Matthew J. Vowels

Matthew J. Vowels

Causal inference is a crucial goal of science, enabling researchers to arrive at meaningful conclusions regarding the predictions of hypothetical interventions using observational data. Path models, Structural Equation Models (SEMs), and, more generally, Directed Acyclic Graphs (DAGs), provide a means to unambiguously specify assumptions regarding the causal structure underlying a phenomenon. Unlike DAGs, which make very few assumptions about the functional and parametric form, SEM assumes linearity. This can result in functional misspecification which prevents researchers from undertaking reliable effect size estimation. In contrast, we propose Super Learner Equation Modeling, a path modeling technique integrating machine learning Super Learner ensembles. We empirically demonstrate its ability to provide consistent and unbiased estimates of causal effects, its competitive performance for linear models when compared with SEM, and highlight its superiority over SEM when dealing with non-linear relationships. We provide open-source code, and a tutorial notebook with example usage, accentuating the easy-to-use nature of the method.

Guillaume Rochette, Mathieu Rochat, Matthew J. Vowels

psifx is a plug-and-play multi-modal feature extraction toolkit, aiming to facilitate and democratize the use of state-of-the-art machine learning techniques for human sciences research. It is motivated by a need (a) to automate and standardize data annotation processes that typically require expensive, lengthy, and inconsistent human labour; (b) to develop and distribute open-source community-driven psychology research software; and (c) to enable large-scale access and ease of use for non-expert users. The framework contains an array of tools for tasks such as speaker diarization, closed-caption transcription and translation from audio; body, hand, and facial pose estimation and gaze tracking with multi-person tracking from video; and interactive textual feature extraction supported by large language models. The package has been designed with a modular and task-oriented approach, enabling the community to add or update new tools easily. This combination creates new opportunities for in-depth study of real-time behavioral phenomena in psychological and social science research.

Sina Akbari, Fateme Jamshidi, Ehsan Mokhtarian et al.

Causal identification is at the core of the causal inference literature, where complete algorithms have been proposed to identify causal queries of interest. The validity of these algorithms hinges on the restrictive assumption of having access to a correctly specified causal structure. In this work, we study the setting where a probabilistic model of the causal structure is available. Specifically, the edges in a causal graph exist with uncertainties which may, for example, represent degree of belief from domain experts. Alternatively, the uncertainty about an edge may reflect the confidence of a particular statistical test. The question that naturally arises in this setting is: Given such a probabilistic graph and a specific causal effect of interest, what is the subgraph which has the highest plausibility and for which the causal effect is identifiable? We show that answering this question reduces to solving an NP-complete combinatorial optimization problem which we call the edge ID problem. We propose efficient algorithms to approximate this problem and evaluate them against both real-world networks and randomly generated graphs.

Matthew J. Vowels, Mathieu Rochat, Sina Akbari

Artificial Neural Networks (ANNs), including fully-connected networks and transformers, are highly flexible and powerful function approximators, widely applied in fields like computer vision and natural language processing. However, their inability to inherently respect causal structures can limit their robustness, making them vulnerable to covariate shift and difficult to interpret/explain. This poses significant challenges for their reliability in real-world applications. In this paper, we introduce Causal Fully-Connected Neural Networks (CFCNs) and Causal Transformers (CaTs), two general model families designed to operate under predefined causal constraints, as specified by a Directed Acyclic Graph (DAG). These models retain the powerful function approximation abilities of traditional neural networks while adhering to the underlying structural constraints, improving robustness, reliability, and interpretability at inference time. This approach opens new avenues for deploying neural networks in more demanding, real-world scenarios where robustness and explainability is critical.

Matthew J. Vowels

Machine Learning explainability techniques have been proposed as a means of `explaining' or interrogating a model in order to understand why a particular decision or prediction has been made. Such an ability is especially important at a time when machine learning is being used to automate decision processes which concern sensitive factors and legal outcomes. Indeed, it is even a requirement according to EU law. Furthermore, researchers concerned with imposing overly restrictive functional form (e.g., as would be the case in a linear regression) may be motivated to use machine learning algorithms in conjunction with explainability techniques, as part of exploratory research, with the goal of identifying important variables which are associated with an outcome of interest. For example, epidemiologists might be interested in identifying `risk factors' - i.e. factors which affect recovery from disease - by using random forests and assessing variable relevance using importance measures. However, and as we demonstrate, machine learning algorithms are not as flexible as they might seem, and are instead incredibly sensitive to the underling causal structure in the data. The consequences of this are that predictors which are, in fact, critical to a causal system and highly correlated with the outcome, may nonetheless be deemed by explainability techniques to be unrelated/unimportant/unpredictive of the outcome. Rather than this being a limitation of explainability techniques per se, we show that it is rather a consequence of the mathematical implications of regression, and the interaction of these implications with the associated conditional independencies of the underlying causal structure. We provide some alternative recommendations for researchers wanting to explore the data for important variables.

Matthew J. Vowels, Sina Akbari, Necati Cihan Camgoz et al.

