Yansen Wang

Yu-Ting Lan, Kan Ren, Yansen Wang et al. · cmu, tsinghua

Seeing is believing, however, the underlying mechanism of how human visual perceptions are intertwined with our cognitions is still a mystery. Thanks to the recent advances in both neuroscience and artificial intelligence, we have been able to record the visually evoked brain activities and mimic the visual perception ability through computational approaches. In this paper, we pay attention to visual stimuli reconstruction by reconstructing the observed images based on portably accessible brain signals, i.e., electroencephalography (EEG) data. Since EEG signals are dynamic in the time-series format and are notorious to be noisy, processing and extracting useful information requires more dedicated efforts; In this paper, we propose a comprehensive pipeline, named NeuroImagen, for reconstructing visual stimuli images from EEG signals. Specifically, we incorporate a novel multi-level perceptual information decoding to draw multi-grained outputs from the given EEG data. A latent diffusion model will then leverage the extracted information to reconstruct the high-resolution visual stimuli images. The experimental results have illustrated the effectiveness of image reconstruction and superior quantitative performance of our proposed method.

Wei-Bang Jiang, Yansen Wang, Bao-Liang Lu et al. · cmu, tsinghua

Recent advancements for large-scale pre-training with neural signals such as electroencephalogram (EEG) have shown promising results, significantly boosting the development of brain-computer interfaces (BCIs) and healthcare. However, these pre-trained models often require full fine-tuning on each downstream task to achieve substantial improvements, limiting their versatility and usability, and leading to considerable resource wastage. To tackle these challenges, we propose NeuroLM, the first multi-task foundation model that leverages the capabilities of Large Language Models (LLMs) by regarding EEG signals as a foreign language, endowing the model with multi-task learning and inference capabilities. Our approach begins with learning a text-aligned neural tokenizer through vector-quantized temporal-frequency prediction, which encodes EEG signals into discrete neural tokens. These EEG tokens, generated by the frozen vector-quantized (VQ) encoder, are then fed into an LLM that learns causal EEG information via multi-channel autoregression. Consequently, NeuroLM can understand both EEG and language modalities. Finally, multi-task instruction tuning adapts NeuroLM to various downstream tasks. We are the first to demonstrate that, by specific incorporation with LLMs, NeuroLM unifies diverse EEG tasks within a single model through instruction tuning. The largest variant NeuroLM-XL has record-breaking 1.7B parameters for EEG signal processing, and is pre-trained on a large-scale corpus comprising approximately 25,000-hour EEG data. When evaluated on six diverse downstream datasets, NeuroLM showcases the huge potential of this multi-task learning paradigm.

Ziyue Li, Yuchen Fang, You Li et al. · cmu, tsinghua

A timely detection of seizures for newborn infants with electroencephalogram (EEG) has been a common yet life-saving practice in the Neonatal Intensive Care Unit (NICU). However, it requires great human efforts for real-time monitoring, which calls for automated solutions to neonatal seizure detection. Moreover, the current automated methods focusing on adult epilepsy monitoring often fail due to (i) dynamic seizure onset location in human brains; (ii) different montages on neonates and (iii) huge distribution shift among different subjects. In this paper, we propose a deep learning framework, namely STATENet, to address the exclusive challenges with exquisite designs at the temporal, spatial and model levels. The experiments over the real-world large-scale neonatal EEG dataset illustrate that our framework achieves significantly better seizure detection performance.

Yuan Lu, Dongqi Han, Yansen Wang et al. · cmu, tsinghua

Diffusion planners are a strong approach for offline reinforcement learning, but they can fail when value-guided selection favours trajectories that score well yet are locally inconsistent with the environment dynamics, resulting in brittle execution. We propose Self-supervised Action Gating with Energies (SAGE), an inference-time re-ranking method that penalises dynamically inconsistent plans using a latent consistency signal. SAGE trains a Joint-Embedding Predictive Architecture (JEPA) encoder on offline state sequences and an action-conditioned latent predictor for short horizon transitions. At test time, SAGE assigns each sampled candidate an energy given by its latent prediction error and combines this feasibility score with value estimates to select actions. SAGE can integrate into existing diffusion planning pipelines that can sample trajectories and select actions via value scoring; it requires no environment rollouts and no policy re-training. Across locomotion, navigation, and manipulation benchmarks, SAGE improves the performance and robustness of diffusion planners.

