Yuhe Gao

Runxue Bao, Yiming Sun, Yuhe Gao et al.

The application of transfer learning, leveraging knowledge from source domains to enhance model performance in a target domain, has significantly grown, supporting diverse real-world applications. Its success often relies on shared knowledge between domains, typically required in these methodologies. Commonly, methods assume identical feature and label spaces in both domains, known as homogeneous transfer learning. However, this is often impractical as source and target domains usually differ in these spaces, making precise data matching challenging and costly. Consequently, heterogeneous transfer learning (HTL), which addresses these disparities, has become a vital strategy in various tasks. In this paper, we offer an extensive review of over 60 HTL methods, covering both data-based and model-based approaches. We describe the key assumptions and algorithms of these methods and systematically categorize them into instance-based, feature representation-based, parameter regularization, and parameter tuning techniques. Additionally, we explore applications in natural language processing, computer vision, multimodal learning, and biomedicine, aiming to deepen understanding and stimulate further research in these areas. Our paper includes recent advancements in HTL, such as the introduction of transformer-based models and multimodal learning techniques, ensuring the review captures the latest developments in the field. We identify key limitations in current HTL studies and offer systematic guidance for future research, highlighting areas needing further exploration and suggesting potential directions for advancing the field.

Yuelyu Ji, Yuhe Gao, Runxue Bao et al.

The coronavirus disease 2019 (COVID-19) has led to a global pandemic of significant severity. In addition to its high level of contagiousness, COVID-19 can have a heterogeneous clinical course, ranging from asymptomatic carriers to severe and potentially life-threatening health complications. Many patients have to revisit the emergency room (ER) within a short time after discharge, which significantly increases the workload for medical staff. Early identification of such patients is crucial for helping physicians focus on treating life-threatening cases. In this study, we obtained Electronic Health Records (EHRs) of 3,210 encounters from 13 affiliated ERs within the University of Pittsburgh Medical Center between March 2020 and January 2021. We leveraged a Natural Language Processing technique, ScispaCy, to extract clinical concepts and used the 1001 most frequent concepts to develop 7-day revisit models for COVID-19 patients in ERs. The research data we collected from 13 ERs may have distributional differences that could affect the model development. To address this issue, we employed a classic deep transfer learning method called the Domain Adversarial Neural Network (DANN) and evaluated different modeling strategies, including the Multi-DANN algorithm, the Single-DANN algorithm, and three baseline methods. Results showed that the Multi-DANN models outperformed the Single-DANN models and baseline models in predicting revisits of COVID-19 patients to the ER within 7 days after discharge. Notably, the Multi-DANN strategy effectively addressed the heterogeneity among multiple source domains and improved the adaptation of source data to the target domain. Moreover, the high performance of Multi-DANN models indicates that EHRs are informative for developing a prediction model to identify COVID-19 patients who are very likely to revisit an ER within 7 days after discharge.

Yuhe Gao, Chengchun Shi, Rui Song

Dynamic treatment regimes assign personalized treatments to patients sequentially over time based on their baseline information and time-varying covariates. In mobile health applications, these covariates are typically collected at different frequencies over a long time horizon. In this paper, we propose a deep spectral Q-learning algorithm, which integrates principal component analysis (PCA) with deep Q-learning to handle the mixed frequency data. In theory, we prove that the mean return under the estimated optimal policy converges to that under the optimal one and establish its rate of convergence. The usefulness of our proposal is further illustrated via simulations and an application to a diabetes dataset.

Yuhe Gao, Runxue Bao, Yuelyu Ji et al.

