Julia Dietlmeier

Grace Billingsley, Julia Dietlmeier, Vivek Narayanaswamy et al.

We propose an accurate and fast classification network for classification of brain tumors in MRI images that outperforms all lightweight methods investigated in terms of accuracy. We test our model on a challenging 2D T1-weighted CE-MRI dataset containing three types of brain tumors: Meningioma, Glioma and Pituitary. We introduce an l2-normalized spatial attention mechanism that acts as a regularizer against overfitting during training. We compare our results against the state-of-the-art on this dataset and show that by integrating l2-normalized spatial attention into a baseline network we achieve a performance gain of 1.79 percentage points. Even better accuracy can be attained by combining our model in an ensemble with the pretrained VGG16 at the expense of execution speed. Our code is publicly available at https://github.com/juliadietlmeier/MRI_image_classification

Ayush K. Rai, Tarun Krishna, Julia Dietlmeier et al.

The task of Generic Event Boundary Detection (GEBD) aims to detect moments in videos that are naturally perceived by humans as generic and taxonomy-free event boundaries. Modeling the dynamically evolving temporal and spatial changes in a video makes GEBD a difficult problem to solve. Existing approaches involve very complex and sophisticated pipelines in terms of architectural design choices, hence creating a need for more straightforward and simplified approaches. In this work, we address this issue by revisiting a simple and effective self-supervised method and augment it with a differentiable motion feature learning module to tackle the spatial and temporal diversities in the GEBD task. We perform extensive experiments on the challenging Kinetics-GEBD and TAPOS datasets to demonstrate the efficacy of the proposed approach compared to the other self-supervised state-of-the-art methods. We also show that this simple self-supervised approach learns motion features without any explicit motion-specific pretext task.

Francesco Chiumento, Julia Dietlmeier, Ronan P. Killeen et al.

Detecting amyloid-$β$ (A$β$) positivity is crucial for early diagnosis of Alzheimer's disease but typically requires PET imaging, which is costly, invasive, and not widely accessible, limiting its use for population-level screening. We address this gap by proposing a PET-guided knowledge distillation framework that enables A$β$ prediction from MRI alone, without requiring non-imaging clinical covariates or PET at inference. Our approach employs a BiomedCLIP-based teacher model that learns PET-MRI alignment via cross-modal attention and triplet contrastive learning with PET-informed (Centiloid-aware) online negative sampling. An MRI-only student then mimics the teacher via feature-level and logit-level distillation. Evaluated across four MRI contrasts (T1w, T2w, FLAIR, T2*) and two independent datasets, our approach demonstrates effective knowledge transfer (best AUC: 0.74 on OASIS-3, 0.68 on ADNI) while maintaining interpretability and eliminating the need for clinical variables. Saliency analysis confirms that predictions focus on anatomically relevant cortical regions, supporting the clinical viability of PET-free A$β$ screening. Code is available at https://github.com/FrancescoChiumento/pet-guided-mri-amyloid-detection.

Sidra Aleem, Fangyijie Wang, Mayug Maniparambil et al.

The Segment Anything Model (SAM) and CLIP are remarkable vision foundation models (VFMs). SAM, a prompt driven segmentation model, excels in segmentation tasks across diverse domains, while CLIP is renowned for its zero shot recognition capabilities. However, their unified potential has not yet been explored in medical image segmentation. To adapt SAM to medical imaging, existing methods primarily rely on tuning strategies that require extensive data or prior prompts tailored to the specific task, making it particularly challenging when only a limited number of data samples are available. This work presents an in depth exploration of integrating SAM and CLIP into a unified framework for medical image segmentation. Specifically, we propose a simple unified framework, SaLIP, for organ segmentation. Initially, SAM is used for part based segmentation within the image, followed by CLIP to retrieve the mask corresponding to the region of interest (ROI) from the pool of SAM generated masks. Finally, SAM is prompted by the retrieved ROI to segment a specific organ. Thus, SaLIP is training and fine tuning free and does not rely on domain expertise or labeled data for prompt engineering. Our method shows substantial enhancements in zero shot segmentation, showcasing notable improvements in DICE scores across diverse segmentation tasks like brain (63.46%), lung (50.11%), and fetal head (30.82%), when compared to un prompted SAM. Code and text prompts are available at: https://github.com/aleemsidra/SaLIP.

Sidra Aleem, Julia Dietlmeier, Eric Arazo et al.

Existing domain adaptation (DA) methods often involve pre-training on the source domain and fine-tuning on the target domain. For multi-target domain adaptation, having a dedicated/separate fine-tuned network for each target domain, that retain all the pre-trained model parameters, is prohibitively expensive. To address this limitation, we propose Convolutional Low-Rank Adaptation (ConvLoRA). ConvLoRA freezes pre-trained model weights, adds trainable low-rank decomposition matrices to convolutional layers, and backpropagates the gradient through these matrices thus greatly reducing the number of trainable parameters. To further boost adaptation, we utilize Adaptive Batch Normalization (AdaBN) which computes target-specific running statistics and use it along with ConvLoRA. Our method has fewer trainable parameters and performs better or on-par with large independent fine-tuned networks (with less than 0.9% trainable parameters of the total base model) when tested on the segmentation of Calgary-Campinas dataset containing brain MRI images. Our approach is simple, yet effective and can be applied to any deep learning-based architecture which uses convolutional and batch normalization layers. Code is available at: https://github.com/aleemsidra/ConvLoRA.