Junwen Luo, Chengyong Jiang, Qingyuan Chen et al. · cmu, tsinghua

Effective visual brain-machine interfaces (BMI) is based on reliable and stable EEG biomarkers. However, traditional adaptive filter-based approaches may suffer from individual variations in EEG signals, while deep neural network-based approaches may be hindered by the non-stationarity of EEG signals caused by biomarker attenuation and background oscillations. To address these challenges, we propose the Visual Evoked Potential Booster (VEP Booster), a novel closed-loop AI framework that generates reliable and stable EEG biomarkers under visual stimulation protocols. Our system leverages an image generator to refine stimulus images based on real-time feedback from human EEG signals, generating visual stimuli tailored to the preferences of primary visual cortex (V1) neurons and enabling effective targeting of neurons most responsive to stimuli. We validated our approach by implementing a system and employing steady-state visual evoked potential (SSVEP) visual protocols in five human subjects. Our results show significant enhancements in the reliability and utility of EEG biomarkers for all individuals, with the largest improvement in SSVEP response being 105%, the smallest being 28%, and the average increase being 76.5%. These promising results have implications for both clinical and technological applications

Ruoxi Shi, Xinyang Jiang, Caihua Shan et al.

Vector graphics (VG) have been ubiquitous in our daily life with vast applications in engineering, architecture, designs, etc. The VG recognition process of most existing methods is to first render the VG into raster graphics (RG) and then conduct recognition based on RG formats. However, this procedure discards the structure of geometries and loses the high resolution of VG. Recently, another category of algorithms is proposed to recognize directly from the original VG format. But it is affected by the topological errors that can be filtered out by RG rendering. Instead of looking at one format, it is a good solution to utilize the formats of VG and RG together to avoid these shortcomings. Besides, we argue that the VG-to-RG rendering process is essential to effectively combine VG and RG information. By specifying the rules on how to transfer VG primitives to RG pixels, the rendering process depicts the interaction and correlation between VG and RG. As a result, we propose RendNet, a unified architecture for recognition on both 2D and 3D scenarios, which considers both VG/RG representations and exploits their interaction by incorporating the VG-to-RG rasterization process. Experiments show that RendNet can achieve state-of-the-art performance on 2D and 3D object recognition tasks on various VG datasets.

Junyu Pan, Yansen Wang, Enze Zhang et al.

Leveraging the universal representations of pre-trained LLMs and MLLMs offers a promising path toward brain foundation models. However, visually-evoked EEG datasets remain scarce, leading existing methods to align neural signals mainly with abstract text, a lossy translation that may discard fine-grained perceptual information encoded in brain activity. We propose Generative Visual Grounding (GVG), a framework that visualizes the invisible by using an EEG-to-image generative model as a visual translator. Instead of forcing EEG into text alone, GVG hallucinates instance-specific proxy images for non-visual EEG, providing structured visual contexts that allow MLLMs to exploit their visual priors for clinical-state interpretation. We validate this idea on two MLLM backbones, GVG-X-Omni and GVG-Janus. Image-only alignment is already competitive: the lightweight GVG-X-Omni matches 1.7B-parameter text-aligned baselines while tuning only 170M parameters on a frozen 7B backbone. We further extend GVG-Janus with trimodal Image+Text alignment, where text supplies categorical semantic anchors and visual proxies enrich neural representations with perceptual details. Experiments show consistent gains in EEG understanding and visual generation, suggesting visual proxy grounding as an effective complement to textual alignment.

Mingqing Xiao, Yansen Wang, Dongqi Han et al.

Spatiotemporal neural dynamics and oscillatory synchronization are widely implicated in biological information processing and have been hypothesized to support flexible coordination such as feature binding. By contrast, most deep learning architectures represent and propagate information through activation values, neglecting the joint dynamics of rate and phase. In this work, we introduce Kuramoto oscillatory Phase Encoding (KoPE) as an additional, evolving phase state to Vision Transformers, incorporating a neuro-inspired synchronization mechanism to advance learning efficiency. We show that KoPE can improve training, parameter, and data efficiency of vision models through synchronization-enhanced structure learning. Moreover, KoPE benefits tasks requiring structured understanding, including semantic and panoptic segmentation, representation alignment with language, and few-shot abstract visual reasoning (ARC-AGI). Theoretical analysis and empirical verification further suggest that KoPE can accelerate attention concentration for learning efficiency. These results indicate that synchronization can serve as a scalable, neuro-inspired mechanism for advancing state-of-the-art neural network models.

