Ke Zhang

Yuncheng Zhou, Ke Zhang, Xinzhe Luo et al.

Pathological area segmentation in cardiac magnetic resonance (MR) images plays a vital role in the clinical diagnosis of cardiovascular diseases. Because of the irregular shape and small area, pathological segmentation has always been a challenging task. We propose an anatomy prior based framework, which combines the U-net segmentation network with the attention technique. Leveraging the fact that the pathology is inclusive, we propose a neighborhood penalty strategy to gauge the inclusion relationship between the myocardium and the myocardial infarction and no-reflow areas. This neighborhood penalty strategy can be applied to any two labels with inclusive relationships (such as the whole infarction and myocardium, etc.) to form a neighboring loss. The proposed framework is evaluated on the EMIDEC dataset. Results show that our framework is effective in pathological area segmentation.

Ke Zhang, Xiahai Zhuang

In this paper, we study the problem of imaging orientation in cardiac MRI, and propose a framework to categorize the orientation for recognition and standardization via deep neural networks. The method uses a new multi-tasking strategy, where both the tasks of cardiac segmentation and orientation recognition are simultaneously achieved. For multiple sequences and modalities of MRI, we propose a transfer learning strategy, which adapts our proposed model from a single modality to multiple modalities. We embed the orientation recognition network in a Cardiac MRI Orientation Adjust Tool, i.e., CMRadjustNet. We implemented two versions of CMRadjustNet, including a user-interface (UI) software, and a command-line tool. The former version supports MRI image visualization, orientation prediction, adjustment, and storage operations; and the latter version enables the batch operations. The source code, neural network models and tools have been released and open via https://zmiclab.github.io/projects.html.