Parameter estimation in empirical fields is usually undertaken using parametric models, and such models readily facilitate statistical inference. Unfortunately, they are unlikely to be sufficiently flexible to be able to adequately model real-world phenomena, and may yield biased estimates. Conversely, non-parametric approaches are flexible but do not readily facilitate statistical inference and may still exhibit residual bias. We explore the potential for Influence Functions (IFs) to (a) improve initial estimators without needing more data (b) increase model robustness and (c) facilitate statistical inference. We begin with a broad introduction to IFs, and propose a neural network method 'MultiNet', which seeks the diversity of an ensemble using a single architecture. We also introduce variants on the IF update step which we call 'MultiStep', and provide a comprehensive evaluation of different approaches. The improvements are found to be dataset dependent, indicating an interaction between the methods used and nature of the data generating process. Our experiments highlight the need for practitioners to check the consistency of their findings, potentially by undertaking multiple analyses with different combinations of estimators. We also show that it is possible to improve existing neural networks for `free', without needing more data, and without needing to retrain them.

Matthew J. Vowels, Necati Cihan Camgoz, Richard Bowden

An important goal across most scientific fields is the discovery of causal structures underling a set of observations. Unfortunately, causal discovery methods which are based on correlation or mutual information can often fail to identify causal links in systems which exhibit dynamic relationships. Such dynamic systems (including the famous coupled logistic map) exhibit `mirage' correlations which appear and disappear depending on the observation window. This means not only that correlation is not causation but, perhaps counter-intuitively, that causation may occur without correlation. In this paper we describe Neural Shadow-Mapping, a neural network based method which embeds high-dimensional video data into a low-dimensional shadow representation, for subsequent estimation of causal links. We demonstrate its performance at discovering causal links from video-representations of dynamic systems.

Matthew J. Vowels, Necati Cihan Camgoz, Richard Bowden

Disentangled representations support a range of downstream tasks including causal reasoning, generative modeling, and fair machine learning. Unfortunately, disentanglement has been shown to be impossible without the incorporation of supervision or inductive bias. Given that supervision is often expensive or infeasible to acquire, we choose to incorporate structural inductive bias and present an unsupervised, deep State-Space-Model for Video Disentanglement (VDSM). The model disentangles latent time-varying and dynamic factors via the incorporation of hierarchical structure with a dynamic prior and a Mixture of Experts decoder. VDSM learns separate disentangled representations for the identity of the object or person in the video, and for the action being performed. We evaluate VDSM across a range of qualitative and quantitative tasks including identity and dynamics transfer, sequence generation, Fréchet Inception Distance, and factor classification. VDSM provides state-of-the-art performance and exceeds adversarial methods, even when the methods use additional supervision.

Matthew J. Vowels, Necati Cihan Camgoz, Richard Bowden

Causal reasoning is a crucial part of science and human intelligence. In order to discover causal relationships from data, we need structure discovery methods. We provide a review of background theory and a survey of methods for structure discovery. We primarily focus on modern, continuous optimization methods, and provide reference to further resources such as benchmark datasets and software packages. Finally, we discuss the assumptive leap required to take us from structure to causality.

Matthew J. Vowels, Necati Cihan Camgoz, Richard Bowden

Fair and unbiased machine learning is an important and active field of research, as decision processes are increasingly driven by models that learn from data. Unfortunately, any biases present in the data may be learned by the model, thereby inappropriately transferring that bias into the decision making process. We identify the connection between the task of bias reduction and that of isolating factors common between domains whilst encouraging domain specific invariance. To isolate the common factors we combine the theory of deep latent variable models with information bottleneck theory for scenarios whereby data may be naturally paired across domains and no additional supervision is required. The result is the Nested Variational AutoEncoder (NestedVAE). Two outer VAEs with shared weights attempt to reconstruct the input and infer a latent space, whilst a nested VAE attempts to reconstruct the latent representation of one image, from the latent representation of its paired image. In so doing, the nested VAE isolates the common latent factors/causes and becomes invariant to unwanted factors that are not shared between paired images. We also propose a new metric to provide a balanced method of evaluating consistency and classifier performance across domains which we refer to as the Adjusted Parity metric. An evaluation of NestedVAE on both domain and attribute invariance, change detection, and learning common factors for the prediction of biological sex demonstrates that NestedVAE significantly outperforms alternative methods.

Matthew J. Vowels, Necati Cihan Camgoz, Richard Bowden

Variational AutoEncoders (VAEs) provide a means to generate representational latent embeddings. Previous research has highlighted the benefits of achieving representations that are disentangled, particularly for downstream tasks. However, there is some debate about how to encourage disentanglement with VAEs and evidence indicates that existing implementations of VAEs do not achieve disentanglement consistently. The evaluation of how well a VAE's latent space has been disentangled is often evaluated against our subjective expectations of which attributes should be disentangled for a given problem. Therefore, by definition, we already have domain knowledge of what should be achieved and yet we use unsupervised approaches to achieve it. We propose a weakly-supervised approach that incorporates any available domain knowledge into the training process to form a Gated-VAE. The process involves partitioning the representational embedding and gating backpropagation. All partitions are utilised on the forward pass but gradients are backpropagated through different partitions according to selected image/target pairings. The approach can be used to modify existing VAE models such as beta-VAE, InfoVAE and DIP-VAE-II. Experiments demonstrate that using gated backpropagation, latent factors are represented in their intended partition. The approach is applied to images of faces for the purpose of disentangling head-pose from facial expression. Quantitative metrics show that using Gated-VAE improves average disentanglement, completeness and informativeness, as compared with un-gated implementations. Qualitative assessment of latent traversals demonstrate its disentanglement of head-pose from expression, even when only weak/noisy supervision is available.