Arielle Sanford

Arielle Sanford, Andrew T. Kamen, Frederic T. Chong et al.

We introduce HAML (Hamiltonian Adaptation via Meta-Learning), a framework for fast online adaptation of effective Hamiltonian models of superconducting quantum processors. HAML proceeds in two phases. A supervised training phase uses an ensemble of simulated devices to learn an offline map from control inputs and device parameters to effective Hamiltonian coefficients. An online adaptation phase then uses a small number of hardware-accessible measurements to identify the unknown parameters of a new device. By training directly against effective two-qubit coefficients extracted from full multi-mode simulations, HAML implicitly learns the reduction from full multi-mode Hamiltonians to effective qubit descriptions without invoking perturbation theory. We further show that a variance-maximizing greedy selection of measurement configurations boosts online adaptation efficiency. We demonstrate HAML on a transmon-coupler-transmon system, recovering effective two-qubit coefficients across a wide range of operating regimes, including parameter regions where Schrieffer-Wolff perturbation theory (SWPT) breaks down. This establishes a scalable, sample-efficient approach to Hamiltonian reduction and characterization for near-term quantum processors, with direct implications for calibration, control, and error mitigation.

Arielle Sanford, Shuo Sun, Christian B. Mendl

Recent advances in protein structure prediction, such as AlphaFold, have demonstrated the power of deep neural architectures like the Evoformer for capturing complex spatial and evolutionary constraints on protein conformation. However, the depth of the Evoformer, comprising 48 stacked blocks, introduces high computational costs and rigid layerwise discretization. Inspired by Neural Ordinary Differential Equations (Neural ODEs), we propose a continuous-depth formulation of the Evoformer, replacing its 48 discrete blocks with a Neural ODE parameterization that preserves its core attention-based operations. This continuous-time Evoformer achieves constant memory cost (in depth) via the adjoint method, while allowing a principled trade-off between runtime and accuracy through adaptive ODE solvers. Benchmarking on protein structure prediction tasks, we find that the Neural ODE-based Evoformer produces structurally plausible predictions and reliably captures certain secondary structure elements, such as alpha-helices, though it does not fully replicate the accuracy of the original architecture. However, our model achieves this performance using dramatically fewer resources, just 17.5 hours of training on a single GPU, highlighting the promise of continuous-depth models as a lightweight and interpretable alternative for biomolecular modeling. This work opens new directions for efficient and adaptive protein structure prediction frameworks.