Knowledge sharing is crucial in healthcare, especially when leveraging data from multiple clinical sites to address data scarcity, reduce costs, and enable timely interventions. Transfer learning can facilitate cross-site knowledge transfer, but a major challenge is heterogeneity in clinical concepts across different sites. Large Language Models (LLMs) show significant potential of capturing the semantic meaning of clinical concepts and reducing heterogeneity. This study analyzed electronic health records from two large healthcare systems to assess the impact of semantic embeddings from LLMs on local, shared, and transfer learning models. Results indicate that domain-specific LLMs, such as Med-BERT, consistently outperform in local and direct transfer scenarios, while generic models like OpenAI embeddings require fine-tuning for optimal performance. However, excessive tuning of models with biomedical embeddings may reduce effectiveness, emphasizing the need for balance. This study highlights the importance of domain-specific embeddings and careful model tuning for effective knowledge transfer in healthcare.

Haitao Jiang, Lin Ge, Yuhe Gao et al.

Large Language Models (LLMs) have shown their success in language understanding and reasoning on general topics. However, their capability to perform inference based on user-specified structured data and knowledge in corpus-rare concepts, such as causal decision-making is still limited. In this work, we explore the possibility of fine-tuning an open-sourced LLM into LLM4Causal, which can identify the causal task, execute a corresponding function, and interpret its numerical results based on users' queries and the provided dataset. Meanwhile, we propose a data generation process for more controllable GPT prompting and present two instruction-tuning datasets: (1) Causal-Retrieval-Bench for causal problem identification and input parameter extraction for causal function calling and (2) Causal-Interpret-Bench for in-context causal interpretation. By conducting end-to-end evaluations and two ablation studies, we showed that LLM4Causal can deliver end-to-end solutions for causal problems and provide easy-to-understand answers, which significantly outperforms the baselines.

Yahui Bai, Yuhe Gao, Runzhe Wan et al.

In recent years, there has been a growing trend of applying Reinforcement Learning (RL) in financial applications. This approach has shown great potential to solve decision-making tasks in finance. In this survey, we present a comprehensive study of the applications of RL in finance and conduct a series of meta-analyses to investigate the common themes in the literature, such as the factors that most significantly affect RL's performance compared to traditional methods. Moreover, we identify challenges including explainability, Markov Decision Process (MDP) modeling, and robustness that hinder the broader utilization of RL in the financial industry and discuss recent advancements in overcoming these challenges. Finally, we propose future research directions, such as benchmarking, contextual RL, multi-agent RL, and model-based RL to address these challenges and to further enhance the implementation of RL in finance.

Yiming Sun, Yuhe Gao, Runxue Bao et al.

Transfer learning has become a pivotal technique in machine learning and has proven to be effective in various real-world applications. However, utilizing this technique for classification tasks with sequential data often faces challenges, primarily attributed to the scarcity of class labels. To address this challenge, we introduce Multi-Source Adaptive Weighting (MSAW), an online multi-source transfer learning method. MSAW integrates a dynamic weighting mechanism into an ensemble framework, enabling automatic adjustment of weights based on the relevance and contribution of each source (representing historical knowledge) and target model (learning from newly acquired data). We demonstrate the effectiveness of MSAW by applying it to detect Respiratory Syncytial Virus cases within Emergency Department visits, utilizing multiple years of electronic health records from the University of Pittsburgh Medical Center. Our method demonstrates performance improvements over many baselines, including refining pre-trained models with online learning as well as three static weighting approaches, showing MSAW's capacity to integrate historical knowledge with progressively accumulated new data. This study indicates the potential of online transfer learning in healthcare, particularly for developing machine learning models that dynamically adapt to evolving situations where new data is incrementally accumulated.

Feng Shi, Haochen Li, Yuhe Gao et al.

The reconfigurability, energy-efficiency, and massive parallelism on FPGAs make them one of the best choices for implementing efficient deep learning accelerators. However, state-of-art implementations seldom consider the balance between high throughput of computation power and the ability of the memory subsystem to support it. In this paper, we implement an accelerator on FPGA by combining the sparse Winograd convolution, clusters of small-scale systolic arrays, and a tailored memory layout design. We also provide an analytical model analysis for the general Winograd convolution algorithm as a design reference. Experimental results on VGG16 show that it achieves very high computational resource utilization, 20x ~ 30x energy efficiency, and more than 5x speedup compared with the dense implementation.