Hariharan Ramasubramanian

Hariharan Ramasubramanian, Alvaro Vazquez-Mayagoitia, Ganesh Sivaraman et al.

Machine learning interatomic potentials (MLIPs) have revolutionized the modeling of materials and molecules by directly fitting to ab initio data. However, while these models excel at capturing local and semi-local interactions, they often prove insufficient when an explicit and efficient treatment of long-range interactions is required. To address this limitation, we introduce Reciprocal-Space Attention (RSA), a framework designed to capture long-range interactions in the Fourier domain. RSA can be integrated with any existing local or semi-local MLIP framework. The central contribution of this work is the mapping of a linear-scaling attention mechanism into Fourier space, enabling the explicit modeling of long-range interactions such as electrostatics and dispersion without relying on predefined charges or other empirical assumptions. We demonstrate the effectiveness of our method as a long-range correction to the MACE backbone across diverse benchmarks, including dimer binding curves, dispersion-dominated layered phosphorene exfoliation, and the molecular dipole density of bulk water. Our results show that RSA consistently captures long-range physics across a broad range of chemical and materials systems. The code and datasets for this work is available at https://github.com/rfhari/reciprocal_space_attention

Rishikesh Magar, Yuyang Wang, Cooper Lorsung et al.

Machine learning (ML) has demonstrated the promise for accurate and efficient property prediction of molecules and crystalline materials. To develop highly accurate ML models for chemical structure property prediction, datasets with sufficient samples are required. However, obtaining clean and sufficient data of chemical properties can be expensive and time-consuming, which greatly limits the performance of ML models. Inspired by the success of data augmentations in computer vision and natural language processing, we developed AugLiChem: the data augmentation library for chemical structures. Augmentation methods for both crystalline systems and molecules are introduced, which can be utilized for fingerprint-based ML models and Graph Neural Networks(GNNs). We show that using our augmentation strategies significantly improves the performance of ML models, especially when using GNNs. In addition, the augmentations that we developed can be used as a direct plug-in module during training and have demonstrated the effectiveness when implemented with different GNN models through the AugliChem library. The Python-based package for our implementation of Auglichem: Data augmentation library for chemical structures, is publicly available at: https://github.com/BaratiLab/AugLiChem.