Mladen Nikolić

LG
h-index12
13papers
231citations
Novelty51%
AI Score32

13 Papers

14.9LGJun 8, 2023
Interpretable Medical Diagnostics with Structured Data Extraction by Large Language Models

Aleksa Bisercic, Mladen Nikolic, Mihaela van der Schaar et al.

Tabular data is often hidden in text, particularly in medical diagnostic reports. Traditional machine learning (ML) models designed to work with tabular data, cannot effectively process information in such form. On the other hand, large language models (LLMs) which excel at textual tasks, are probably not the best tool for modeling tabular data. Therefore, we propose a novel, simple, and effective methodology for extracting structured tabular data from textual medical reports, called TEMED-LLM. Drawing upon the reasoning capabilities of LLMs, TEMED-LLM goes beyond traditional extraction techniques, accurately inferring tabular features, even when their names are not explicitly mentioned in the text. This is achieved by combining domain-specific reasoning guidelines with a proposed data validation and reasoning correction feedback loop. By applying interpretable ML models such as decision trees and logistic regression over the extracted and validated data, we obtain end-to-end interpretable predictions. We demonstrate that our approach significantly outperforms state-of-the-art text classification models in medical diagnostics. Given its predictive performance, simplicity, and interpretability, TEMED-LLM underscores the potential of leveraging LLMs to improve the performance and trustworthiness of ML models in medical applications.

5.3LGNov 16, 2023
Tabular Few-Shot Generalization Across Heterogeneous Feature Spaces

Max Zhu, Katarzyna Kobalczyk, Andrija Petrovic et al.

Despite the prevalence of tabular datasets, few-shot learning remains under-explored within this domain. Existing few-shot methods are not directly applicable to tabular datasets due to varying column relationships, meanings, and permutational invariance. To address these challenges, we propose FLAT-a novel approach to tabular few-shot learning, encompassing knowledge sharing between datasets with heterogeneous feature spaces. Utilizing an encoder inspired by Dataset2Vec, FLAT learns low-dimensional embeddings of datasets and their individual columns, which facilitate knowledge transfer and generalization to previously unseen datasets. A decoder network parametrizes the predictive target network, implemented as a Graph Attention Network, to accommodate the heterogeneous nature of tabular datasets. Experiments on a diverse collection of 118 UCI datasets demonstrate FLAT's successful generalization to new tabular datasets and a considerable improvement over the baselines.

2.5AIJun 13, 2022
Intrinsically motivated option learning: a comparative study of recent methods

Djordje Božić, Predrag Tadić, Mladen Nikolić

Options represent a framework for reasoning across multiple time scales in reinforcement learning (RL). With the recent active interest in the unsupervised learning paradigm in the RL research community, the option framework was adapted to utilize the concept of empowerment, which corresponds to the amount of influence the agent has on the environment and its ability to perceive this influence, and which can be optimized without any supervision provided by the environment's reward structure. Many recent papers modify this concept in various ways achieving commendable results. Through these various modifications, however, the initial context of empowerment is often lost. In this work we offer a comparative study of such papers through the lens of the original empowerment principle.

6.4LGSep 2, 2024Code
Logit Scaling for Out-of-Distribution Detection

Andrija Djurisic, Rosanne Liu, Mladen Nikolic

The safe deployment of machine learning and AI models in open-world settings hinges critically on the ability to detect out-of-distribution (OOD) data accurately, data samples that contrast vastly from what the model was trained with. Current approaches to OOD detection often require further training the model, and/or statistics about the training data which may no longer be accessible. Additionally, many existing OOD detection methods struggle to maintain performance when transferred across different architectures. Our research tackles these issues by proposing a simple, post-hoc method that does not require access to the training data distribution, keeps a trained network intact, and holds strong performance across a variety of architectures. Our method, Logit Scaling (LTS), as the name suggests, simply scales the logits in a manner that effectively distinguishes between in-distribution (ID) and OOD samples. We tested our method on benchmarks across various scales, including CIFAR-10, CIFAR-100, ImageNet and OpenOOD. The experiments cover 3 ID and 14 OOD datasets, as well as 9 model architectures. Overall, we demonstrate state-of-the-art performance, robustness and adaptability across different architectures, paving the way towards a universally applicable solution for advanced OOD detection.

6.6LGNov 20, 2023
Incorporating LLM Priors into Tabular Learners

Max Zhu, Siniša Stanivuk, Andrija Petrovic et al.

We present a method to integrate Large Language Models (LLMs) and traditional tabular data classification techniques, addressing LLMs challenges like data serialization sensitivity and biases. We introduce two strategies utilizing LLMs for ranking categorical variables and generating priors on correlations between continuous variables and targets, enhancing performance in few-shot scenarios. We focus on Logistic Regression, introducing MonotonicLR that employs a non-linear monotonic function for mapping ordinals to cardinals while preserving LLM-determined orders. Validation against baseline models reveals the superior performance of our approach, especially in low-data scenarios, while remaining interpretable.

