Haoming Chen

Xin Zhang, Liangxiu Han, Lianghao Han et al.

Structural magnetic resonance imaging (sMRI) can identify subtle brain changes due to its high contrast for soft tissues and high spatial resolution. It has been widely used in diagnosing neurological brain diseases, such as Alzheimer disease (AD). However, the size of 3D high-resolution data poses a significant challenge for data analysis and processing. Since only a few areas of the brain show structural changes highly associated with AD, the patch-based methods dividing the whole image data into several small regular patches have shown promising for more efficient sMRI-based image analysis. The major challenges of the patch-based methods on sMRI include identifying the discriminative patches, combining features from the discrete discriminative patches, and designing appropriate classifiers. This work proposes a novel patch-based deep learning network (sMRI-PatchNet) with explainable patch localisation and selection for AD diagnosis using sMRI. Specifically, it consists of two primary components: 1) A fast and efficient explainable patch selection mechanism for determining the most discriminative patches based on computing the SHapley Additive exPlanations (SHAP) contribution to a transfer learning model for AD diagnosis on massive medical data; and 2) A novel patch-based network for extracting deep features and AD classfication from the selected patches with position embeddings to retain position information, capable of capturing the global and local information of inter- and intra-patches. This method has been applied for the AD classification and the prediction of the transitional state moderate cognitive impairment (MCI) conversion with real datasets.

Zhenguang Liu, Runyang Feng, Haoming Chen et al.

Multi-frame human pose estimation has long been a compelling and fundamental problem in computer vision. This task is challenging due to fast motion and pose occlusion that frequently occur in videos. State-of-the-art methods strive to incorporate additional visual evidences from neighboring frames (supporting frames) to facilitate the pose estimation of the current frame (key frame). One aspect that has been obviated so far, is the fact that current methods directly aggregate unaligned contexts across frames. The spatial-misalignment between pose features of the current frame and neighboring frames might lead to unsatisfactory results. More importantly, existing approaches build upon the straightforward pose estimation loss, which unfortunately cannot constrain the network to fully leverage useful information from neighboring frames. To tackle these problems, we present a novel hierarchical alignment framework, which leverages coarse-to-fine deformations to progressively update a neighboring frame to align with the current frame at the feature level. We further propose to explicitly supervise the knowledge extraction from neighboring frames, guaranteeing that useful complementary cues are extracted. To achieve this goal, we theoretically analyzed the mutual information between the frames and arrived at a loss that maximizes the task-relevant mutual information. These allow us to rank No.1 in the Multi-frame Person Pose Estimation Challenge on benchmark dataset PoseTrack2017, and obtain state-of-the-art performance on benchmarks Sub-JHMDB and Pose-Track2018. Our code is released at https://github. com/Pose-Group/FAMI-Pose, hoping that it will be useful to the community.

Samson B. Akintoye, Liangxiu Han, Huw Lloyd et al.

Deep Neural Network (DNN) models are usually trained sequentially from one layer to another, which causes forward, backward and update locking's problems, leading to poor performance in terms of training time. The existing parallel strategies to mitigate these problems provide suboptimal runtime performance. In this work, we have proposed a novel layer-wise partitioning and merging, forward and backward pass parallel framework to provide better training performance. The novelty of the proposed work consists of 1) a layer-wise partition and merging model which can minimise communication overhead between devices without the memory cost of existing strategies during the training process; 2) a forward pass and backward pass parallelisation and optimisation to address the update locking problem and minimise the total training cost. The experimental evaluation on real use cases shows that the proposed method outperforms the state-of-the-art approaches in terms of training speed; and achieves almost linear speedup without compromising the accuracy performance of the non-parallel approach.

Haoming Chen, Runyang Feng, Sifan Wu et al.

Human pose estimation aims at localizing human anatomical keypoints or body parts in the input data (e.g., images, videos, or signals). It forms a crucial component in enabling machines to have an insightful understanding of the behaviors of humans, and has become a salient problem in computer vision and related fields. Deep learning techniques allow learning feature representations directly from the data, significantly pushing the performance boundary of human pose estimation. In this paper, we reap the recent achievements of 2D human pose estimation methods and present a comprehensive survey. Briefly, existing approaches put their efforts in three directions, namely network architecture design, network training refinement, and post processing. Network architecture design looks at the architecture of human pose estimation models, extracting more robust features for keypoint recognition and localization. Network training refinement tap into the training of neural networks and aims to improve the representational ability of models. Post processing further incorporates model-agnostic polishing strategies to improve the performance of keypoint detection. More than 200 research contributions are involved in this survey, covering methodological frameworks, common benchmark datasets, evaluation metrics, and performance comparisons. We seek to provide researchers with a more comprehensive and systematic review on human pose estimation, allowing them to acquire a grand panorama and better identify future directions.

Haoming Chen, Zhizhong Zhang, Yanyun Qu et al.