Anam Hashmi, Mayug Maniparambil, Julia Dietlmeier et al.

The emergence of large-scale pretrained foundation models has transformed computer vision, enabling strong performance across diverse downstream tasks. However, their potential for physics-based inverse problems, such as accelerated cardiac MRI reconstruction, remains largely underexplored. In this work, we investigate whether natural-domain foundation models can serve as effective image priors for accelerated cardiac MRI reconstruction, and compare the performance obtained against domain-specific counterparts such as BiomedCLIP. We propose an unrolled reconstruction framework that incorporates pretrained, frozen visual encoders, such as CLIP, DINOv2, and BiomedCLIP, within each cascade to guide the reconstruction process. Through extensive experiments, we show that while task-specific state-of-the-art reconstruction models such as E2E-VarNet achieve superior performance in standard in-distribution settings, foundation-model-based approaches remain competitive. More importantly, in challenging cross-domain scenarios, where models are trained on cardiac MRI and evaluated on anatomically distinct knee and brain datasets--foundation models exhibit improved robustness, particularly under high acceleration factors and limited low-frequency sampling. We further observe that natural-image-pretrained models, such as CLIP, learn highly transferable structural representations, while domain-specific pretraining (BiomedCLIP) provides modest additional gains in more ill-posed regimes. Overall, our results suggest that pretrained foundation models offer a promising source of transferable priors, enabling improved robustness and generalization in accelerated MRI reconstruction.

Julia Dietlmeier, Vayangi Ganepola, Oluwabukola G. Adegboro et al.

Directly inspired by findings in biological vision, high-dimensional hypercolumns are feature vectors built by concatenating multi-scale activations of convolutional neural networks for a single image pixel location. Together with powerful classifiers, they can be used for image segmentation i.e. pixel classification. However, in practice, there are only very few works dedicated to the use of hypercolumns. One reason is the computational complexity of processing concatenated dense hypercolumns that grows linearly with the size $N$ of the training set. In this work, we address this challenge by applying stratified subsampling to the VGG16 based hypercolumns. Furthermore, we investigate the performance of ensemble learning on sparse hypercolumns. Our experiments on a brain tumor dataset show that stacking and voting ensembles deliver competitive performance, but in the extreme low-shot case of $N \leq 20$, a simple Logistic Regression classifier is the most effective method. For 10% stratified subsampling rate, our best average Dice score is 0.66 for $N=20$. This is a statistically significant improvement of 24.53% over the standard multi-scale UNet baseline ($p$-value = $[3.07e-11]$, Wilcoxon signed-rank test), which is less effective due to overfitting.

Julia Dietlmeier, Oluwabukola Grace Adegboro, Vayangi Ganepola et al.

Vision-language models and their adaptations to image segmentation tasks present enormous potential for producing highly accurate and interpretable results. However, implementations based on CLIP and BiomedCLIP are still lagging behind more sophisticated architectures such as CRIS. In this work, instead of focusing on text prompt engineering as is the norm, we attempt to narrow this gap by showing how to ensemble vision-language segmentation models (VLSMs) with a low-complexity CNN. By doing so, we achieve a significant Dice score improvement of 6.3% on the BKAI polyp dataset using the ensembled BiomedCLIPSeg, while other datasets exhibit gains ranging from 1% to 6%. Furthermore, we provide initial results on additional four radiology and non-radiology datasets. We conclude that ensembling works differently across these datasets (from outperforming to underperforming the CRIS model), indicating a topic for future investigation by the community. The code is available at https://github.com/juliadietlmeier/VLSM-Ensemble.

Gerard Comas-Quiles, Carles Garcia-Cabrera, Julia Dietlmeier et al.

Unsupervised anomaly detection (UAD) presents a complementary alternative to supervised learning for brain tumor segmentation in magnetic resonance imaging (MRI), particularly when annotated datasets are limited, costly, or inconsistent. In this work, we propose a novel Multimodal Vision Transformer Autoencoder (MViT-AE) trained exclusively on healthy brain MRIs to detect and localize tumors via reconstruction-based error maps. This unsupervised paradigm enables segmentation without reliance on manual labels, addressing a key scalability bottleneck in neuroimaging workflows. Our method is evaluated in the BraTS-GoAT 2025 Lighthouse dataset, which includes various types of tumors such as gliomas, meningiomas, and pediatric brain tumors. To enhance performance, we introduce a multimodal early-late fusion strategy that leverages complementary information across multiple MRI sequences, and a post-processing pipeline that integrates the Segment Anything Model (SAM) to refine predicted tumor contours. Despite the known challenges of UAD, particularly in detecting small or non-enhancing lesions, our method achieves clinically meaningful tumor localization, with lesion-wise Dice Similarity Coefficient of 0.437 (Whole Tumor), 0.316 (Tumor Core), and 0.350 (Enhancing Tumor) on the test set, and an anomaly Detection Rate of 89.4% on the validation set. These findings highlight the potential of transformer-based unsupervised models to serve as scalable, label-efficient tools for neuro-oncological imaging.

