Wolfgang Mayer

Shuting Yang, Zehui Liu, Wolfgang Mayer

Recent developments in large language models (LLMs) have led to significant improvements in intelligent dialogue systems'ability to handle complex inquiries. However, current LLMs still exhibit limitations in specialized domain knowledge, particularly in technical fields such as agriculture. To address this problem, we propose ShizishanGPT, an intelligent question answering system for agriculture based on the Retrieval Augmented Generation (RAG) framework and agent architecture. ShizishanGPT consists of five key modules: including a generic GPT-4 based module for answering general questions; a search engine module that compensates for the problem that the large language model's own knowledge cannot be updated in a timely manner; an agricultural knowledge graph module for providing domain facts; a retrieval module which uses RAG to supplement domain knowledge; and an agricultural agent module, which invokes specialized models for crop phenotype prediction, gene expression analysis, and so on. We evaluated the ShizishanGPT using a dataset containing 100 agricultural questions specially designed for this study. The experimental results show that the tool significantly outperforms general LLMs as it provides more accurate and detailed answers due to its modular design and integration of different domain knowledge sources. Our source code, dataset, and model weights are publicly available at https://github.com/Zaiwen/CropGPT.

Jiakang Xu, Wolfgang Mayer, HongYu Zhang et al.

A critical step in sharing semantic content online is to map the structural data source to a public domain ontology. This problem is denoted as the Relational-To-Ontology Mapping Problem (Rel2Onto). A huge effort and expertise are required for manually modeling the semantics of data. Therefore, an automatic approach for learning the semantics of a data source is desirable. Most of the existing work studies the semantic annotation of source attributes. However, although critical, the research for automatically inferring the relationships between attributes is very limited. In this paper, we propose a novel method for semantically annotating structured data sources using machine learning, graph matching and modified frequent subgraph mining to amend the candidate model. In our work, Knowledge graph is used as prior knowledge. Our evaluation shows that our approach outperforms two state-of-the-art solutions in tricky cases where only a few semantic models are known.

Naeem Paeedeh, Mahardhika Pratama, Imam Mustafa Kamal et al.

Despite the progress in cross-domain few-shot learning, a model pre-trained with DINO combined with a prototypical classifier outperforms the latest SOTA methods. A crucial limitation that needs to be overcome is that updating too many parameters of the transformers leads to overfitting due to the scarcity of labeled samples. To address this challenge, we propose a new concept, coalescent projection, as an effective successor to soft prompts. Additionally, we propose a novel pseudo-class generation method, combined with self-supervised transformations, that relies solely on the base domain to prepare the network to encounter unseen samples from different domains. The proposed method exhibits its effectiveness in comprehensive experiments on the extreme domain-shift problem of the BSCD-FSL benchmark. Our code is published at \href{https://github.com/Naeem-Paeedeh/CPLSR}{https://github.com/Naeem-Paeedeh/CPLSR}.

Naeem Paeedeh, Mahardhika Pratama, Sunu Wibirama et al.

Few-Shot Class-Incremental Learning presents an extension of the Class Incremental Learning problem where a model is faced with the problem of data scarcity while addressing the catastrophic forgetting problem. This problem remains an open problem because all recent works are built upon the convolutional neural networks performing sub-optimally compared to the transformer approaches. Our paper presents Robust Transformer Approach built upon the Compact Convolution Transformer. The issue of overfitting due to few samples is overcome with the notion of the stochastic classifier, where the classifier's weights are sampled from a distribution with mean and variance vectors, thus increasing the likelihood of correct classifications, and the batch-norm layer to stabilize the training process. The issue of CF is dealt with the idea of delta parameters, small task-specific trainable parameters while keeping the backbone networks frozen. A non-parametric approach is developed to infer the delta parameters for the model's predictions. The prototype rectification approach is applied to avoid biased prototype calculations due to the issue of data scarcity. The advantage of ROBUSTA is demonstrated through a series of experiments in the benchmark problems where it is capable of outperforming prior arts with big margins without any data augmentation protocols.

Zheng Fang, Wolfgang Mayer, Zeyu Zhang et al.

Tool learning is increasingly important for large language models (LLMs) to effectively coordinate and utilize a diverse set of tools in order to solve complex real-world tasks. By selecting and integrating appropriate tools, LLMs extend their capabilities beyond pure language understanding to perform specialized functions. However, existing methods for tool selection often focus on limited tool sets and struggle to generalize to novel tools encountered in practical deployments. To address these challenges, we introduce a comprehensive dataset spanning 7 domains, containing 155 tools and 9,377 question-answer pairs, which simulates realistic integration scenarios. Additionally, we propose MetaToolAgent (MTA), a meta-learning approach designed to improve cross-tool generalization. Experimental results show that MTA significantly outperforms baseline methods on unseen tools, demonstrating its promise for building flexible and scalable systems that require dynamic tool coordination.

Naeem Paeedeh, Mahardhika Pratama, Weiping Ding et al.

Domain Incremental Learning (DIL) is a continual learning sub-branch that aims to address never-ending arrivals of new domains without catastrophic forgetting problems. Despite the advent of parameter-efficient fine-tuning (PEFT) approaches, existing works create task-specific LoRAs overlooking shared knowledge across tasks. Inaccurate selection of task-specific LORAs during inference results in significant drops in accuracy, while existing works rely on linear or prototype-based classifiers, which have suboptimal generalization powers. Our paper proposes continual knowledge consolidation low rank adaptation (CONEC-LoRA) addressing the DIL problems. CONEC-LoRA is developed from consolidations between task-shared LORA to extract common knowledge and task-specific LORA to embrace domain-specific knowledge. Unlike existing approaches, CONEC-LoRA integrates the concept of a stochastic classifier whose parameters are sampled from a distribution, thus enhancing the likelihood of correct classifications. Last but not least, an auxiliary network is deployed to optimally predict the task-specific LoRAs for inferences and implements the concept of a different-depth network structure in which every layer is connected with a local classifier to take advantage of intermediate representations. This module integrates the ball-generator loss and transformation module to address the synthetic sample bias problem. Our rigorous experiments demonstrate the advantage of CONEC-LoRA over prior arts in 4 popular benchmark problems with over 5% margins.

Naeem Paeedeh, Mahardhika Pratama, Muhammad Anwar Ma'sum et al.

Most few-shot learning works rely on the same domain assumption between the base and the target tasks, hindering their practical applications. This paper proposes an adaptive transformer network (ADAPTER), a simple but effective solution for cross-domain few-shot learning where there exist large domain shifts between the base task and the target task. ADAPTER is built upon the idea of bidirectional cross-attention to learn transferable features between the two domains. The proposed architecture is trained with DINO to produce diverse, and less biased features to avoid the supervision collapse problem. Furthermore, the label smoothing approach is proposed to improve the consistency and reliability of the predictions by also considering the predicted labels of the close samples in the embedding space. The performance of ADAPTER is rigorously evaluated in the BSCD-FSL benchmarks in which it outperforms prior arts with significant margins.

Zhalama, Jiji Zhang, Frederick Eberhardt et al.

In recent years the possibility of relaxing the so-called Faithfulness assumption in automated causal discovery has been investigated. The investigation showed (1) that the Faithfulness assumption can be weakened in various ways that in an important sense preserve its power, and (2) that weakening of Faithfulness may help to speed up methods based on Answer Set Programming. However, this line of work has so far only considered the discovery of causal models without latent variables. In this paper, we study weakenings of Faithfulness for constraint-based discovery of semi-Markovian causal models, which accommodate the possibility of latent variables, and show that both (1) and (2) remain the case in this more realistic setting.