IVMar 16, 2023
Fast 3D Volumetric Image Reconstruction from 2D MRI Slices by Parallel ProcessingSomoballi Ghoshal, Shremoyee Goswami, Amlan Chakrabarti et al.
Magnetic Resonance Imaging (MRI) is a technology for non-invasive imaging of anatomical features in detail. It can help in functional analysis of organs of a specimen but it is very costly. In this work, methods for (i) virtual three-dimensional (3D) reconstruction from a single sequence of two-dimensional (2D) slices of MR images of a human spine and brain along a single axis, and (ii) generation of missing inter-slice data are proposed. Our approach helps in preserving the edges, shape, size, as well as the internal tissue structures of the object being captured. The sequence of original 2D slices along a single axis is divided into smaller equal sub-parts which are then reconstructed using edge preserved kriging interpolation to predict the missing slice information. In order to speed up the process of interpolation, we have used multiprocessing by carrying out the initial interpolation on parallel cores. From the 3D matrix thus formed, shearlet transform is applied to estimate the edges considering the 2D blocks along the $Z$ axis, and to minimize the blurring effect using a proposed mean-median logic. Finally, for visualization, the sub-matrices are merged into a final 3D matrix. Next, the newly formed 3D matrix is split up into voxels and marching cubes method is applied to get the approximate 3D image for viewing. To the best of our knowledge it is a first of its kind approach based on kriging interpolation and multiprocessing for 3D reconstruction from 2D slices, and approximately 98.89\% accuracy is achieved with respect to similarity metrics for image comparison. The time required for reconstruction has also been reduced by approximately 70\% with multiprocessing even for a large input data set compared to that with single core processing.
IVMay 7, 2024
Lumbar Spine Tumor Segmentation and Localization in T2 MRI Images Using AIRikathi Pal, Sudeshna Mondal, Aditi Gupta et al.
In medical imaging, segmentation and localization of spinal tumors in three-dimensional (3D) space pose significant computational challenges, primarily stemming from limited data availability. In response, this study introduces a novel data augmentation technique, aimed at automating spine tumor segmentation and localization through AI approaches. Leveraging a fusion of fuzzy c-means clustering and Random Forest algorithms, the proposed method achieves successful spine tumor segmentation based on predefined masks initially delineated by domain experts in medical imaging. Subsequently, a Convolutional Neural Network (CNN) architecture is employed for tumor classification. Moreover, 3D vertebral segmentation and labeling techniques are used to help pinpoint the exact location of the tumors in the lumbar spine. Results indicate a remarkable performance, with 99% accuracy for tumor segmentation, 98% accuracy for tumor classification, and 99% accuracy for tumor localization achieved with the proposed approach. These metrics surpass the efficacy of existing state-of-the-art techniques, as evidenced by superior Dice Score, Class Accuracy, and Intersection over Union (IOU) on class accuracy metrics. This innovative methodology holds promise for enhancing the diagnostic capabilities in detecting and characterizing spinal tumors, thereby facilitating more effective clinical decision-making.
CVApr 28, 2024
Panoptic Segmentation and Labelling of Lumbar Spine Vertebrae using Modified Attention UnetRikathi Pal, Priya Saha, Somoballi Ghoshal et al.
Segmentation and labeling of vertebrae in MRI images of the spine are critical for the diagnosis of illnesses and abnormalities. These steps are indispensable as MRI technology provides detailed information about the tissue structure of the spine. Both supervised and unsupervised segmentation methods exist, yet acquiring sufficient data remains challenging for achieving high accuracy. In this study, we propose an enhancing approach based on modified attention U-Net architecture for panoptic segmentation of 3D sliced MRI data of the lumbar spine. Our method achieves an impressive accuracy of 99.5\% by incorporating novel masking logic, thus significantly advancing the state-of-the-art in vertebral segmentation and labeling. This contributes to more precise and reliable diagnosis and treatment planning.
CRNov 1, 2021
FuCE: Fuzzing+Concolic Execution guided Trojan Detection in Synthesizable Hardware DesignsMukta Debnath, Animesh Basak Chowdhury, Debasri Saha et al.
High-level synthesis (HLS) is the next emerging trend for designing complex customized architectures for applications such as Machine Learning, Video Processing. It provides a higher level of abstraction and freedom to hardware engineers to perform hardware software co-design. However, it opens up a new gateway to attackers to insert hardware trojans. Such trojans are semantically more meaningful and stealthy, compared to gate-level trojans and therefore are hard-to-detect using state-of-the-art gate-level trojan detection techniques. Although recent works have proposed detection mechanisms to uncover such stealthy trojans in high-level synthesis (HLS) designs, these techniques are either specially curated for existing trojan benchmarks or may run into scalability issues for large designs. In this work, we leverage the power of greybox fuzzing combined with concolic execution to explore deeper segments of design and uncover stealthy trojans. Experimental results show that our proposed framework is able to automatically detect trojans faster with fewer test cases, while attaining notable branch coverage, without any manual pre-processing analysis.