Kaitao Song, Xiaohua Wang, Xu Tan et al. · cmu, microsoft-research

In this paper, we propose a novel learning paradigm, termed Chain-of-Model (CoM), which incorporates the causal relationship into the hidden states of each layer as a chain style, thereby introducing great scaling efficiency in model training and inference flexibility in deployment. We introduce the concept of Chain-of-Representation (CoR), which formulates the hidden states at each layer as a combination of multiple sub-representations (i.e., chains) at the hidden dimension level. In each layer, each chain from the output representations can only view all of its preceding chains in the input representations. Consequently, the model built upon CoM framework can progressively scale up the model size by increasing the chains based on the previous models (i.e., chains), and offer multiple sub-models at varying sizes for elastic inference by using different chain numbers. Based on this principle, we devise Chain-of-Language-Model (CoLM), which incorporates the idea of CoM into each layer of Transformer architecture. Based on CoLM, we further introduce CoLM-Air by introducing a KV sharing mechanism, that computes all keys and values within the first chain and then shares across all chains. This design demonstrates additional extensibility, such as enabling seamless LM switching, prefilling acceleration and so on. Experimental results demonstrate our CoLM family can achieve comparable performance to the standard Transformer, while simultaneously enabling greater flexiblity, such as progressive scaling to improve training efficiency and offer multiple varying model sizes for elastic inference, paving a a new way toward building language models. Our code will be released in the future at: https://github.com/microsoft/CoLM.

Yuqi Chen, Kan Ren, Yansen Wang et al. · cmu, tsinghua

Modeling continuous-time dynamics on irregular time series is critical to account for data evolution and correlations that occur continuously. Traditional methods including recurrent neural networks or Transformer models leverage inductive bias via powerful neural architectures to capture complex patterns. However, due to their discrete characteristic, they have limitations in generalizing to continuous-time data paradigms. Though neural ordinary differential equations (Neural ODEs) and their variants have shown promising results in dealing with irregular time series, they often fail to capture the intricate correlations within these sequences. It is challenging yet demanding to concurrently model the relationship between input data points and capture the dynamic changes of the continuous-time system. To tackle this problem, we propose ContiFormer that extends the relation modeling of vanilla Transformer to the continuous-time domain, which explicitly incorporates the modeling abilities of continuous dynamics of Neural ODEs with the attention mechanism of Transformers. We mathematically characterize the expressive power of ContiFormer and illustrate that, by curated designs of function hypothesis, many Transformer variants specialized in irregular time series modeling can be covered as a special case of ContiFormer. A wide range of experiments on both synthetic and real-world datasets have illustrated the superior modeling capacities and prediction performance of ContiFormer on irregular time series data. The project link is https://seqml.github.io/contiformer/.

Yuqi Chen, Kan Ren, Kaitao Song et al. · cmu, tsinghua

Self-supervised learning has emerged as a highly effective approach in the fields of natural language processing and computer vision. It is also applicable to brain signals such as electroencephalography (EEG) data, given the abundance of available unlabeled data that exist in a wide spectrum of real-world medical applications ranging from seizure detection to wave analysis. The existing works leveraging self-supervised learning on EEG modeling mainly focus on pretraining upon each individual dataset corresponding to a single downstream task, which cannot leverage the power of abundant data, and they may derive sub-optimal solutions with a lack of generalization. Moreover, these methods rely on end-to-end model learning which is not easy for humans to understand. In this paper, we present a novel EEG foundation model, namely EEGFormer, pretrained on large-scale compound EEG data. The pretrained model cannot only learn universal representations on EEG signals with adaptable performance on various downstream tasks but also provide interpretable outcomes of the useful patterns within the data. To validate the effectiveness of our model, we extensively evaluate it on various downstream tasks and assess the performance under different transfer settings. Furthermore, we demonstrate how the learned model exhibits transferable anomaly detection performance and provides valuable interpretability of the acquired patterns via self-supervised learning.

Shentong Mo, Yansen Wang, Xufang Luo et al. · cmu, tsinghua

Visual Prompt Tuning (VPT) techniques have gained prominence for their capacity to adapt pre-trained Vision Transformers (ViTs) to downstream visual tasks using specialized learnable tokens termed as prompts. Contemporary VPT methodologies, especially when employed with self-supervised vision transformers, often default to the introduction of new learnable prompts or gated prompt tokens predominantly sourced from the model's previous block. A pivotal oversight in such approaches is their failure to harness the potential of long-range previous blocks as sources of prompts within each self-supervised ViT. To bridge this crucial gap, we introduce Long-term Spatial Prompt Tuning (LSPT) - a revolutionary approach to visual representation learning. Drawing inspiration from the intricacies of the human brain, LSPT ingeniously incorporates long-term gated prompts. This feature serves as temporal coding, curbing the risk of forgetting parameters acquired from earlier blocks. Further enhancing its prowess, LSPT brings into play patch tokens, serving as spatial coding. This is strategically designed to perpetually amass class-conscious features, thereby fortifying the model's prowess in distinguishing and identifying visual categories. To validate the efficacy of our proposed method, we engaged in rigorous experimentation across 5 FGVC and 19 VTAB-1K benchmarks. Our empirical findings underscore the superiority of LSPT, showcasing its ability to set new benchmarks in visual prompt tuning performance.

