8.5IVAug 26, 2024
Automated Quantification of White Blood Cells in Light Microscopic Images of Injured Skeletal MuscleYang Jiao, Hananeh Derakhshan, Barbara St. Pierre Schneider et al.
White blood cells (WBCs) are the most diverse cell types observed in the healing process of injured skeletal muscles. In the course of healing, WBCs exhibit dynamic cellular response and undergo multiple protein expression changes. The progress of healing can be analyzed by quantifying the number of WBCs or the amount of specific proteins in light microscopic images obtained at different time points after injury. In this paper, we propose an automated quantifying and analysis framework to analyze WBCs using light microscopic images of uninjured and injured muscles. The proposed framework is based on the Localized Iterative Otsu's threshold method with muscle edge detection and region of interest extraction. Compared with the threshold methods used in ImageJ, the LI Otsu's threshold method has high resistance to background area and achieves better accuracy. The CD68-positive cell results are presented for demonstrating the effectiveness of the proposed work.
Lumen: Unleashing Versatile Vision-Centric Capabilities of Large Multimodal ModelsYang Jiao, Shaoxiang Chen, Zequn Jie et al.
Large Multimodal Model (LMM) is a hot research topic in the computer vision area and has also demonstrated remarkable potential across multiple disciplinary fields. A recent trend is to further extend and enhance the perception capabilities of LMMs. The current methods follow the paradigm of adapting the visual task outputs to the format of the language model, which is the main component of a LMM. This adaptation leads to convenient development of such LMMs with minimal modifications, however, it overlooks the intrinsic characteristics of diverse visual tasks and hinders the learning of perception capabilities. To address this issue, we propose a novel LMM architecture named Lumen, a Large multimodal model with versatile vision-centric capability enhancement. We decouple the LMM's learning of perception capabilities into task-agnostic and task-specific stages. Lumen first promotes fine-grained vision-language concept alignment, which is the fundamental capability for various visual tasks. Thus the output of the task-agnostic stage is a shared representation for all the tasks we address in this paper. Then the task-specific decoding is carried out by flexibly routing the shared representation to lightweight task decoders with negligible training efforts. Comprehensive experimental results on a series of vision-centric and VQA benchmarks indicate that our Lumen model not only achieves or surpasses the performance of existing LMM-based approaches in a range of vision-centric tasks while maintaining general visual understanding and instruction following capabilities. The code will be released at https://github.com/SxJyJay/Lumen.
5.3LGNov 8, 2023
Bandit Learning to Rank with Position-Based Click Models: Personalized and Equal TreatmentsTianchen Zhou, Jia Liu, Yang Jiao et al.
Online learning to rank (ONL2R) is a foundational problem for recommender systems and has received increasing attention in recent years. Among the existing approaches for ONL2R, a natural modeling architecture is the multi-armed bandit framework coupled with the position-based click model. However, developing efficient online learning policies for MAB-based ONL2R with position-based click models is highly challenging due to the combinatorial nature of the problem, and partial observability in the position-based click model. To date, results in MAB-based ONL2R with position-based click models remain rather limited, which motivates us to fill this gap in this work. Our main contributions in this work are threefold: i) We propose the first general MAB framework that captures all key ingredients of ONL2R with position-based click models. Our model considers personalized and equal treatments in ONL2R ranking recommendations, both of which are widely used in practice; ii) Based on the above analytical framework, we develop two unified greed- and UCB-based policies called GreedyRank and UCBRank, each of which can be applied to personalized and equal ranking treatments; and iii) We show that both GreedyRank and UCBRank enjoy $O(\sqrt{t}\ln t)$ and $O(\sqrt{t\ln t})$ anytime sublinear regret for personalized and equal treatment, respectively. For the fundamentally hard equal ranking treatment, we identify classes of collective utility functions and their associated sufficient conditions under which $O(\sqrt{t}\ln t)$ and $O(\sqrt{t\ln t})$ anytime sublinear regrets are still achievable for GreedyRank and UCBRank, respectively. Our numerical experiments also verify our theoretical results and demonstrate the efficiency of GreedyRank and UCBRank in seeking the optimal action under various problem settings.
Two-stage Visual Cues Enhancement Network for Referring Image SegmentationYang Jiao, Zequn Jie, Weixin Luo et al.