14.4AIJun 29, 2012Code
Software Verification and Graph Similarity for Automated Evaluation of Students' Assignments

Milena Vujosevic-Janicic, Mladen Nikolic, Dusan Tosic et al.

In this paper we promote introducing software verification and control flow graph similarity measurement in automated evaluation of students' programs. We present a new grading framework that merges results obtained by combination of these two approaches with results obtained by automated testing, leading to improved quality and precision of automated grading. These two approaches are also useful in providing a comprehensible feedback that can help students to improve the quality of their programs We also present our corresponding tools that are publicly available and open source. The tools are based on LLVM low-level intermediate code representation, so they could be applied to a number of programming languages. Experimental evaluation of the proposed grading framework is performed on a corpus of university students' programs written in programming language C. Results of the experiments show that automatically generated grades are highly correlated with manually determined grades suggesting that the presented tools can find real-world applications in studying and grading.

10.5CVFeb 15, 2024Code
Beyond Kalman Filters: Deep Learning-Based Filters for Improved Object Tracking

Momir Adžemović, Predrag Tadić, Andrija Petrović et al.

Traditional tracking-by-detection systems typically employ Kalman filters (KF) for state estimation. However, the KF requires domain-specific design choices and it is ill-suited to handling non-linear motion patterns. To address these limitations, we propose two innovative data-driven filtering methods. Our first method employs a Bayesian filter with a trainable motion model to predict an object's future location and combines its predictions with observations gained from an object detector to enhance bounding box prediction accuracy. Moreover, it dispenses with most domain-specific design choices characteristic of the KF. The second method, an end-to-end trainable filter, goes a step further by learning to correct detector errors, further minimizing the need for domain expertise. Additionally, we introduce a range of motion model architectures based on Recurrent Neural Networks, Neural Ordinary Differential Equations, and Conditional Neural Processes, that are combined with the proposed filtering methods. Our extensive evaluation across multiple datasets demonstrates that our proposed filters outperform the traditional KF in object tracking, especially in the case of non-linear motion patterns -- the use case our filters are best suited to. We also conduct noise robustness analysis of our filters with convincing positive results. We further propose a new cost function for associating observations with tracks. Our tracker, which incorporates this new association cost with our proposed filters, outperforms the conventional SORT method and other motion-based trackers in multi-object tracking according to multiple metrics on motion-rich DanceTrack and SportsMOT datasets.

6.5CVJun 30, 2024
Engineering an Efficient Object Tracker for Non-Linear Motion

Momir Adžemović, Predrag Tadić, Andrija Petrović et al.

The goal of multi-object tracking is to detect and track all objects in a scene while maintaining unique identifiers for each, by associating their bounding boxes across video frames. This association relies on matching motion and appearance patterns of detected objects. This task is especially hard in case of scenarios involving dynamic and non-linear motion patterns. In this paper, we introduce DeepMoveSORT, a novel, carefully engineered multi-object tracker designed specifically for such scenarios. In addition to standard methods of appearance-based association, we improve motion-based association by employing deep learnable filters (instead of the most commonly used Kalman filter) and a rich set of newly proposed heuristics. Our improvements to motion-based association methods are severalfold. First, we propose a new transformer-based filter architecture, TransFilter, which uses an object's motion history for both motion prediction and noise filtering. We further enhance the filter's performance by careful handling of its motion history and accounting for camera motion. Second, we propose a set of heuristics that exploit cues from the position, shape, and confidence of detected bounding boxes to improve association performance. Our experimental evaluation demonstrates that DeepMoveSORT outperforms existing trackers in scenarios featuring non-linear motion, surpassing state-of-the-art results on three such datasets. We also perform a thorough ablation study to evaluate the contributions of different tracker components which we proposed. Based on our study, we conclude that using a learnable filter instead of the Kalman filter, along with appearance-based association is key to achieving strong general tracking performance.

17.9LGOct 11, 2021
Neural Algorithmic Reasoners are Implicit Planners

Andreea Deac, Petar Veličković, Ognjen Milinković et al.

