Coordinate-based Speed of Sound Recovery for Aberration-Corrected Photoacoustic Computed TomographyTianao Li, Manxiu Cui, Cheng Ma et al.
Photoacoustic computed tomography (PACT) is a non-invasive imaging modality, similar to ultrasound, with wide-ranging medical applications. Conventional PACT images are degraded by wavefront distortion caused by the heterogeneous speed of sound (SOS) in tissue. Accounting for these effects can improve image quality and provide medically useful information, but measuring the SOS directly is burdensome and the existing joint reconstruction method is computationally expensive. Traditional supervised learning techniques are currently inaccessible in this data-starved domain. In this work, we introduce an efficient, self-supervised joint reconstruction method that recovers SOS and high-quality images for ring array PACT systems. To solve this semi-blind inverse problem, we parametrize the SOS using either a pixel grid or a neural field (NF) and update it directly by backpropagating the gradients through a differentiable imaging forward model. Our method removes SOS aberrations more accurately and 35x faster than the current SOTA. We demonstrate the success of our method quantitatively in simulation and qualitatively on experimentally-collected and in vivo data. Our code and synthetic numerical phantoms are available on our project page: https://lukeli0425.github.io/Coord-SoS-PACT/.
3.7CVApr 11, 2024
Streamlined Photoacoustic Image Processing with Foundation Models: A Training-Free SolutionHandi Deng, Yucheng Zhou, Jiaxuan Xiang et al.
Foundation models have rapidly evolved and have achieved significant accomplishments in computer vision tasks. Specifically, the prompt mechanism conveniently allows users to integrate image prior information into the model, making it possible to apply models without any training. Therefore, we propose a method based on foundation models and zero training to solve the tasks of photoacoustic (PA) image segmentation. We employed the segment anything model (SAM) by setting simple prompts and integrating the model's outputs with prior knowledge of the imaged objects to accomplish various tasks, including: (1) removing the skin signal in three-dimensional PA image rendering; (2) dual speed-of-sound reconstruction, and (3) segmentation of finger blood vessels. Through these demonstrations, we have concluded that deep learning can be directly applied in PA imaging without the requirement for network design and training. This potentially allows for a hands-on, convenient approach to achieving efficient and accurate segmentation of PA images. This letter serves as a comprehensive tutorial, facilitating the mastery of the technique through the provision of code and sample datasets.
2.0IVDec 28, 2019
Transfer Learning in General Lensless Imaging through Scattering MediaYukuan Yang, Lei Deng, Peng Jiao et al.
Recently deep neural networks (DNNs) have been successfully introduced to the field of lensless imaging through scattering media. By solving an inverse problem in computational imaging, DNNs can overcome several shortcomings in the conventional lensless imaging through scattering media methods, namely, high cost, poor quality, complex control, and poor anti-interference. However, for training, a large number of training samples on various datasets have to be collected, with a DNN trained on one dataset generally performing poorly for recovering images from another dataset. The underlying reason is that lensless imaging through scattering media is a high dimensional regression problem and it is difficult to obtain an analytical solution. In this work, transfer learning is proposed to address this issue. Our main idea is to train a DNN on a relatively complex dataset using a large number of training samples and fine-tune the last few layers using very few samples from other datasets. Instead of the thousands of samples required to train from scratch, transfer learning alleviates the problem of costly data acquisition. Specifically, considering the difference in sample sizes and similarity among datasets, we propose two DNN architectures, namely LISMU-FCN and LISMU-OCN, and a balance loss function designed for balancing smoothness and sharpness. LISMU-FCN, with much fewer parameters, can achieve imaging across similar datasets while LISMU-OCN can achieve imaging across significantly different datasets. What's more, we establish a set of simulation algorithms which are close to the real experiment, and it is of great significance and practical value in the research on lensless scattering imaging. In summary, this work provides a new solution for lensless imaging through scattering media using transfer learning in DNNs.