Anam Hashmi, Julia Dietlmeier, Kathleen M. Curran et al.

Attention is a fundamental component of the human visual recognition system. The inclusion of attention in a convolutional neural network amplifies relevant visual features and suppresses the less important ones. Integrating attention mechanisms into convolutional neural networks enhances model performance and interpretability. Spatial and channel attention mechanisms have shown significant advantages across many downstream tasks in medical imaging. While existing attention modules have proven to be effective, their design often lacks a robust theoretical underpinning. In this study, we address this gap by proposing a non-linear attention architecture for cardiac MRI reconstruction and hypothesize that insights from ecological principles can guide the development of effective and efficient attention mechanisms. Specifically, we investigate a non-linear ecological difference equation that describes single-species population growth to devise a parameter-free attention module surpassing current state-of-the-art parameter-free methods.

Anam Hashmi, Julia Dietlmeier, Kathleen M. Curran et al.

Cine cardiac magnetic resonance (CMR) imaging is recognised as the benchmark modality for the comprehensive assessment of cardiac function. Nevertheless, the acquisition process of cine CMR is considered as an impediment due to its prolonged scanning time. One commonly used strategy to expedite the acquisition process is through k-space undersampling, though it comes with a drawback of introducing aliasing effects in the reconstructed image. Lately, deep learning-based methods have shown remarkable results over traditional approaches in rapidly achieving precise CMR reconstructed images. This study aims to explore the untapped potential of attention mechanisms incorporated with a deep learning model within the context of the CMR reconstruction problem. We are motivated by the fact that attention has proven beneficial in downstream tasks such as image classification and segmentation, but has not been systematically analysed in the context of CMR reconstruction. Our primary goal is to identify the strengths and potential limitations of attention algorithms when integrated with a convolutional backbone model such as a U-Net. To achieve this, we benchmark different state-of-the-art spatial and channel attention mechanisms on the CMRxRecon dataset and quantitatively evaluate the quality of reconstruction using objective metrics. Furthermore, inspired by the best performing attention mechanism, we propose a new, simple yet effective, attention pipeline specifically optimised for the task of cardiac image reconstruction that outperforms other state-of-the-art attention methods. The layer and model code will be made publicly available.

Julia Dietlmeier, Feiyan Hu, Frances Ryan et al.

In this paper we introduce an image-based person re-identification dataset collected across five non-overlapping camera views in the large and busy airport in Dublin, Ireland. Unlike all publicly available image-based datasets, our dataset contains timestamp information in addition to frame number, and camera and person IDs. Also our dataset has been fully anonymized to comply with modern data privacy regulations. We apply state-of-the-art person re-identification models to our dataset and show that by leveraging the available timestamp information we are able to achieve a significant gain of 37.43% in mAP and a gain of 30.22% in Rank1 accuracy. We also propose a Bayesian temporal re-ranking post-processing step, which further adds a 10.03% gain in mAP and 9.95% gain in Rank1 accuracy metrics. This work on combining visual and temporal information is not possible on other image-based person re-identification datasets. We believe that the proposed new dataset will enable further development of person re-identification research for challenging real-world applications. DAA dataset can be downloaded from https://bit.ly/3AtXTd6

Ayush K Rai, Tarun Krishna, Julia Dietlmeier et al.

Detecting generic, taxonomy-free event boundaries invideos represents a major stride forward towards holisticvideo understanding. In this paper we present a technique forgeneric event boundary detection based on a two stream in-flated 3D convolutions architecture, which can learn spatio-temporal features from videos. Our work is inspired from theGeneric Event Boundary Detection Challenge (part of CVPR2021 Long Form Video Understanding- LOVEU Workshop).Throughout the paper we provide an in-depth analysis ofthe experiments performed along with an interpretation ofthe results obtained.

Julia Dietlmeier, Joseph Antony, Kevin McGuinness et al.

This paper investigates the dependence of existing state-of-the-art person re-identification models on the presence and visibility of human faces. We apply a face detection and blurring algorithm to create anonymized versions of several popular person re-identification datasets including Market1501, DukeMTMC-reID, CUHK03, Viper, and Airport. Using a cross-section of existing state-of-the-art models that range in accuracy and computational efficiency, we evaluate the effect of this anonymization on re-identification performance using standard metrics. Perhaps surprisingly, the effect on mAP is very small, and accuracy is recovered by simply training on the anonymized versions of the data rather than the original data. These findings are consistent across multiple models and datasets. These results indicate that datasets can be safely anonymized by blurring faces without significantly impacting the performance of person reidentification systems, and may allow for the release of new richer re-identification datasets where previously there were privacy or data protection concerns.