Implicit planning has emerged as an elegant technique for combining learned models of the world with end-to-end model-free reinforcement learning. We study the class of implicit planners inspired by value iteration, an algorithm that is guaranteed to yield perfect policies in fully-specified tabular environments. We find that prior approaches either assume that the environment is provided in such a tabular form -- which is highly restrictive -- or infer "local neighbourhoods" of states to run value iteration over -- for which we discover an algorithmic bottleneck effect. This effect is caused by explicitly running the planning algorithm based on scalar predictions in every state, which can be harmful to data efficiency if such scalars are improperly predicted. We propose eXecuted Latent Value Iteration Networks (XLVINs), which alleviate the above limitations. Our method performs all planning computations in a high-dimensional latent space, breaking the algorithmic bottleneck. It maintains alignment with value iteration by carefully leveraging neural graph-algorithmic reasoning and contrastive self-supervised learning. Across eight low-data settings -- including classical control, navigation and Atari -- XLVINs provide significant improvements to data efficiency against value iteration-based implicit planners, as well as relevant model-free baselines. Lastly, we empirically verify that XLVINs can closely align with value iteration.

12.8LGOct 25, 2020
XLVIN: eXecuted Latent Value Iteration Nets

Andreea Deac, Petar Veličković, Ognjen Milinković et al.

Value Iteration Networks (VINs) have emerged as a popular method to incorporate planning algorithms within deep reinforcement learning, enabling performance improvements on tasks requiring long-range reasoning and understanding of environment dynamics. This came with several limitations, however: the model is not incentivised in any way to perform meaningful planning computations, the underlying state space is assumed to be discrete, and the Markov decision process (MDP) is assumed fixed and known. We propose eXecuted Latent Value Iteration Networks (XLVINs), which combine recent developments across contrastive self-supervised learning, graph representation learning and neural algorithmic reasoning to alleviate all of the above limitations, successfully deploying VIN-style models on generic environments. XLVINs match the performance of VIN-like models when the underlying MDP is discrete, fixed and known, and provides significant improvements to model-free baselines across three general MDP setups.

5.8LGJul 24, 2020
Hierarchical Protein Function Prediction with Tail-GNNs

Stefan Spalević, Petar Veličković, Jovana Kovačević et al.

Protein function prediction may be framed as predicting subgraphs (with certain closure properties) of a directed acyclic graph describing the hierarchy of protein functions. Graph neural networks (GNNs), with their built-in inductive bias for relational data, are hence naturally suited for this task. However, in contrast with most GNN applications, the graph is not related to the input, but to the label space. Accordingly, we propose Tail-GNNs, neural networks which naturally compose with the output space of any neural network for multi-task prediction, to provide relationally-reinforced labels. For protein function prediction, we combine a Tail-GNN with a dilated convolutional network which learns representations of the protein sequence, making significant improvement in F_1 score and demonstrating the ability of Tail-GNNs to learn useful representations of labels and exploit them in real-world problem solving.

8.1LGJun 16, 2019Code
MoËT: Mixture of Expert Trees and its Application to Verifiable Reinforcement Learning

Marko Vasic, Andrija Petrovic, Kaiyuan Wang et al.

Rapid advancements in deep learning have led to many recent breakthroughs. While deep learning models achieve superior performance, often statistically better than humans, their adoption into safety-critical settings, such as healthcare or self-driving cars is hindered by their inability to provide safety guarantees or to expose the inner workings of the model in a human understandable form. We present MoËT, a novel model based on Mixture of Experts, consisting of decision tree experts and a generalized linear model gating function. Thanks to such gating function the model is more expressive than the standard decision tree. To support non-differentiable decision trees as experts, we formulate a novel training procedure. In addition, we introduce a hard thresholding version, MoËTH, in which predictions are made solely by a single expert chosen via the gating function. Thanks to that property, MoËTH allows each prediction to be easily decomposed into a set of logical rules in a form which can be easily verified. While MoËT is a general use model, we illustrate its power in the reinforcement learning setting. By training MoËT models using an imitation learning procedure on deep RL agents we outperform the previous state-of-the-art technique based on decision trees while preserving the verifiability of the models. Moreover, we show that MoËT can also be used in real-world supervised problems on which it outperforms other verifiable machine learning models.

2.9AIMay 8, 2015
Short Portfolio Training for CSP Solving

Mirko Stojadinović, Mladen Nikolić, Filip Marić

Many different approaches for solving Constraint Satisfaction Problems (CSPs) and related Constraint Optimization Problems (COPs) exist. However, there is no single solver (nor approach) that performs well on all classes of problems and many portfolio approaches for selecting a suitable solver based on simple syntactic features of the input CSP instance have been developed. In this paper we first present a simple portfolio method for CSP based on k-nearest neighbors method. Then, we propose a new way of using portfolio systems --- training them shortly in the exploitation time, specifically for the set of instances to be solved and using them on that set. Thorough evaluation has been performed and has shown that the approach yields good results. We evaluated several machine learning techniques for our portfolio. Due to its simplicity and efficiency, the selected k-nearest neighbors method is especially suited for our short training approach and it also yields the best results among the tested methods. We also confirm that our approach yields good results on SAT domain.