Feng Ji

Xingchao Jian, Purui Zhang, Lan Tian et al.

Detecting the origin of information or infection spread in networks is a fundamental challenge with applications in misinformation tracking, epidemiology, and beyond. We study the multi-source detection problem: given snapshot observations of node infection status on a graph, estimate the set of source nodes that initiated the propagation. Existing methods either lack statistical guarantees or are limited to specific diffusion models and assumptions. We propose a novel conformal prediction framework that provides statistically valid recall guarantees for source set detection, independent of the underlying diffusion process or data distribution. Our approach introduces principled score functions to quantify the alignment between predicted probabilities and true sources, and leverages a calibration set to construct prediction sets with user-specified recall and coverage levels. The method is applicable to both single- and multi-source scenarios, supports general network diffusion dynamics, and is computationally efficient for large graphs. Empirical results demonstrate that our method achieves rigorous coverage with competitive accuracy, outperforming existing baselines in both reliability and scalability.The code is available online.

See Hian Lee, Feng Ji, Kelin Xia et al.

Traditionally, graph neural networks have been trained using a single observed graph. However, the observed graph represents only one possible realization. In many applications, the graph may encounter uncertainties, such as having erroneous or missing edges, as well as edge weights that provide little informative value. To address these challenges and capture additional information previously absent in the observed graph, we introduce latent variables to parameterize and generate multiple graphs. We obtain the maximum likelihood estimate of the network parameters in an Expectation-Maximization (EM) framework based on the multiple graphs. Specifically, we iteratively determine the distribution of the graphs using a Markov Chain Monte Carlo (MCMC) method, incorporating the principles of PAC-Bayesian theory. Numerical experiments demonstrate improvements in performance against baseline models on node classification for heterogeneous graphs and graph regression on chemistry datasets.

Qiyu Kang, Kai Zhao, Qinxu Ding et al.

We introduce the FRactional-Order graph Neural Dynamical network (FROND), a new continuous graph neural network (GNN) framework. Unlike traditional continuous GNNs that rely on integer-order differential equations, FROND employs the Caputo fractional derivative to leverage the non-local properties of fractional calculus. This approach enables the capture of long-term dependencies in feature updates, moving beyond the Markovian update mechanisms in conventional integer-order models and offering enhanced capabilities in graph representation learning. We offer an interpretation of the node feature updating process in FROND from a non-Markovian random walk perspective when the feature updating is particularly governed by a diffusion process. We demonstrate analytically that oversmoothing can be mitigated in this setting. Experimentally, we validate the FROND framework by comparing the fractional adaptations of various established integer-order continuous GNNs, demonstrating their consistently improved performance and underscoring the framework's potential as an effective extension to enhance traditional continuous GNNs. The code is available at \url{https://github.com/zknus/ICLR2024-FROND}.

Yanan Zhao, Feng Ji, Jingyang Dai et al.

Graph contrastive learning (GCL) learns node and graph representations by contrasting multiple views of the same graph. Existing methods typically rely on fixed, handcrafted views-usually a local and a global perspective, which limits their ability to capture multi-scale structural patterns. We present an augmentation-free, multi-view GCL framework grounded in fractional-order continuous dynamics. By varying the fractional derivative order $α\in (0,1]$, our encoders produce a continuous spectrum of views: small $α$ yields localized features, while large $α$ induces broader, global aggregation. We treat $α$ as a learnable parameter so the model can adapt diffusion scales to the data and automatically discover informative views. This principled approach generates diverse, complementary representations without manual augmentations. Extensive experiments on standard benchmarks demonstrate that our method produces more robust and expressive embeddings and outperforms state-of-the-art GCL baselines.

Kai Zhao, Xuhao Li, Qiyu Kang et al.

We introduce the Distributed-order fRActional Graph Operating Network (DRAGON), a novel continuous Graph Neural Network (GNN) framework that incorporates distributed-order fractional calculus. Unlike traditional continuous GNNs that utilize integer-order or single fractional-order differential equations, DRAGON uses a learnable probability distribution over a range of real numbers for the derivative orders. By allowing a flexible and learnable superposition of multiple derivative orders, our framework captures complex graph feature updating dynamics beyond the reach of conventional models. We provide a comprehensive interpretation of our framework's capability to capture intricate dynamics through the lens of a non-Markovian graph random walk with node feature updating driven by an anomalous diffusion process over the graph. Furthermore, to highlight the versatility of the DRAGON framework, we conduct empirical evaluations across a range of graph learning tasks. The results consistently demonstrate superior performance when compared to traditional continuous GNN models. The implementation code is available at \url{https://github.com/zknus/NeurIPS-2024-DRAGON}.

Yanan Zhao, Feng Ji, Kai Zhao et al.

Graph Contrastive Learning (GCL) has recently made progress as an unsupervised graph representation learning paradigm. GCL approaches can be categorized into augmentation-based and augmentation-free methods. The former relies on complex data augmentations, while the latter depends on encoders that can generate distinct views of the same input. Both approaches may require negative samples for training. In this paper, we introduce a novel augmentation-free GCL framework based on graph neural diffusion models. Specifically, we utilize learnable encoders governed by Fractional Differential Equations (FDE). Each FDE is characterized by an order parameter of the differential operator. We demonstrate that varying these parameters allows us to produce learnable encoders that generate diverse views, capturing either local or global information, for contrastive learning. Our model does not require negative samples for training and is applicable to both homophilic and heterophilic datasets. We demonstrate its effectiveness across various datasets, achieving state-of-the-art performance.