Peng Xie

h-index7
2papers
146citations

2 Papers

3.1LGApr 24, 2021
Exploring Multi-dimensional Data via Subset Embedding

Peng Xie, Wenyuan Tao, Jie Li et al.

Multi-dimensional data exploration is a classic research topic in visualization. Most existing approaches are designed for identifying record patterns in dimensional space or subspace. In this paper, we propose a visual analytics approach to exploring subset patterns. The core of the approach is a subset embedding network (SEN) that represents a group of subsets as uniformly-formatted embeddings. We implement the SEN as multiple subnets with separate loss functions. The design enables to handle arbitrary subsets and capture the similarity of subsets on single features, thus achieving accurate pattern exploration, which in most cases is searching for subsets having similar values on few features. Moreover, each subnet is a fully-connected neural network with one hidden layer. The simple structure brings high training efficiency. We integrate the SEN into a visualization system that achieves a 3-step workflow. Specifically, analysts (1) partition the given dataset into subsets, (2) select portions in a projected latent space created using the SEN, and (3) determine the existence of patterns within selected subsets. Generally, the system combines visualizations, interactions, automatic methods, and quantitative measures to balance the exploration flexibility and operation efficiency, and improve the interpretability and faithfulness of the identified patterns. Case studies and quantitative experiments on multiple open datasets demonstrate the general applicability and effectiveness of our approach.

1.2CVMar 19, 2020
Quality Control of Neuron Reconstruction Based on Deep Learning

Donghuan Lu, Sujun Zhao, Peng Xie et al.

Neuron reconstruction is essential to generate exquisite neuron connectivity map for understanding brain function. Despite the significant amount of effect that has been made on automatic reconstruction methods, manual tracing by well-trained human annotators is still necessary. To ensure the quality of reconstructed neurons and provide guidance for annotators to improve their efficiency, we propose a deep learning based quality control method for neuron reconstruction in this paper. By formulating the quality control problem into a binary classification task regarding each single point, the proposed approach overcomes the technical difficulties resulting from the large image size and complex neuron morphology. Not only it provides the evaluation of reconstruction quality, but also can locate exactly where the wrong tracing begins. This work presents one of the first comprehensive studies for whole-brain scale quality control of neuron reconstructions. Experiments on five-fold cross validation with a large dataset demonstrate that the proposed approach can detect 74.7% errors with only 1.4% false alerts.