Bomin Wang

Ke Zhang, Bomin Wang, Hangqi Zhou et al.

Curating fully annotated datasets for medical image segmentation is labour-intensive and expertise-demanding. To alleviate this problem, prior studies have explored scribble annotations for weakly supervised segmentation. Existing solutions mainly compute losses on annotated areas and generate pseudo labels by propagating annotations to adjacent regions. However, these methods often suffer from inaccurate and unrealistic segmentations due to insufficient supervision and incomplete shape information. In contrast, we first investigate the principle of good scribble annotations, which leads to efficient scribble forms via supervision maximization and randomness simulation. We further introduce regularization terms to encode the spatial relationship and the shape constraints, where the EM algorithm is utilized to estimate the mixture ratios of label classes. These ratios are critical in identifying the unlabeled pixels for each class and correcting erroneous predictions, thus the accurate estimation lays the foundation for the incorporation of spatial prior. Finally, we integrate the efficient scribble supervision with the prior into a framework, referred to as ZScribbleSeg, and apply it to multiple scenarios. Leveraging only scribble annotations, ZScribbleSeg achieves competitive performance on six segmentation tasks including ACDC, MSCMRseg, BTCV, MyoPS, Decathlon-BrainTumor and Decathlon-Prostate. Our code will be released via https://github.com/DLwbm123/ZScribbleSeg.

Bomin Wang, Xinzhe Luo, Xiahai Zhuang

Current deep learning approaches in medical image registration usually face the challenges of distribution shift and data collection, hindering real-world deployment. In contrast, universal medical image registration aims to perform registration on a wide range of clinically relevant tasks simultaneously, thus having tremendous potential for clinical applications. In this paper, we present the first attempt to achieve the goal of universal 3D medical image registration in sequential learning scenarios by proposing a continual learning method. Specifically, we utilize meta-learning with experience replay to mitigating the problem of catastrophic forgetting. To promote the generalizability of meta-continual learning, we further propose sharpness-aware meta-continual learning (SAMCL). We validate the effectiveness of our method on four datasets in a continual learning setup, including brain MR, abdomen CT, lung CT, and abdomen MR-CT image pairs. Results have shown the potential of SAMCL in realizing universal image registration, which performs better than or on par with vanilla sequential or centralized multi-task training strategies.The source code will be available from https://github.com/xzluo97/Continual-Reg.