Shentong Mo, Xufang Luo, Yansen Wang et al. · cmu, tsinghua

Visual task adaptation has been demonstrated to be effective in adapting pre-trained Vision Transformers (ViTs) to general downstream visual tasks using specialized learnable layers or tokens. However, there is yet a large-scale benchmark to fully explore the effect of visual task adaptation on the realistic and important medical domain, particularly across diverse medical visual modalities, such as color images, X-ray, and CT. To close this gap, we present Med-VTAB, a large-scale Medical Visual Task Adaptation Benchmark consisting of 1.68 million medical images for diverse organs, modalities, and adaptation approaches. Based on Med-VTAB, we explore the scaling law of medical prompt tuning concerning tunable parameters and the generalizability of medical visual adaptation using non-medical/medical pre-train weights. Besides, we study the impact of patient ID out-of-distribution on medical visual adaptation, which is a real and challenging scenario. Furthermore, results from Med-VTAB indicate that a single pre-trained model falls short in medical task adaptation. Therefore, we introduce GMoE-Adapter, a novel method that combines medical and general pre-training weights through a gated mixture-of-experts adapter, achieving state-of-the-art results in medical visual task adaptation.

Yimu Zhang, Dongqi Han, Yansen Wang et al. · cmu, tsinghua

Spike sorting is an essential process in neural recording, which identifies and separates electrical signals from individual neurons recorded by electrodes in the brain, enabling researchers to study how specific neurons communicate and process information. Although there exist a number of spike sorting methods which have contributed to significant neuroscientific breakthroughs, many are heuristically designed, making it challenging to verify their correctness due to the difficulty of obtaining ground truth labels from real-world neural recordings. In this work, we explore a data-driven, deep learning-based approach. We begin by creating a large-scale dataset through electrophysiology simulations using biologically realistic computational models. We then present SimSort, a pretraining framework for spike sorting. Trained solely on simulated data, SimSort demonstrates zero-shot generalizability to real-world spike sorting tasks, yielding consistent improvements over existing methods across multiple benchmarks. These results highlight the potential of simulation-driven pretraining to enhance the robustness and scalability of spike sorting in experimental neuroscience.

Chen Wang, Yansen Wang, Dongqi Han et al. · cmu, tsinghua

Analyzing stereoelectroencephalography (SEEG) signals is critical for brain-computer interface (BCI) applications and neuroscience research, yet poses significant challenges due to the large number of input channels and their heterogeneous relevance. Traditional channel selection methods struggle to scale or provide meaningful interpretability for SEEG data. In this work, we propose EEGChaT, a novel Transformer-based channel selection module designed to automatically identify the most task-relevant channels in SEEG recordings. EEGChaT introduces Channel Aggregation Tokens (CATs) to aggregate information across channels, and leverages an improved Attention Rollout technique to compute interpretable, quantitative channel importance scores. We evaluate EEGChaT on the DuIN dataset, demonstrating that integrating EEGChaT with existing classification models consistently improves decoding accuracy, achieving up to 17\% absolute gains. Furthermore, the channel weights produced by EEGChaT show substantial overlap with manually selected channels, supporting the interpretability of the approach. Our results suggest that EEGChaT is an effective and generalizable solution for channel selection in high-dimensional SEEG analysis, offering both enhanced performance and insights into neural signal relevance.

Nie Lin, Yansen Wang, Dongqi Han et al. · cmu, tsinghua

The integration of brain-computer interfaces (BCIs), in particular electroencephalography (EEG), with artificial intelligence (AI) has shown tremendous promise in decoding human cognition and behavior from neural signals. In particular, the rise of multimodal AI models have brought new possibilities that have never been imagined before. Here, we present EgoBrain --the world's first large-scale, temporally aligned multimodal dataset that synchronizes egocentric vision and EEG of human brain over extended periods of time, establishing a new paradigm for human-centered behavior analysis. This dataset comprises 61 hours of synchronized 32-channel EEG recordings and first-person video from 40 participants engaged in 29 categories of daily activities. We then developed a muiltimodal learning framework to fuse EEG and vision for action understanding, validated across both cross-subject and cross-environment challenges, achieving an action recognition accuracy of 66.70%. EgoBrain paves the way for a unified framework for brain-computer interface with multiple modalities. All data, tools, and acquisition protocols are openly shared to foster open science in cognitive computing.