Referring Image Segmentation (RIS) aims at segmenting the target object from an image referred by one given natural language expression. The diverse and flexible expressions as well as complex visual contents in the images raise the RIS model with higher demands for investigating fine-grained matching behaviors between words in expressions and objects presented in images. However, such matching behaviors are hard to be learned and captured when the visual cues of referents (i.e. referred objects) are insufficient, as the referents with weak visual cues tend to be easily confused by cluttered background at boundary or even overwhelmed by salient objects in the image. And the insufficient visual cues issue can not be handled by the cross-modal fusion mechanisms as done in previous work. In this paper, we tackle this problem from a novel perspective of enhancing the visual information for the referents by devising a Two-stage Visual cues enhancement Network (TV-Net), where a novel Retrieval and Enrichment Scheme (RES) and an Adaptive Multi-resolution feature Fusion (AMF) module are proposed. Through the two-stage enhancement, our proposed TV-Net enjoys better performances in learning fine-grained matching behaviors between the natural language expression and image, especially when the visual information of the referent is inadequate, thus produces better segmentation results. Extensive experiments are conducted to validate the effectiveness of the proposed method on the RIS task, with our proposed TV-Net surpassing the state-of-the-art approaches on four benchmark datasets.
4.7CVJan 16, 2021
Optical Flow Estimation via Motion Feature RecoveryYang Jiao, Guangming Shi, Trac D. Tran
Optical flow estimation with occlusion or large displacement is a problematic challenge due to the lost of corresponding pixels between consecutive frames. In this paper, we discover that the lost information is related to a large quantity of motion features (more than 40%) computed from the popular discriminative cost-volume feature would completely vanish due to invalid sampling, leading to the low efficiency of optical flow learning. We call this phenomenon the Vanishing Cost Volume Problem. Inspired by the fact that local motion tends to be highly consistent within a short temporal window, we propose a novel iterative Motion Feature Recovery (MFR) method to address the vanishing cost volume via modeling motion consistency across multiple frames. In each MFR iteration, invalid entries from original motion features are first determined based on the current flow. Then, an efficient network is designed to adaptively learn the motion correlation to recover invalid features for lost-information restoration. The final optical flow is then decoded from the recovered motion features. Experimental results on Sintel and KITTI show that our method achieves state-of-the-art performances. In fact, MFR currently ranks second on Sintel public website.
5.0CVNov 16, 2020
2D+3D Facial Expression Recognition via Discriminative Dynamic Range Enhancement and Multi-Scale LearningYang Jiao, Yi Niu, Trac D. Tran et al.
In 2D+3D facial expression recognition (FER), existing methods generate multi-view geometry maps to enhance the depth feature representation. However, this may introduce false estimations due to local plane fitting from incomplete point clouds. In this paper, we propose a novel Map Generation technique from the viewpoint of information theory, to boost the slight 3D expression differences from strong personality variations. First, we examine the HDR depth data to extract the discriminative dynamic range $r_{dis}$, and maximize the entropy of $r_{dis}$ to a global optimum. Then, to prevent the large deformation caused by over-enhancement, we introduce a depth distortion constraint and reduce the complexity from $O(KN^2)$ to $O(KNτ)$. Furthermore, the constrained optimization is modeled as a $K$-edges maximum weight path problem in a directed acyclic graph, and we solve it efficiently via dynamic programming. Finally, we also design an efficient Facial Attention structure to automatically locate subtle discriminative facial parts for multi-scale learning, and train it with a proposed loss function $\mathcal{L}_{FA}$ without any facial landmarks. Experimental results on different datasets show that the proposed method is effective and outperforms the state-of-the-art 2D+3D FER methods in both FER accuracy and the output entropy of the generated maps.
