Loı̈c M. Roch

h-index22
2papers
3,331citations

2 Papers

5.0MLMar 5, 2021Code
Gemini: Dynamic Bias Correction for Autonomous Experimentation and Molecular Simulation

Riley J. Hickman, Florian Häse, Loïc M. Roch et al.

Bayesian optimization has emerged as a powerful strategy to accelerate scientific discovery by means of autonomous experimentation. However, expensive measurements are required to accurately estimate materials properties, and can quickly become a hindrance to exhaustive materials discovery campaigns. Here, we introduce Gemini: a data-driven model capable of using inexpensive measurements as proxies for expensive measurements by correcting systematic biases between property evaluation methods. We recommend using Gemini for regression tasks with sparse data and in an autonomous workflow setting where its predictions of expensive to evaluate objectives can be used to construct a more informative acquisition function, thus reducing the number of expensive evaluations an optimizer needs to achieve desired target values. In a regression setting, we showcase the ability of our method to make accurate predictions of DFT calculated bandgaps of hybrid organic-inorganic perovskite materials. We further demonstrate the benefits that Gemini provides to autonomous workflows by augmenting the Bayesian optimizer Phoenics to yeild a scalable optimization framework leveraging multiple sources of measurement. Finally, we simulate an autonomous materials discovery platform for optimizing the activity of electrocatalysts for the oxygen evolution reaction. Realizing autonomous workflows with Gemini, we show that the number of measurements of a composition space comprising expensive and rare metals needed to achieve a target overpotential is significantly reduced when measurements from a proxy composition system with less expensive metals are available.

1.9MLJan 4, 2018
PHOENICS: A universal deep Bayesian optimizer

Florian Häse, Loïc M. Roch, Christoph Kreisbeck et al.

In this work we introduce PHOENICS, a probabilistic global optimization algorithm combining ideas from Bayesian optimization with concepts from Bayesian kernel density estimation. We propose an inexpensive acquisition function balancing the explorative and exploitative behavior of the algorithm. This acquisition function enables intuitive sampling strategies for an efficient parallel search of global minima. The performance of PHOENICS is assessed via an exhaustive benchmark study on a set of 15 discrete, quasi-discrete and continuous multidimensional functions. Unlike optimization methods based on Gaussian processes (GP) and random forests (RF), we show that PHOENICS is less sensitive to the nature of the co-domain, and outperforms GP and RF optimizations. We illustrate the performance of PHOENICS on the Oregonator, a difficult case-study describing a complex chemical reaction network. We demonstrate that only PHOENICS was able to reproduce qualitatively and quantitatively the target dynamic behavior of this nonlinear reaction dynamics. We recommend PHOENICS for rapid optimization of scalar, possibly non-convex, black-box unknown objective functions.