Baoyu Jing, Yansen Wang, Guoxin Sui et al.

In recent years, Contrastive Learning (CL) has become a predominant representation learning paradigm for time series. Most existing methods manually build specific CL Strategies (CLS) by human heuristics for certain datasets and tasks. However, manually developing CLS usually requires excessive prior knowledge about the data, and massive experiments to determine the detailed CL configurations. In this paper, we present an Automated Machine Learning (AutoML) practice at Microsoft, which automatically learns CLS for time series datasets and tasks, namely Automated Contrastive Learning (AutoCL). We first construct a principled search space of size over $3\times10^{12}$, covering data augmentation, embedding transformation, contrastive pair construction, and contrastive losses. Further, we introduce an efficient reinforcement learning algorithm, which optimizes CLS from the performance on the validation tasks, to obtain effective CLS within the space. Experimental results on various real-world datasets demonstrate that AutoCL could automatically find the suitable CLS for the given dataset and task. From the candidate CLS found by AutoCL on several public datasets/tasks, we compose a transferable Generally Good Strategy (GGS), which has a strong performance for other datasets. We also provide empirical analysis as a guide for the future design of CLS.

Xiaopeng Lu, Zhen Fan, Yansen Wang et al.

As an important task in multimodal context understanding, Text-VQA (Visual Question Answering) aims at question answering through reading text information in images. It differentiates from the original VQA task as Text-VQA requires large amounts of scene-text relationship understanding, in addition to the cross-modal grounding capability. In this paper, we propose Localize, Group, and Select (LOGOS), a novel model which attempts to tackle this problem from multiple aspects. LOGOS leverages two grounding tasks to better localize the key information of the image, utilizes scene text clustering to group individual OCR tokens, and learns to select the best answer from different sources of OCR (Optical Character Recognition) texts. Experiments show that LOGOS outperforms previous state-of-the-art methods on two Text-VQA benchmarks without using additional OCR annotation data. Ablation studies and analysis demonstrate the capability of LOGOS to bridge different modalities and better understand scene text.

Yansen Wang, Ying Shen, Zhun Liu et al.

Humans convey their intentions through the usage of both verbal and nonverbal behaviors during face-to-face communication. Speaker intentions often vary dynamically depending on different nonverbal contexts, such as vocal patterns and facial expressions. As a result, when modeling human language, it is essential to not only consider the literal meaning of the words but also the nonverbal contexts in which these words appear. To better model human language, we first model expressive nonverbal representations by analyzing the fine-grained visual and acoustic patterns that occur during word segments. In addition, we seek to capture the dynamic nature of nonverbal intents by shifting word representations based on the accompanying nonverbal behaviors. To this end, we propose the Recurrent Attended Variation Embedding Network (RAVEN) that models the fine-grained structure of nonverbal subword sequences and dynamically shifts word representations based on nonverbal cues. Our proposed model achieves competitive performance on two publicly available datasets for multimodal sentiment analysis and emotion recognition. We also visualize the shifted word representations in different nonverbal contexts and summarize common patterns regarding multimodal variations of word representations.

Jian Guan, Yansen Wang, Minlie Huang

Generating a reasonable ending for a given story context, i.e., story ending generation, is a strong indication of story comprehension. This task requires not only to understand the context clues which play an important role in planning the plot but also to handle implicit knowledge to make a reasonable, coherent story. In this paper, we devise a novel model for story ending generation. The model adopts an incremental encoding scheme to represent context clues which are spanning in the story context. In addition, commonsense knowledge is applied through multi-source attention to facilitate story comprehension, and thus to help generate coherent and reasonable endings. Through building context clues and using implicit knowledge, the model is able to produce reasonable story endings. context clues implied in the post and make the inference based on it. Automatic and manual evaluation shows that our model can generate more reasonable story endings than state-of-the-art baselines.

Yansen Wang, Chenyi Liu, Minlie Huang et al.

Asking good questions in large-scale, open-domain conversational systems is quite significant yet rather untouched. This task, substantially different from traditional question generation, requires to question not only with various patterns but also on diverse and relevant topics. We observe that a good question is a natural composition of {\it interrogatives}, {\it topic words}, and {\it ordinary words}. Interrogatives lexicalize the pattern of questioning, topic words address the key information for topic transition in dialogue, and ordinary words play syntactical and grammatical roles in making a natural sentence. We devise two typed decoders (\textit{soft typed decoder} and \textit{hard typed decoder}) in which a type distribution over the three types is estimated and used to modulate the final generation distribution. Extensive experiments show that the typed decoders outperform state-of-the-art baselines and can generate more meaningful questions.