10.6CVNov 16, 2020
EffiScene: Efficient Per-Pixel Rigidity Inference for Unsupervised Joint Learning of Optical Flow, Depth, Camera Pose and Motion SegmentationYang Jiao, Trac D. Tran, Guangming Shi
This paper addresses the challenging unsupervised scene flow estimation problem by jointly learning four low-level vision sub-tasks: optical flow $\textbf{F}$, stereo-depth $\textbf{D}$, camera pose $\textbf{P}$ and motion segmentation $\textbf{S}$. Our key insight is that the rigidity of the scene shares the same inherent geometrical structure with object movements and scene depth. Hence, rigidity from $\textbf{S}$ can be inferred by jointly coupling $\textbf{F}$, $\textbf{D}$ and $\textbf{P}$ to achieve more robust estimation. To this end, we propose a novel scene flow framework named EffiScene with efficient joint rigidity learning, going beyond the existing pipeline with independent auxiliary structures. In EffiScene, we first estimate optical flow and depth at the coarse level and then compute camera pose by Perspective-$n$-Points method. To jointly learn local rigidity, we design a novel Rigidity From Motion (RfM) layer with three principal components: \emph{}{(i)} correlation extraction; \emph{}{(ii)} boundary learning; and \emph{}{(iii)} outlier exclusion. Final outputs are fused based on the rigid map $M_R$ from RfM at finer levels. To efficiently train EffiScene, two new losses $\mathcal{L}_{bnd}$ and $\mathcal{L}_{unc}$ are designed to prevent trivial solutions and to regularize the flow boundary discontinuity. Extensive experiments on scene flow benchmark KITTI show that our method is effective and significantly improves the state-of-the-art approaches for all sub-tasks, i.e. optical flow ($5.19 \rightarrow 4.20$), depth estimation ($3.78 \rightarrow 3.46$), visual odometry ($0.012 \rightarrow 0.011$) and motion segmentation ($0.57 \rightarrow 0.62$).
1.2ASOct 21, 2020
BERT for Joint Multichannel Speech Dereverberation with Spatial-aware TasksYang Jiao
We propose a method for joint multichannel speech dereverberation with two spatial-aware tasks: direction-of-arrival (DOA) estimation and speech separation. The proposed method addresses involved tasks as a sequence to sequence mapping problem, which is general enough for a variety of front-end speech enhancement tasks. The proposed method is inspired by the excellent sequence modeling capability of bidirectional encoder representation from transformers (BERT). Instead of utilizing explicit representations from pretraining in a self-supervised manner, we utilizes transformer encoded hidden representations in a supervised manner. Both multichannel spectral magnitude and spectral phase information of varying length utterances are encoded. Experimental result demonstrates the effectiveness of the proposed method.
2.3ASJul 16, 2020
Translate Reverberated Speech to Anechoic Ones: Speech Dereverberation with BERTYang Jiao
Single channel speech dereverberation is considered in this work. Inspired by the recent success of Bidirectional Encoder Representations from Transformers (BERT) model in the domain of Natural Language Processing (NLP), we investigate its applicability as backbone sequence model to enhance reverberated speech signal. We present a variation of the basic BERT model: a pre-sequence network, which extracts local spectral-temporal information and/or provides order information, before the backbone sequence model. In addition, we use pre-trained neural vocoder for implicit phase reconstruction. To evaluate our method, we used the data from the 3rd CHiME challenge, and compare our results with other methods. Experiments show that the proposed method outperforms traditional method WPE, and achieve comparable performance with state-of-the-art BLSTM-based sequence models.
3.6IVNov 26, 2019
Multi-Object Portion Tracking in 4D Fluorescence Microscopy Imagery with Deep Feature MapsYang Jiao, Mo Weng, Mei Yang
3D fluorescence microscopy of living organisms has increasingly become an essential and powerful tool in biomedical research and diagnosis. An exploding amount of imaging data has been collected, whereas efficient and effective computational tools to extract information from them are still lagging behind. This is largely due to the challenges in analyzing biological data. Interesting biological structures are not only small, but are often morphologically irregular and highly dynamic. Although tracking cells in live organisms has been studied for years, existing tracking methods for cells are not effective in tracking subcellular structures, such as protein complexes, which feature in continuous morphological changes including split and merge, in addition to fast migration and complex motion. In this paper, we first define the problem of multi-object portion tracking to model the protein object tracking process. A multi-object tracking method with portion matching is proposed based on 3D segmentation results. The proposed method distills deep feature maps from deep networks, then recognizes and matches object portions using an extended search. Experimental results confirm that the proposed method achieves 2.96% higher on consistent tracking accuracy and 35.48% higher on event identification accuracy than the state-of-art methods.