Daniel Tweneboah Anyimadu

Daniel Tweneboah Anyimadu, Mohammed M. Abdelsamea, Ahmed Karam Eldaly

Low-field magnetic resonance imaging (MRI) offers affordable access to diagnostic imaging but faces challenges such as prolonged acquisition times and reduced image quality. Although accelerated imaging via k-space undersampling helps reduce scan time, image quality enhancement methods often rely on spatial-domain postprocessing. Deep learning achieved state-of-the-art results in both domains. However, most models are trained and evaluated using in-distribution (InD) data, creating a significant gap in understanding model performance when tested using out-of-distribution (OOD) data. To address these issues, we propose a novel framework that reconstructs high-field-like MR images directly from undersampled low-field MRI k-space, quantifies the impact of reduced sampling, and evaluates the generalisability of the model using OOD. Our approach utilises a k-space dual channel U-Net to jointly process the real and imaginary components of undersampled k-space, restoring missing frequency content, and incorporates an ensemble strategy to generate uncertainty maps. Experiments on low-field brain MRI demonstrate that our k-space-driven image quality enhancement outperforms the counterpart spatial-domain and other state-of-the-art baselines, achieving image quality comparable to full high-field k-space acquisitions using OOD data. To the best of our knowledge, this work is among the first to combine low-field MR image reconstruction, quality enhancement using undersampled k-space, and uncertainty quantification within a unified framework.

Daniel Tweneboah Anyimadu, Mohammed Abdalla, Mohammed M. Abdelsamea et al.

Low-field magnetic resonance imaging (MRI) offers a cost-effective alternative for medical imaging in resource-limited settings. However, its widespread adoption is hindered by two key challenges: prolonged scan times and reduced image quality. Accelerated acquisition can be achieved using k-space undersampling, while image enhancement traditionally relies on spatial-domain postprocessing. In this work, we propose a novel deep learning framework based on a U-Net variant that operates directly in k-space to super-resolve low-field MR images directly using undersampled data while quantifying the impact of reduced k-space sampling. Unlike conventional approaches that treat image super-resolution as a postprocessing step following image reconstruction from undersampled k-space, our unified model integrates both processes, leveraging k-space information to achieve superior image fidelity. Extensive experiments on synthetic and real low-field brain MRI datasets demonstrate that k-space-driven image super-resolution outperforms conventional spatial-domain counterparts. Furthermore, our results show that undersampled k-space reconstructions achieve comparable quality to full k-space acquisitions, enabling substantial scan-time acceleration without compromising diagnostic utility.

Mohammed M. Abdelsamea, Daniel Tweneboah Anyimadu, Tasneem Selim et al.

Medical imaging models frequently fail when deployed across hospitals, scanners, populations, or imaging protocols due to domain shift, limiting their clinical reliability. While transfer learning and domain adaptation address such shifts statistically, they often rely on spurious correlations that break under changing conditions. On the other hand, causal inference provides a principled way to identify invariant mechanisms that remain stable across environments. This survey introduces and systematises Causal Transfer Learning (CTL) for medical image analysis. This paradigm integrates causal reasoning with cross-domain representation learning to enable robust and generalisable clinical AI. We frame domain shift as a causal problem and analyse how structural causal models, invariant risk minimisation, and counterfactual reasoning can be embedded within transfer learning pipelines. We studied spanning classification, segmentation, reconstruction, anomaly detection, and multimodal imaging, and organised them by task, shift type, and causal assumption. A unified taxonomy is proposed that connects causal frameworks and transfer mechanisms. We further summarise datasets, benchmarks, and empirical gains, highlighting when and why causal transfer outperforms correlation-based domain adaptation. Finally, we discuss how CTL supports fairness, robustness, and trustworthy deployment in multi-institutional and federated settings, and outline open challenges and research directions for clinically reliable medical imaging AI.

Mohammad Imran Hossain, Muhammad Zain Amin, Daniel Tweneboah Anyimadu et al.

Automatic brain tissue segmentation from Magnetic Resonance Imaging (MRI) images is vital for accurate diagnosis and further analysis in medical imaging. Despite advancements in segmentation techniques, a comprehensive comparison between traditional statistical methods and modern deep learning approaches using pre-processing techniques like N4 Bias Field Correction and Anisotropic Diffusion remains underexplored. This study provides a comparative analysis of various segmentation models, including Probabilistic ATLAS, U-Net, nnU-Net, and LinkNet, enhanced with these pre-processing techniques to segment brain tissues (white matter (WM), grey matter (GM) and cerebrospinal fluid (CSF)) on the Internet Brain Segmentation Repository (IBSR18) dataset. Our results demonstrate that the 3D nnU-Net model outperforms others, achieving the highest mean Dice Coefficient score (0.937 +- 0.012), while the 2D nnU-Net model recorded the lowest mean Hausdorff Distance (5.005 +- 0.343 mm) and the lowest mean Absolute Volumetric Difference (3.695 +- 2.931 mm) across five unseen test samples. The findings highlight the superiority of nnU-Net models in brain tissue segmentation, particularly when combined with N4 Bias Field Correction and Anisotropic Diffusion pre-processing techniques. Our implemented code can be accessed via GitHub.