Zhenqi He

Zhenqi He, Mathias Unberath, Jing Ke et al.

Nuclei appear small in size, yet, in real clinical practice, the global spatial information and correlation of the color or brightness contrast between nuclei and background, have been considered a crucial component for accurate nuclei segmentation. However, the field of automatic nuclei segmentation is dominated by Convolutional Neural Networks (CNNs), meanwhile, the potential of the recently prevalent Transformers has not been fully explored, which is powerful in capturing local-global correlations. To this end, we make the first attempt at a pure Transformer framework for nuclei segmentation, called TransNuSeg. Different from prior work, we decouple the challenging nuclei segmentation task into an intrinsic multi-task learning task, where a tri-decoder structure is employed for nuclei instance, nuclei edge, and clustered edge segmentation respectively. To eliminate the divergent predictions from different branches in previous work, a novel self distillation loss is introduced to explicitly impose consistency regulation between branches. Moreover, to formulate the high correlation between branches and also reduce the number of parameters, an efficient attention sharing scheme is proposed by partially sharing the self-attention heads amongst the tri-decoders. Finally, a token MLP bottleneck replaces the over-parameterized Transformer bottleneck for a further reduction in model complexity. Experiments on two datasets of different modalities, including MoNuSeg have shown that our methods can outperform state-of-the-art counterparts such as CA2.5-Net by 2-3% Dice with 30% fewer parameters. In conclusion, TransNuSeg confirms the strength of Transformer in the context of nuclei segmentation, which thus can serve as an efficient solution for real clinical practice. Code is available at https://github.com/zhenqi-he/transnuseg.

Zhenqi He, Junjun He, Jin Ye et al.

Histological whole slide images (WSIs) can be usually compromised by artifacts, such as tissue folding and bubbles, which will increase the examination difficulty for both pathologists and Computer-Aided Diagnosis (CAD) systems. Existing approaches to restoring artifact images are confined to Generative Adversarial Networks (GANs), where the restoration process is formulated as an image-to-image transfer. Those methods are prone to suffer from mode collapse and unexpected mistransfer in the stain style, leading to unsatisfied and unrealistic restored images. Innovatively, we make the first attempt at a denoising diffusion probabilistic model for histological artifact restoration, namely ArtiFusion.Specifically, ArtiFusion formulates the artifact region restoration as a gradual denoising process, and its training relies solely on artifact-free images to simplify the training complexity.Furthermore, to capture local-global correlations in the regional artifact restoration, a novel Swin-Transformer denoising architecture is designed, along with a time token scheme. Our extensive evaluations demonstrate the effectiveness of ArtiFusion as a pre-processing method for histology analysis, which can successfully preserve the tissue structures and stain style in artifact-free regions during the restoration. Code is available at https://github.com/zhenqi-he/ArtiFusion.

Lin Li, Ziqi Jiang, Gefan Ye et al.

Recent advances in cross-modal few-shot adaptation treat visual-semantic alignment as a continuous feature transport problem via Flow Matching (FM). However, we argue that Euclidean-based FM overlooks fundamental limitations of flat geometry, where polynomial volume growth fails to accommodate diverse feature distributions, leading to severe path entanglement. To this end, we propose path-decoupled Hyperbolic Flow Matching (HFM), leveraging the Lorentz manifold's exponential expansion for trajectory decoupling. HFM structures the transport via two key designs: 1) Centripetal hyperbolic alignment: It constructs a centripetal hierarchy by anchoring textual roots, which pushes visual leaves to the boundary to initialize orderly flows. 2) Path-decoupled objective: It acts as a ``semantic guardrail'' rigidly confining trajectories within isolated class-specific geodesic corridors via step-wise supervision. Furthermore, we devise an adaptive diameter-based stopping to prevent over-transportation into the crowded origin based on the intrinsic semantic scale. Extensive ablations on 11 benchmarks have shown that HFM establishes a new state-of-the-art, consistently outperforming its Euclidean counterparts. Our codes and models will be released.

Yanghao Wang, Hongxu Chen, Jiazhen Liu et al.

