation and has been successfully applied to MRI reconstruction. However, the existing methods do not consider the characteristics of multi-coil acquisition of MRI data. Therefore, we give a new diffusion model, called SPIRiT-Diffusion, based on the SPIRiT iterative reconstruction algorithm. Specifically, SPIRiT-Diffusion characterizes the prior distribution of coil-by-coil images by score matching and characterizes the k-space redundant prior between coils based on self-consistency. With sufficient prior constraint utilized, we achieve superior reconstruction results on the joint Intracranial and Carotid Vessel Wall imaging dataset.

Zhuo-Xu Cui, Sen Jia, Qingyong Zhu et al.

Recently, untrained neural networks (UNNs) have shown satisfactory performances for MR image reconstruction on random sampling trajectories without using additional full-sampled training data. However, the existing UNN-based approach does not fully use the MR image physical priors, resulting in poor performance in some common scenarios (e.g., partial Fourier, regular sampling, etc.) and the lack of theoretical guarantees for reconstruction accuracy. To bridge this gap, we propose a safeguarded k-space interpolation method for MRI using a specially designed UNN with a tripled architecture driven by three physical priors of the MR images (or k-space data), including sparsity, coil sensitivity smoothness, and phase smoothness. We also prove that the proposed method guarantees tight bounds for interpolated k-space data accuracy. Finally, ablation experiments show that the proposed method can more accurately characterize the physical priors of MR images than existing traditional methods. Additionally, under a series of commonly used sampling trajectories, experiments also show that the proposed method consistently outperforms traditional parallel imaging methods and existing UNNs, and even outperforms the state-of-the-art supervised-trained k-space deep learning methods in some cases.

Zhuo-Xu Cui, Jing Cheng, Qingyong Zhu et al.

Recently, model-driven deep learning unrolls a certain iterative algorithm of a regularization model into a cascade network by replacing the first-order information (i.e., (sub)gradient or proximal operator) of the regularizer with a network module, which appears more explainable and predictable compared to common data-driven networks. Conversely, in theory, there is not necessarily such a functional regularizer whose first-order information matches the replaced network module, which means the network output may not be covered by the original regularization model. Moreover, up to now, there is also no theory to guarantee the global convergence and robustness (regularity) of unrolled networks under realistic assumptions. To bridge this gap, this paper propose to present a safeguarded methodology on network unrolling. Specifically, focusing on accelerated MRI, we unroll a zeroth-order algorithm, of which the network module represents the regularizer itself, so that the network output can be still covered by the regularization model. Furthermore, inspired by the ideal of deep equilibrium models, before backpropagating, we carry out the unrolled iterative network to converge to a fixed point to ensure the convergence. In case the measurement data contains noise, we prove that the proposed network is robust against noisy interference. Finally, numerical experiments show that the proposed network consistently outperforms the state-of-the-art MRI reconstruction methods including traditional regularization methods and other deep learning methods.

Md Amirul Islam, Matthew Kowal, Sen Jia et al.

Existing weakly or semi-supervised semantic segmentation methods utilize image or box-level supervision to generate pseudo-labels for weakly labeled images. However, due to the lack of strong supervision, the generated pseudo-labels are often noisy near the object boundaries, which severely impacts the network's ability to learn strong representations. To address this problem, we present a novel framework that generates pseudo-labels for training images, which are then used to train a segmentation model. To generate pseudo-labels, we combine information from: (i) a class agnostic objectness network that learns to recognize object-like regions, and (ii) either image-level or bounding box annotations. We show the efficacy of our approach by demonstrating how the objectness network can naturally be leveraged to generate object-like regions for unseen categories. We then propose an end-to-end multi-task learning strategy, that jointly learns to segment semantics and objectness using the generated pseudo-labels. Extensive experiments demonstrate the high quality of our generated pseudo-labels and effectiveness of the proposed framework in a variety of domains. Our approach achieves better or competitive performance compared to existing weakly-supervised and semi-supervised methods.

Md Amirul Islam, Matthew Kowal, Sen Jia et al.

In this paper, we challenge the common assumption that collapsing the spatial dimensions of a 3D (spatial-channel) tensor in a convolutional neural network (CNN) into a vector via global pooling removes all spatial information. Specifically, we demonstrate that positional information is encoded based on the ordering of the channel dimensions, while semantic information is largely not. Following this demonstration, we show the real world impact of these findings by applying them to two applications. First, we propose a simple yet effective data augmentation strategy and loss function which improves the translation invariance of a CNN's output. Second, we propose a method to efficiently determine which channels in the latent representation are responsible for (i) encoding overall position information or (ii) region-specific positions. We first show that semantic segmentation has a significant reliance on the overall position channels to make predictions. We then show for the first time that it is possible to perform a `region-specific' attack, and degrade a network's performance in a particular part of the input. We believe our findings and demonstrated applications will benefit research areas concerned with understanding the characteristics of CNNs.

Meng Xu, Zhihao Wang, Jiasong Zhu et al.

Image super-resolution (SR) methods can generate remote sensing images with high spatial resolution without increasing the cost, thereby providing a feasible way to acquire high-resolution remote sensing images, which are difficult to obtain due to the high cost of acquisition equipment and complex weather. Clearly, image super-resolution is a severe ill-posed problem. Fortunately, with the development of deep learning, the powerful fitting ability of deep neural networks has solved this problem to some extent. In this paper, we propose a network based on the generative adversarial network (GAN) to generate high resolution remote sensing images, named the multi-attention generative adversarial network (MA-GAN). We first designed a GAN-based framework for the image SR task. The core to accomplishing the SR task is the image generator with post-upsampling that we designed. The main body of the generator contains two blocks; one is the pyramidal convolution in the residual-dense block (PCRDB), and the other is the attention-based upsample (AUP) block. The attentioned pyramidal convolution (AttPConv) in the PCRDB block is a module that combines multi-scale convolution and channel attention to automatically learn and adjust the scaling of the residuals for better results. The AUP block is a module that combines pixel attention (PA) to perform arbitrary multiples of upsampling. These two blocks work together to help generate better quality images. For the loss function, we design a loss function based on pixel loss and introduce both adversarial loss and feature loss to guide the generator learning. We have compared our method with several state-of-the-art methods on a remote sensing scene image dataset, and the experimental results consistently demonstrate the effectiveness of the proposed MA-GAN.