An effective pre-training framework with universal 3D representations is extremely desired in perceiving large-scale dynamic scenes. However, establishing such an ideal framework that is both task-generic and label-efficient poses a challenge in unifying the representation of the same primitive across diverse scenes. The current contrastive 3D pre-training methods typically follow a frame-level consistency, which focuses on the 2D-3D relationships in each detached image. Such inconsiderate consistency greatly hampers the promising path of reaching an universal pre-training framework: (1) The cross-scene semantic self-conflict, i.e., the intense collision between primitive segments of the same semantics from different scenes; (2) Lacking a globally unified bond that pushes the cross-scene semantic consistency into 3D representation learning. To address above challenges, we propose a CSC framework that puts a scene-level semantic consistency in the heart, bridging the connection of the similar semantic segments across various scenes. To achieve this goal, we combine the coherent semantic cues provided by the vision foundation model and the knowledge-rich cross-scene prototypes derived from the complementary multi-modality information. These allow us to train a universal 3D pre-training model that facilitates various downstream tasks with less fine-tuning efforts. Empirically, we achieve consistent improvements over SOTA pre-training approaches in semantic segmentation (+1.4% mIoU), object detection (+1.0% mAP), and panoptic segmentation (+3.0% PQ) using their task-specific 3D network on nuScenes. Code is released at https://github.com/chenhaomingbob/CSC, hoping to inspire future research.

Runyang Feng, Haoming Chen

Temporal modeling and spatio-temporal collaboration are pivotal techniques for video-based human pose estimation. Most state-of-the-art methods adopt optical flow or temporal difference, learning local visual content correspondence across frames at the pixel level, to capture motion dynamics. However, such a paradigm essentially relies on localized pixel-to-pixel similarity, which neglects the semantical correlations among frames and is vulnerable to image quality degradations (e.g. occlusions or blur). Moreover, existing approaches often combine motion and spatial (appearance) features via simple concatenation or summation, leading to practical challenges in fully leveraging these distinct modalities. In this paper, we present a novel framework that learns multi-level semantical dynamics and dense spatio-temporal collaboration for multi-frame human pose estimation. Specifically, we first design a Multi-Level Semantic Motion Encoder using a multi-masked context and pose reconstruction strategy. This strategy stimulates the model to explore multi-granularity spatiotemporal semantic relationships among frames by progressively masking the features of (patch) cubes and frames. We further introduce a Spatial-Motion Mutual Learning module which densely propagates and consolidates context information from spatial and motion features to enhance the capability of the model. Extensive experiments demonstrate that our approach sets new state-of-the-art results on three benchmark datasets, PoseTrack2017, PoseTrack2018, and PoseTrack21.

Xin Zhang, Liangxiu Han, Tam Sobeih et al.

Accurate and rapid detection of COVID-19 pneumonia is crucial for optimal patient treatment. Chest X-Ray (CXR) is the first line imaging test for COVID-19 pneumonia diagnosis as it is fast, cheap and easily accessible. Inspired by the success of deep learning (DL) in computer vision, many DL-models have been proposed to detect COVID-19 pneumonia using CXR images. Unfortunately, these deep classifiers lack the transparency in interpreting findings, which may limit their applications in clinical practice. The existing commonly used visual explanation methods are either too noisy or imprecise, with low resolution, and hence are unsuitable for diagnostic purposes. In this work, we propose a novel explainable deep learning framework (CXRNet) for accurate COVID-19 pneumonia detection with an enhanced pixel-level visual explanation from CXR images. The proposed framework is based on a new Encoder-Decoder-Encoder multitask architecture, allowing for both disease classification and visual explanation. The method has been evaluated on real world CXR datasets from both public and private data sources, including: healthy, bacterial pneumonia, viral pneumonia and COVID-19 pneumonia cases The experimental results demonstrate that the proposed method can achieve a satisfactory level of accuracy and provide fine-resolution classification activation maps for visual explanation in lung disease detection. The Average Accuracy, the Precision, Recall and F1-score of COVID-19 pneumonia reached 0.879, 0.985, 0.992 and 0.989, respectively. We have also found that using lung segmented (CXR) images can help improve the performance of the model. The proposed method can provide more detailed high resolution visual explanation for the classification decision, compared to current state-of-the-art visual explanation methods and has a great potential to be used in clinical practice for COVID-19 pneumonia diagnosis.

Zhenguang Liu, Haoming Chen, Runyang Feng et al.

Multi-frame human pose estimation in complicated situations is challenging. Although state-of-the-art human joints detectors have demonstrated remarkable results for static images, their performances come short when we apply these models to video sequences. Prevalent shortcomings include the failure to handle motion blur, video defocus, or pose occlusions, arising from the inability in capturing the temporal dependency among video frames. On the other hand, directly employing conventional recurrent neural networks incurs empirical difficulties in modeling spatial contexts, especially for dealing with pose occlusions. In this paper, we propose a novel multi-frame human pose estimation framework, leveraging abundant temporal cues between video frames to facilitate keypoint detection. Three modular components are designed in our framework. A Pose Temporal Merger encodes keypoint spatiotemporal context to generate effective searching scopes while a Pose Residual Fusion module computes weighted pose residuals in dual directions. These are then processed via our Pose Correction Network for efficient refining of pose estimations. Our method ranks No.1 in the Multi-frame Person Pose Estimation Challenge on the large-scale benchmark datasets PoseTrack2017 and PoseTrack2018. We have released our code, hoping to inspire future research.