Qi Li

h-index6
2papers
90citations

2 Papers

10.3IVJul 8, 2024Code
Nonrigid Reconstruction of Freehand Ultrasound without a Tracker

Qi Li, Ziyi Shen, Qianye Yang et al.

Reconstructing 2D freehand Ultrasound (US) frames into 3D space without using a tracker has recently seen advances with deep learning. Predicting good frame-to-frame rigid transformations is often accepted as the learning objective, especially when the ground-truth labels from spatial tracking devices are inherently rigid transformations. Motivated by a) the observed nonrigid deformation due to soft tissue motion during scanning, and b) the highly sensitive prediction of rigid transformation, this study investigates the methods and their benefits in predicting nonrigid transformations for reconstructing 3D US. We propose a novel co-optimisation algorithm for simultaneously estimating rigid transformations among US frames, supervised by ground-truth from a tracker, and a nonrigid deformation, optimised by a regularised registration network. We show that these two objectives can be either optimised using meta-learning or combined by weighting. A fast scattered data interpolation is also developed for enabling frequent reconstruction and registration of non-parallel US frames, during training. With a new data set containing over 357,000 frames in 720 scans, acquired from 60 subjects, the experiments demonstrate that, due to an expanded thus easier-to-optimise solution space, the generalisation is improved with the added deformation estimation, with respect to the rigid ground-truth. The global pixel reconstruction error (assessing accumulative prediction) is lowered from 18.48 to 16.51 mm, compared with baseline rigid-transformation-predicting methods. Using manually identified landmarks, the proposed co-optimisation also shows potentials in compensating nonrigid tissue motion at inference, which is not measurable by tracker-provided ground-truth. The code and data used in this paper are made publicly available at https://github.com/QiLi111/NR-Rec-FUS.

13.4IVJun 26, 2025
TUS-REC2024: A Challenge to Reconstruct 3D Freehand Ultrasound Without External Tracker

Qi Li, Shaheer U. Saeed, Yuliang Huang et al.

Trackerless freehand ultrasound reconstruction aims to reconstruct 3D volumes from sequences of 2D ultrasound images without relying on external tracking systems. By eliminating the need for optical or electromagnetic trackers, this approach offers a low-cost, portable, and widely deployable alternative to more expensive volumetric ultrasound imaging systems, particularly valuable in resource-constrained clinical settings. However, predicting long-distance transformations and handling complex probe trajectories remain challenging. The TUS-REC2024 Challenge establishes the first benchmark for trackerless 3D freehand ultrasound reconstruction by providing a large publicly available dataset, along with a baseline model and a rigorous evaluation framework. By the submission deadline, the Challenge had attracted 43 registered teams, of which 6 teams submitted 21 valid dockerized solutions. The submitted methods span a wide range of approaches, including the state space model, the recurrent model, the registration-driven volume refinement, the attention mechanism, and the physics-informed model. This paper provides a comprehensive background introduction and literature review in the field, presents an overview of the challenge design and dataset, and offers a comparative analysis of submitted methods across multiple evaluation metrics. These analyses highlight both the progress and the current limitations of state-of-the-art approaches in this domain and provide insights for future research directions. All data and code are publicly available to facilitate ongoing development and reproducibility. As a live and evolving benchmark, it is designed to be continuously iterated and improved. The Challenge was held at MICCAI 2024 and is organised again at MICCAI 2025, reflecting its sustained commitment to advancing this field.