The prevalent dual-branch paradigm, i.e., training a side network to encode visual conditions and fusing its intermediate-layer features to a frozen pretrained main network, has shown remarkable success in visual-condition controllable generation. Despite its widespread adoption, the role of the side branch and its training efficiency remain underexplored. In this paper, we first revisit this mainstream paradigm through the lens of score-based generative modeling: 1) The main network preserves visual perceptual quality by providing a prior unconditional score. 2) The side network steers conditional control by implicitly contributing a likelihood score. Guided by this perspective, we propose LIkelihood Score Alignment (LISA), an effective regularization method that explicitly aligns the intermediate feature of the side network with an approximated likelihood score. Specifically, we first hook features from a designated layer of the side network and project them into the score latent space by a lightweight decoder. Then, we construct an approximated likelihood score target and calculate the distance between the decoder's output and this target as an additional regularization loss. Finally, we jointly optimize the side network and decoder with both standard diffusion loss and our regularization loss. Experiments across various image/video tasks, architectures, and diffusion/flow models demonstrated that LISA can not only consistently accelerate the training convergence and improve final synthetic results, but also encourage the side network's features to be more disentangled for conditional modeling with negligible additional training cost and zero extra inference cost.

Zhenqi He, Lin Li, Long Chen

Compositional zero-shot learning (CZSL) aims to recognize unseen attribute-object compositions by recombining primitives learned from seen pairs. Recent CZSL methods built on vision-language models (VLMs) typically adopt parameter-efficient fine-tuning (PEFT). They apply visual disentanglers for decomposition and manipulate token-level prompts or prefixes to encode compositions. However, such PEFT-based designs suffer from two fundamental limitations: (1) Implicit Composition Construction, where composition is realized only via token concatenation or branch-wise prompt tuning rather than an explicit operation in the embedding space; (2) Remained Feature Entanglement, where imperfect disentanglement leaves attribute, object, and composition features mutually contaminated. Together, these issues limit the generalization ability of current CZSL models. In this paper, we are the first to systematically study flow matching for CZSL and introduce FlowComposer, a model-agnostic framework that learns two primitive flows to transport visual features toward attribute and object text embeddings, and a learnable Composer that explicitly fuses their velocity fields into a composition flow. To exploit the inevitable residual entanglement, we further devise a leakage-guided augmentation scheme that reuses leaked features as auxiliary signals. We thoroughly evaluate FlowComposer on three public CZSL benchmarks by integrating it as a plug-and-play component into various baselines, consistently achieving significant improvements.

Zhenqi He, Yuanpei Liu, Kai Han

This paper investigates the problem of Generalized Category Discovery (GCD). Given a partially labelled dataset, GCD aims to categorize all unlabelled images, regardless of whether they belong to known or unknown classes. Existing approaches typically depend on either single-level semantics or manually designed abstract hierarchies, which limit their generalizability and scalability. To address these limitations, we introduce a SEmantic-aware hierArchical Learning framework (SEAL), guided by naturally occurring and easily accessible hierarchical structures. Within SEAL, we propose a Hierarchical Semantic-Guided Soft Contrastive Learning approach that exploits hierarchical similarity to generate informative soft negatives, addressing the limitations of conventional contrastive losses that treat all negatives equally. Furthermore, a Cross-Granularity Consistency (CGC) module is designed to align the predictions from different levels of granularity. SEAL consistently achieves state-of-the-art performance on fine-grained benchmarks, including the SSB benchmark, Oxford-Pet, and the Herbarium19 dataset, and further demonstrates generalization on coarse-grained datasets. Project page: https://visual-ai.github.io/seal/

Yang Yao, Lingyu Li, Jiaxin Song et al.

As Multimodal Large Language Models (MLLMs) continue to evolve, their cognitive and reasoning capabilities have seen remarkable progress. However, challenges in visual fine-grained perception and commonsense causal inference persist. This paper introduces Argus Inspection, a multimodal benchmark with two levels of difficulty, emphasizing detailed visual recognition while incorporating real-world commonsense understanding to evaluate causal reasoning abilities. Expanding on it, we present the Eye of Panoptes framework, which integrates a binary parametric Sigmoid metric with an indicator function, enabling a more holistic evaluation of MLLMs' responses in opinion-based reasoning tasks. Experiments conducted on 26 mainstream MLLMs reveal that the highest performance in visual fine-grained reasoning reaches only 0.46, highlighting considerable potential for enhancement. Our research offers valuable perspectives for the continued refinement of MLLMs.