Hui Liu

Wenzhuo Tang, Hongzhi Wen, Renming Liu et al.

The recent development of multimodal single-cell technology has made the possibility of acquiring multiple omics data from individual cells, thereby enabling a deeper understanding of cellular states and dynamics. Nevertheless, the proliferation of multimodal single-cell data also introduces tremendous challenges in modeling the complex interactions among different modalities. The recently advanced methods focus on constructing static interaction graphs and applying graph neural networks (GNNs) to learn from multimodal data. However, such static graphs can be suboptimal as they do not take advantage of the downstream task information; meanwhile GNNs also have some inherent limitations when deeply stacking GNN layers. To tackle these issues, in this work, we investigate how to leverage transformers for multimodal single-cell data in an end-to-end manner while exploiting downstream task information. In particular, we propose a scMoFormer framework which can readily incorporate external domain knowledge and model the interactions within each modality and cross modalities. Extensive experiments demonstrate that scMoFormer achieves superior performance on various benchmark datasets. Remarkably, scMoFormer won a Kaggle silver medal with the rank of 24/1221 (Top 2%) without ensemble in a NeurIPS 2022 competition. Our implementation is publicly available at Github.

Yu Song, Zhigang Hua, Yan Xie et al.

Self-supervised learning (SSL) has shown great promise in graph representation learning. However, most existing graph SSL methods are developed and evaluated under a single-dataset setting, leaving their cross-dataset transferability largely unexplored and limiting their ability to leverage knowledge transfer and large-scale pretraining, factors that are critical for developing generalized intelligence beyond fitting training data. To address this gap and advance foundation model research for graphs, we present GSTBench, the first systematic benchmark for evaluating the transferability of graph SSL methods. We conduct large-scale pretraining on ogbn-papers100M and evaluate five representative SSL methods across a diverse set of target graphs. Our standardized experimental setup decouples confounding factors such as model architecture, dataset characteristics, and adaptation protocols, enabling rigorous comparisons focused solely on pretraining objectives. Surprisingly, we observe that most graph SSL methods struggle to generalize, with some performing worse than random initialization. In contrast, GraphMAE, a masked autoencoder approach, consistently improves transfer performance. We analyze the underlying factors that drive these differences and offer insights to guide future research on transferable graph SSL, laying a solid foundation for the "pretrain-then-transfer" paradigm in graph learning. Our code is available at https://github.com/SongYYYY/GSTBench.

Liangbo Ning, Ziran Liang, Zhuohang Jiang et al.

With the advancement of web techniques, they have significantly revolutionized various aspects of people's lives. Despite the importance of the web, many tasks performed on it are repetitive and time-consuming, negatively impacting overall quality of life. To efficiently handle these tedious daily tasks, one of the most promising approaches is to advance autonomous agents based on Artificial Intelligence (AI) techniques, referred to as AI Agents, as they can operate continuously without fatigue or performance degradation. In the context of the web, leveraging AI Agents -- termed WebAgents -- to automatically assist people in handling tedious daily tasks can dramatically enhance productivity and efficiency. Recently, Large Foundation Models (LFMs) containing billions of parameters have exhibited human-like language understanding and reasoning capabilities, showing proficiency in performing various complex tasks. This naturally raises the question: `Can LFMs be utilized to develop powerful AI Agents that automatically handle web tasks, providing significant convenience to users?' To fully explore the potential of LFMs, extensive research has emerged on WebAgents designed to complete daily web tasks according to user instructions, significantly enhancing the convenience of daily human life. In this survey, we comprehensively review existing research studies on WebAgents across three key aspects: architectures, training, and trustworthiness. Additionally, several promising directions for future research are explored to provide deeper insights.

Xianren Zhang, Hui Liu, Delvin Ce Zhang et al.

Multimodal Large Language Models (MLLMs) trained on massive data may memorize sensitive personal information and photos, posing serious privacy risks. To mitigate this, MLLM unlearning methods are proposed, which fine-tune MLLMs to reduce the ``forget'' sensitive information. However, it remains unclear whether the knowledge has been truly forgotten or just hidden in the model. Therefore, we propose to study a novel problem of LLM unlearning attack, which aims to recover the unlearned knowledge of an unlearned LLM. To achieve the goal, we propose a novel framework Stealthy Unlearning Attack (SUA) framework that learns a universal noise pattern. When applied to input images, this noise can trigger the model to reveal unlearned content. While pixel-level perturbations may be visually subtle, they can be detected in the semantic embedding space, making such attacks vulnerable to potential defenses. To improve stealthiness, we introduce an embedding alignment loss that minimizes the difference between the perturbed and denoised image embeddings, ensuring the attack is semantically unnoticeable. Experimental results show that SUA can effectively recover unlearned information from MLLMs. Furthermore, the learned noise generalizes well: a single perturbation trained on a subset of samples can reveal forgotten content in unseen images. This indicates that knowledge reappearance is not an occasional failure, but a consistent behavior.

Yu Song, Haitao Mao, Jiachen Xiao et al.

Pretraining plays a pivotal role in acquiring generalized knowledge from large-scale data, achieving remarkable successes as evidenced by large models in CV and NLP. However, progress in the graph domain remains limited due to fundamental challenges such as feature heterogeneity and structural heterogeneity. Recently, increasing efforts have been made to enhance node feature quality with Large Language Models (LLMs) on text-attributed graphs (TAGs), demonstrating superiority to traditional bag-of-words or word2vec techniques. These high-quality node features reduce the previously critical role of graph structure, resulting in a modest performance gap between Graph Neural Networks (GNNs) and structure-agnostic Multi-Layer Perceptrons (MLPs). Motivated by this, we introduce a feature-centric pretraining perspective by treating graph structure as a prior and leveraging the rich, unified feature space to learn refined interaction patterns that generalizes across graphs. Our framework, Graph Sequence Pretraining with Transformer (GSPT), samples node contexts through random walks and employs masked feature reconstruction to capture pairwise proximity in the LLM-unified feature space using a standard Transformer. By utilizing unified text representations rather than varying structures, our framework achieves significantly better transferability among graphs within the same domain. GSPT can be easily adapted to both node classification and link prediction, demonstrating promising empirical success on various datasets.

Haochen Liu, Jamell Dacon, Wenqi Fan et al.

Recently there are increasing concerns about the fairness of Artificial Intelligence (AI) in real-world applications such as computer vision and recommendations. For example, recognition algorithms in computer vision are unfair to black people such as poorly detecting their faces and inappropriately identifying them as "gorillas". As one crucial application of AI, dialogue systems have been extensively applied in our society. They are usually built with real human conversational data; thus they could inherit some fairness issues which are held in the real world. However, the fairness of dialogue systems has not been well investigated. In this paper, we perform a pioneering study about the fairness issues in dialogue systems. In particular, we construct a benchmark dataset and propose quantitative measures to understand fairness in dialogue models. Our studies demonstrate that popular dialogue models show significant prejudice towards different genders and races. Besides, to mitigate the bias in dialogue systems, we propose two simple but effective debiasing methods. Experiments show that our methods can reduce the bias in dialogue systems significantly. The dataset and the implementation are released to foster fairness research in dialogue systems.